vOTU vOTU-010435

vOTU: vOTU-010435

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-010435
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00296 → vGENUS-00551 → vSUBGEN-05580 → vOTU-010435
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0146356
Biosample ID	SAMN05578585
Genome length (bp)	40,187 bps
CheckV completeness	99.90% (High-quality)
CDS count	62
CDS density	92.72%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus	Total connections	263	Host agreement	88.97
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus	Total connections	34	Host agreement	91.18

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0146356_1	COG4485	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_2	K12999	504.8	0	rgpI; glucosyltransferase [EC:2.4.1.-]	N/A
PHROG	UHGV-0146356_2	phrog_841	361.7	0	GtrB-like O-antigen conversion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0146356_2	UniRef90_R5TQS7	635.0	0	Glyco_trans_2-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_2	411468.CLOSCI_04014	517.0	0	PFAM glycosyl transferase family 2	N/A
Pfam	UHGV-0146356_2	PF00535	N/A	N/A	Glycosyl transferase family 2	Glycos_transf_2
COG	UHGV-0146356_2	COG0463	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A
structural_annotation	UHGV-0146356_2	PF00535,MF_01164,NF007986,COG1215	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_3	K01448	104.1	1.7e-30	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0146356_3	phrog_435	168.4	0	endolysin	lysis
UniRef90	UHGV-0146356_3	UniRef90_A0A2N5NRG3	526.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_3	411470.RUMGNA_02814	528.0	0	Ami_3	N/A
Pfam	UHGV-0146356_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0146356_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0146356_3	PF01520,MF_00417,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_5	phrog_10091	98.6	5.8e-29	holin	lysis
UniRef90	UHGV-0146356_5	UniRef90_A0A2N5P008	157.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0146356_5	428127.EUBDOL_01206	120.0	8.2e-35	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0146356_5	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0146356_5	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0146356_5	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0146356_5	COG5546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0146356_6	608534.GCWU000341_02271	53.9	0.0000000432	N/A	N/A
KOfam	UHGV-0146356_7	K16628	104.0	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0146356_7	phrog_588	633.3	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-0146356_7	UniRef90_UPI000467D60B	1244.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0146356_7	411470.RUMGNA_02230	913.0	0	N/A	N/A
Pfam	UHGV-0146356_7	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0146356_7	PF21470	N/A	N/A	Minor structural protein 5-like, C-terminal domain	BppU-like_C
structural_annotation	UHGV-0146356_7	PF14594,PF08931,PF13895,TIGR01665,TIGR04488,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_8	phrog_202	335.5	0	distal tail protein Dit	tail
UniRef90	UHGV-0146356_8	UniRef90_A0A3E4V7T4	981.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0146356_8	411470.RUMGNA_02229	716.0	0	N/A	N/A
Pfam	UHGV-0146356_8	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0146356_8	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0146356_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0146356_8	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_9	K10421	42.6	0.0000000000039	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0146356_9	phrog_5755	373.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0146356_9	UniRef90_A0A3E4V829	1761.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0146356_9	1232453.BAIF02000028_gene2732	820.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0146356_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-0146356_9	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0146356_9	COG3953	N/A	N/A	SLT domain protein	N/A
structural_annotation	UHGV-0146356_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_10	phrog_709	142.4	1.49939e-42	N/A	unknown function
UniRef90	UHGV-0146356_10	UniRef90_A0A0D6DV15	127.0	1.74e-35	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-0146356_10	1232453.BAIF02000028_gene2730	171.0	0	N/A	N/A
structural_annotation	UHGV-0146356_10	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_11	phrog_88	151.1	5.60519e-45	major tail protein	tail
UniRef90	UHGV-0146356_11	UniRef90_A0A3E4V8A6	370.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0146356_11	1232453.BAIF02000028_gene2729	275.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0146356_11	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0146356_11	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_12	phrog_78	55.7	0.0000000000000011	tail terminator	connector
UniRef90	UHGV-0146356_12	UniRef90_A0A0D6DV47	107.0	4.65e-27	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-0146356_12	272623.L59277	114.0	1.6e-31	N/A	N/A
structural_annotation	UHGV-0146356_12	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_13	phrog_5	41.4	0.00000000004	tail completion or Neck1 protein	connector
UniRef90	UHGV-0146356_13	UniRef90_UPI000465037A	201.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0146356_13	1158604.I591_01763	100.0	8.62e-26	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0146356_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0146356_13	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_14	phrog_1951	106.1	1.7e-31	head-tail adaptor	connector
UniRef90	UHGV-0146356_14	UniRef90_UPI001D057432	202.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-0146356_14	1232453.BAIF02000028_gene2726	131.0	1.57e-38	N/A	N/A
NCBIFam	UHGV-0146356_14	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0146356_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_15	phrog_2550	87.0	1.1e-25	N/A	unknown function
UniRef90	UHGV-0146356_15	UniRef90_A0A3E3JYI5	113.0	6.16e-31	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0146356_15	1232453.BAIF02000028_gene2725	111.0	8.97e-31	N/A	N/A
