vOTU vOTU-010410

vOTU: vOTU-010410

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-010410
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vSUBGEN-20980 → vOTU-010410
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2129953
Biosample ID	N/A
Genome length (bp)	33,614 bps
CheckV completeness	96.49% (High-quality)
CDS count	48
CDS density	93.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	287	Host agreement	96.52
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	99	Host agreement	96.97

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 96.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2129953_1	K07504	282.9	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-2129953_1	phrog_4225	295.5	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2129953_1	UniRef90_UPI001958FD57	291.0	0	type I restriction endonuclease	N/A
eggNOG-mapper	UHGV-2129953_1	742738.HMPREF9460_04035	299.0	0	Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-2129953_1	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-2129953_1	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_1	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
KOfam	UHGV-2129953_2	K14059	222.2	0	int; integrase	N/A
PHROG	UHGV-2129953_2	phrog_1	197.3	0	integrase	integration and excision
UniRef90	UHGV-2129953_2	UniRef90_UPI001958A27A	206.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2129953_2	1203606.HMPREF1526_00215	161.0	2.08793e-43	Phage integrase family	N/A
Pfam	UHGV-2129953_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2129953_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2129953_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2129953_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_3	phrog_5978	162.2	0	N/A	unknown function
UniRef90	UHGV-2129953_3	UniRef90_A0A372UZA0	445.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-2129953_3	936375.HMPREF1152_1541	314.0	0	Filamentation induced by cAMP protein fic	N/A
Pfam	UHGV-2129953_3	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-2129953_3	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-2129953_3	PF07183,MF_01911,NF040876,COG3177	N/A	N/A	N/A	N/A
KOfam	UHGV-2129953_5	K23779	51.5	0.000000000000024	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-2129953_5	phrog_1373	41.7	0.000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-2129953_5	UniRef90_UPI00051ABD2F	84.0	4.19e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2129953_5	1280688.AUJB01000009_gene1936	58.2	0.00000000691	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2129953_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2129953_5	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-2129953_6	PF05973,TIGR02683,COG4683	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_7	PF21227	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_8	phrog_4611	61.0	1.3e-17	minor head protein	head and packaging
UniRef90	UHGV-2129953_8	UniRef90_UPI001EDE047F	157.0	2.59002e-41	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2129953_8	679192.HMPREF9013_1325	82.0	0.00000000000000172	N/A	N/A
Pfam	UHGV-2129953_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
PHROG	UHGV-2129953_9	phrog_1914	97.4	3.1e-29	N/A	unknown function
UniRef90	UHGV-2129953_9	UniRef90_R6DVV5	232.0	0	Predicted Zn peptidase	N/A
eggNOG-mapper	UHGV-2129953_9	1160721.RBI_I01604	138.0	8.53e-39	N/A	N/A
Pfam	UHGV-2129953_9	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2129953_9	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2129953_9	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-2129953_11	UniRef90_A0A1Y4RCY6	78.2	9.67e-18	N/A	N/A
eggNOG-mapper	UHGV-2129953_11	445974.CLORAM_02965	74.7	4.69e-17	N/A	N/A
Pfam	UHGV-2129953_11	PF20432	N/A	N/A	Antitoxin Xre-like helix-turn-helix domain	Xre-like-HTH
structural_annotation	UHGV-2129953_11	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_13	phrog_3240	75.6	6e-22	N/A	unknown function
eggNOG-mapper	UHGV-2129953_13	320841.Q4ZC34_9CAUD	57.0	0.00000000143	N/A	N/A
KOfam	UHGV-2129953_17	K06284	118.9	2.7e-35	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-2129953_17	phrog_4681	102.0	2.2e-30	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2129953_17	UniRef90_UPI000374C2E3	109.0	1.37e-29	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-2129953_17	1157490.EL26_11905	108.0	8.11e-30	Antidote-toxin recognition MazE, bacterial antitoxin	N/A
Pfam	UHGV-2129953_17	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-2129953_17	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-2129953_17	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-2129953_17	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_20	phrog_3584	130.2	1.5e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2129953_20	411470.RUMGNA_02047	133.0	1.7e-34	N/A	N/A
structural_annotation	UHGV-2129953_20	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-2129953_21	K03700	98.4	8.2e-29	recU; recombination protein U	N/A
PHROG	UHGV-2129953_21	phrog_843	142.3	1.49939e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2129953_21	UniRef90_A0A1H0W5Y9	174.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-2129953_21	537013.CLOSTMETH_01720	155.0	2.8026e-45	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-2129953_21	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-2129953_21	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-2129953_21	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2129953_22	1232449.BAHV02000016_gene1829	136.0	2.41e-39	N/A	N/A
KOfam	UHGV-2129953_23	K00558	222.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2129953_23	phrog_116	259.6	0	DNA methyltransferase	other
UniRef90	UHGV-2129953_23	UniRef90_A0A350THX9	724.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2129953_23	1121334.KB911073_gene1852	607.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-2129953_23	MTase_II_00020	97.0	5.2e-31	Type II methyltransferase	RM
Pfam	UHGV-2129953_23	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2129953_23	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2129953_23	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_24	phrog_5781	71.6	1e-20	N/A	unknown function
UniRef90	UHGV-2129953_24	UniRef90_A0A810Q4L2	110.0	1.63e-28	N/A	N/A
eggNOG-mapper	UHGV-2129953_24	573061.Clocel_3558	79.7	5.42e-17	N/A	N/A
Pfam	UHGV-2129953_24	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2129953_24	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2129953_24	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_25	phrog_36	62.2	9.8e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2129953_25	428125.CLOLEP_01806	103.0	2.64e-26	N/A	N/A