structural_annotation	UHGV-0146356_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_16	phrog_10972	51.0	0.000000000000024	tail fiber protein	tail
UniRef90	UHGV-0146356_16	UniRef90_UPI001D05A857	142.0	8.92067e-42	head fiber protein	N/A
eggNOG-mapper	UHGV-0146356_16	1232443.BAIA02000078_gene28	65.9	0.00000000000312	domain, Protein	N/A
Pfam	UHGV-0146356_16	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
COG	UHGV-0146356_16	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0146356_17	phrog_10	180.9	0	major head protein	head and packaging
UniRef90	UHGV-0146356_17	UniRef90_A0A415S777	653.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0146356_17	1232453.BAIF02000028_gene2723	488.0	0	capsid protein	N/A
Pfam	UHGV-0146356_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0146356_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0146356_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0146356_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_18	K06904	161.4	0	N/A	N/A
PHROG	UHGV-0146356_18	phrog_80	184.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0146356_18	UniRef90_A0A3E4V855	355.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0146356_18	1232453.BAIF02000028_gene2722	302.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0146356_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0146356_18	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0146356_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0146356_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_19	phrog_12	163.7	0	portal protein	head and packaging
UniRef90	UHGV-0146356_19	UniRef90_A0A3E4V862	775.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0146356_19	1232453.BAIF02000028_gene2721	626.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0146356_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0146356_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0146356_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0146356_19	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_21	phrog_9	292.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0146356_21	UniRef90_A0A3E4V817	1146.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0146356_21	1232453.BAIF02000028_gene2720	1043.0	0	Phage Terminase	N/A
Pfam	UHGV-0146356_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0146356_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0146356_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0146356_21	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_22	phrog_361	97.3	1.3e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0146356_22	UniRef90_UPI001D0DE0A6	181.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0146356_22	1158604.I591_01771	185.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0146356_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0146356_22	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0146356_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0146356_23	PF04320,MF_00360,NF008333,COG3171	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_24	phrog_119	81.5	1.1e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_24	UniRef90_A0A3E4V813	194.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0146356_24	1232453.BAIF02000028_gene2717	136.0	3.66e-40	HNH nucleases	N/A
COG	UHGV-0146356_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0146356_26	phrog_36	49.9	0.000000000000067	transcriptional regulator	transcription regulation
UniRef90	UHGV-0146356_26	UniRef90_A0A3E2UDC8	134.0	5.44e-38	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0146356_26	742740.HMPREF9474_03497	125.0	3.99e-35	N/A	N/A
structural_annotation	UHGV-0146356_26	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0146356_28	411470.RUMGNA_02203	274.0	0	N/A	N/A
PHROG	UHGV-0146356_30	phrog_374	204.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_30	UniRef90_R6H304	166.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_30	411462.DORLON_00791	166.0	0	N/A	N/A
structural_annotation	UHGV-0146356_30	PF17375	N/A	N/A	N/A	N/A
UniRef90	UHGV-0146356_31	UniRef90_A0A2N5PKF4	338.0	0	N/A	N/A
Pfam	UHGV-0146356_31	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0146356_31	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_33	phrog_599	42.7	0.000000000012	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0146356_33	UniRef90_U2DJA0	105.0	2.61e-28	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0146356_33	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0146356_33	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0146356_33	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_34	phrog_10714	43.0	0.0000000000023	N/A	unknown function
PHROG	UHGV-0146356_36	phrog_17690	162.2	0	N/A	unknown function
UniRef90	UHGV-0146356_36	UniRef90_A0A6L5XWF4	113.0	5.57e-30	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0146356_36	665950.HMPREF1025_02546	166.0	0	N/A	N/A
PHROG	UHGV-0146356_38	phrog_25488	187.4	0	N/A	unknown function
structural_annotation	UHGV-0146356_38	PF12844,PF01316,MF_00535,TIGR00270,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_39	phrog_2600	120.3	2.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0146356_39	1178540.BA70_18565	186.0	0	N/A	N/A
PHROG	UHGV-0146356_40	phrog_10469	199.6	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_40	UniRef90_A0A2N5PKG2	541.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_40	1291050.JAGE01000002_gene3381	171.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0146356_40	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0146356_40	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0146356_40	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_41	phrog_244	84.3	1.8e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0146356_41	887929.HMP0721_1279	127.0	2.65e-36	N/A	N/A