Pfam	UHGV-2129953_25	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-2129953_25	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_26	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-2129953_27	K06909	394.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2129953_27	phrog_5653	147.6	6.86636e-44	terminase large subunit	head and packaging
UniRef90	UHGV-2129953_27	UniRef90_A0A416S378	630.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2129953_27	33035.JPJF01000106_gene3136	593.0	0	Terminase small subunit	N/A
Pfam	UHGV-2129953_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-2129953_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2129953_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2129953_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2129953_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2129953_27	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_28	phrog_1233	94.4	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-2129953_28	1415774.U728_832	92.8	5.28e-23	N/A	N/A
structural_annotation	UHGV-2129953_28	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_29	phrog_533	214.9	0	portal protein	head and packaging
UniRef90	UHGV-2129953_29	UniRef90_A0A173TY48	344.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2129953_29	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2129953_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_30	phrog_581	247.6	0	minor head protein	head and packaging
UniRef90	UHGV-2129953_30	UniRef90_A0A3D4T830	344.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2129953_30	476272.RUMHYD_01761	222.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2129953_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2129953_30	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-2129953_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_30	PF06152,PF21814	N/A	N/A	N/A	N/A
UniRef90	UHGV-2129953_31	UniRef90_UPI000C08D045	48.1	0.00000579	N/A	N/A
PHROG	UHGV-2129953_32	phrog_194	42.7	0.0000000000095	head scaffolding protein	head and packaging
UniRef90	UHGV-2129953_32	UniRef90_UPI001C0EBA51	127.0	3.38e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2129953_32	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-2129953_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2129953_32	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_33	phrog_267	54.7	0.0000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-2129953_33	1235799.C818_04223	159.0	2.10195e-44	N/A	N/A
structural_annotation	UHGV-2129953_33	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_34	phrog_541	68.7	7.5e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-2129953_34	476272.RUMHYD_01778	74.3	0.0000000000000111	N/A	N/A
PHROG	UHGV-2129953_35	phrog_3366	51.1	0.000000000000024	N/A	unknown function
structural_annotation	UHGV-2129953_35	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_36	phrog_556	63.2	7e-19	minor head protein	head and packaging
UniRef90	UHGV-2129953_36	UniRef90_A0A1H7MNM8	117.0	1.14e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2129953_36	476272.RUMHYD_01780	116.0	2.11e-31	N/A	N/A
Pfam	UHGV-2129953_36	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2129953_36	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_37	phrog_3266	64.8	1.1e-18	tail completion	connector
eggNOG-mapper	UHGV-2129953_37	476272.RUMHYD_01781	120.0	2.72e-32	N/A	N/A
structural_annotation	UHGV-2129953_37	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_38	phrog_3099	91.1	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-2129953_38	693746.OBV_18150	227.0	0	N/A	N/A
structural_annotation	UHGV-2129953_38	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_39	phrog_11299	99.6	2.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-2129953_39	1449050.JNLE01000003_gene3883	65.9	0.0000000000146	N/A	N/A
structural_annotation	UHGV-2129953_39	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_40	phrog_706	111.1	9.1e-33	N/A	unknown function
UniRef90	UHGV-2129953_40	UniRef90_UPI00164D7633	178.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2129953_40	693746.OBV_18170	171.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2129953_40	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2129953_40	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_41	phrog_1535	136.4	0	tail length tape measure protein	tail
UniRef90	UHGV-2129953_41	UniRef90_A0A810PX76	103.0	1.78e-19	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2129953_41	1449050.JNLE01000003_gene3881	136.0	1.31e-30	domain protein	N/A
COG	UHGV-2129953_41	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_43	phrog_6616	55.4	2.5e-17	tail protein	tail
structural_annotation	UHGV-2129953_43	PF13550,PF09931,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_44	PF20622,NF032891	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2129953_45	411471.SUBVAR_06929	305.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-2129953_45	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
KOfam	UHGV-2129953_46	K20846	67.5	9.8e-20	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-2129953_46	phrog_215	86.7	4.9e-25	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-2129953_46	203275.BFO_0575	84.7	0.0000000000000307	Bacterial group 2 Ig-like protein	N/A
Pfam	UHGV-2129953_46	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-2129953_46	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2129953_46	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-2129953_47	K01447	126.7	2.6e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2129953_47	phrog_9611	142.5	2.49992e-42	endolysin	lysis
UniRef90	UHGV-2129953_47	UniRef90_A0A3D1VCL7	458.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-2129953_47	97138.C820_00738	245.0	0	Ami_2	N/A
Pfam	UHGV-2129953_47	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2129953_47	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-2129953_47	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-2129953_48	phrog_199	64.2	1.4e-18	holin	lysis
UniRef90	UHGV-2129953_48	UniRef90_A0A3D1VF24	279.0	0	Holin	N/A
eggNOG-mapper	UHGV-2129953_48	742738.HMPREF9460_01388	152.0	2.8026e-45	Bacteriophage holin family	N/A
Pfam	UHGV-2129953_48	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2129953_48	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2129953_48	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2129953_48	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2129953	Yes	33,614	56	96	1
UHGV-0116207	No	37,558	56	100	1
UHGV-0089225	No	32,628	56	94	1
UHGV-2048145	No	11,533	58	33	1