structural_annotation	UHGV-0146356_41	PF01870,MF_01490,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_42	K03111	99.0	8.4e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0146356_42	phrog_44	100.0	3.3e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_42	UniRef90_A0A2N5PKE3	260.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0146356_42	626523.GCWU000342_01558	134.0	2.35e-38	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0146356_42	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0146356_42	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0146356_42	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0146356_42	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0146356_42	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_43	K07455	206.9	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0146356_43	phrog_148	224.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_43	UniRef90_A0A2N5PKF9	534.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0146356_43	1095750.HMPREF9970_1675	376.0	0	RecT family	N/A
Pfam	UHGV-0146356_43	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0146356_43	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0146356_43	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0146356_43	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_44	phrog_674	179.9	0	N/A	unknown function
UniRef90	UHGV-0146356_44	UniRef90_UPI000462FA44	502.0	0	N/A	N/A
eggNOG-mapper	UHGV-0146356_44	1095750.HMPREF9970_1676	137.0	6.09e-36	N/A	N/A
Pfam	UHGV-0146356_44	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0146356_44	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_45	phrog_434	158.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146356_45	UniRef90_A0A2N5PKD7	469.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0146356_45	1095750.HMPREF9970_1677	249.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0146356_45	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0146356_45	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0146356_45	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0146356_45	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0146356_48	PF10743,NF040990,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_50	K07741	102.2	1.3e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0146356_50	phrog_373	127.4	1.3e-37	anti-repressor	transcription regulation
UniRef90	UHGV-0146356_50	UniRef90_A0A2N5P5D9	439.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_50	1408823.AXUS01000009_gene1978	196.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0146356_50	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0146356_50	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0146356_50	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_53	phrog_373	113.1	3.5e-33	anti-repressor	transcription regulation
UniRef90	UHGV-0146356_53	UniRef90_UPI000E4A5456	484.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0146356_53	1304866.K413DRAFT_3063	317.0	0	TIGRFAM phage regulatory protein, Rha family	N/A
Pfam	UHGV-0146356_53	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0146356_53	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0146356_53	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0146356_53	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_54	K22300	58.4	1.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0146356_54	phrog_3	48.8	0.00000000000032	transcriptional repressor	transcription regulation
UniRef90	UHGV-0146356_54	UniRef90_A0A412ELD4	108.0	1.36e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0146356_54	1256908.HMPREF0373_00646	70.9	0.0000000000000017	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0146356_54	retron_type_VI_hth_cluster2_1	44.2	0.0000000000054	N/A	Retron
Pfam	UHGV-0146356_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0146356_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0146356_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_55	phrog_2967	55.6	0.000000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0146356_55	UniRef90_A0A396QPY6	179.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0146356_55	476272.RUMHYD_03305	99.8	3.01e-24	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0146356_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0146356_55	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0146356_55	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_57	phrog_806	83.1	4e-24	N/A	unknown function
UniRef90	UHGV-0146356_57	UniRef90_A0A6I6BJA1	119.0	6.81e-31	Cell wall-binding protein	N/A
eggNOG-mapper	UHGV-0146356_57	931626.Awo_c29360	157.0	1.96182e-44	N/A	N/A
structural_annotation	UHGV-0146356_57	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0146356_58	phrog_10121	40.8	0.000000000035	N/A	unknown function
KOfam	UHGV-0146356_59	K14059	76.5	5.3e-22	int; integrase	N/A
PHROG	UHGV-0146356_59	phrog_1	104.6	1.4e-30	integrase	integration and excision
UniRef90	UHGV-0146356_59	UniRef90_A0A829NH64	744.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0146356_59	1232453.BAIF02000010_gene3323	404.0	0	Phage integrase family	N/A
Pfam	UHGV-0146356_59	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0146356_59	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0146356_59	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0146356_60	K02657	85.5	6.1e-25	pilG; twitching motility two-component system response regulator PilG	N/A
PHROG	UHGV-0146356_60	phrog_731	73.6	2.4e-21	N/A	unknown function
UniRef90	UHGV-0146356_60	UniRef90_R5UA45	192.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-0146356_60	1256908.HMPREF0373_02212	89.4	1.56e-20	Transcriptional regulatory protein, C terminal	N/A
Pfam	UHGV-0146356_60	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
COG	UHGV-0146356_60	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
KOfam	UHGV-0146356_61	K18349	48.3	0.00000000000011	vanRC, vanRE, vanRG; two-component system, OmpR family, response regulator VanR	N/A
PHROG	UHGV-0146356_61	phrog_731	42.9	0.0000000000052	N/A	unknown function
eggNOG-mapper	UHGV-0146356_61	556261.HMPREF0240_03435	85.9	4.74e-18	response regulator, receiver	N/A
COG	UHGV-0146356_61	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
eggNOG-mapper	UHGV-0146356_62	658655.HMPREF0988_01554	62.8	0.00000000308	Histidine kinase-like ATPases	N/A
COG	UHGV-0146356_62	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0146356	Yes	40,187	42	100	1
UHGV-0234759	No	35,711	42	95	1
UHGV-0144386	No	35,616	42	95	1
UHGV-1699021	No	12,926	43	35	1
UHGV-0311681	No	10,241	39	27	1