vOTU vOTU-010771

vOTU: vOTU-010771

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-010771
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00226 → vGENUS-00138 → vSUBGEN-39627 → vOTU-010771
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0278828
Biosample ID	SAMN06233224
Genome length (bp)	43,477 bps
CheckV completeness	93.37% (High-quality)
CDS count	59
CDS density	90.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	547	Host agreement	83.55
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	88	Host agreement	73.86

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0278828_1	K14059	128.9	6.8e-38	int; integrase	N/A
PHROG	UHGV-0278828_1	phrog_1	141.5	8.39938e-42	integrase	integration and excision
UniRef90	UHGV-0278828_1	UniRef90_R6X1Y3	671.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0278828_1	1123250.KB908381_gene1631	337.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0278828_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0278828_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0278828_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_4	K18830	63.8	4.3e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0278828_4	phrog_8	45.9	0.00000000000095	transcriptional regulator	transcription regulation
UniRef90	UHGV-0278828_4	UniRef90_R6X1Y8	181.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0278828_4	641107.CDLVIII_1309	90.1	1.08e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0278828_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0278828_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0278828_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_7	phrog_6058	75.2	5.5e-22	N/A	unknown function
UniRef90	UHGV-0278828_7	UniRef90_A0A0U9H7T0	57.0	0.00000000325	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-0278828_7	1280689.AUJC01000011_gene1497	66.2	0.000000000000139	N/A	N/A
structural_annotation	UHGV-0278828_7	PF12728,TIGR01764	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278828_8	NF041909	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_9	phrog_14367	71.4	7e-21	N/A	unknown function
UniRef90	UHGV-0278828_9	UniRef90_R6WTN1	202.0	0	Peptidoglycan-binding LysM	N/A
Pfam	UHGV-0278828_9	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0278828_9	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0278828_9	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_11	phrog_434	335.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278828_11	UniRef90_R6WGP6	638.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-0278828_11	706434.HMPREF9429_00551	362.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-0278828_11	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0278828_11	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0278828_11	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0278828_11	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_12	K22299	42.0	0.000000000021	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0278828_12	UniRef90_R6WLK2	127.0	1.54e-36	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0278828_12	429009.Adeg_0117	48.9	0.00000377	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0278828_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0278828_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0278828_12	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_14	K07455	177.5	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0278828_14	phrog_148	180.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278828_14	UniRef90_R6XVK6	388.0	0	Putative phage RecT family protein	N/A
eggNOG-mapper	UHGV-0278828_14	1234664.AMRO01000024_gene1791	171.0	0	RecT family	N/A
Pfam	UHGV-0278828_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0278828_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0278828_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0278828_14	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_15	phrog_4880	143.4	1.60028e-42	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278828_15	UniRef90_R6WTP4	474.0	0	N-terminal phage replisome organizer	N/A
eggNOG-mapper	UHGV-0278828_15	1178540.BA70_18625	130.0	2.96e-33	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0278828_15	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0278828_15	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0278828_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0278828_15	PF09681,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_19	phrog_10714	85.1	6.6e-25	N/A	unknown function
structural_annotation	UHGV-0278828_19	PF21173	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_20	phrog_3878	73.5	3.2e-21	N/A	unknown function
PHROG	UHGV-0278828_22	phrog_2776	65.5	7.4e-19	N/A	unknown function
UniRef90	UHGV-0278828_22	UniRef90_A0A2S7ZCT0	96.3	3.04e-22	DNA repair protein MmcB-related protein	N/A
Pfam	UHGV-0278828_22	PF06319	N/A	N/A	DNA repair protein MmcB-like	MmcB-like
structural_annotation	UHGV-0278828_22	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278828_24	PF16857,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_26	K01160	61.8	2e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0278828_26	phrog_140	138.2	4.19997e-41	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278828_26	UniRef90_A0A316S9J1	146.0	1.5106e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0278828_26	160799.PBOR_24230	121.0	2.05e-33	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0278828_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0278828_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0278828_26	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_27	K03111	55.7	0.0000000000000014	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0278828_27	phrog_44	59.1	1.3e-16	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278828_27	UniRef90_R6WGR4	252.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0278828_27	546268.NEISUBOT_05135	65.9	0.00000000000549	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0278828_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0278828_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0278828_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0278828_27	PF00436,MF_00984,TIGR00621,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0278828_34	K06909	86.8	3e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0278828_34	phrog_2	159.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0278828_34	UniRef90_UPI001D00EC11	407.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0278828_34	568816.Acin_1836	420.0	0	Terminase RNaseH-like domain	N/A
Pfam	UHGV-0278828_34	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0278828_34	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0278828_34	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_36	phrog_332	430.1	0	head-tail adaptor	connector
UniRef90	UHGV-0278828_36	UniRef90_UPI001F3F9DD9	547.0	0	portal protein	N/A
eggNOG-mapper	UHGV-0278828_36	568816.Acin_1834	603.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-0278828_36	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-0278828_36	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_37	phrog_528	105.7	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0278828_37	1401067.HMPREF0872_06805	94.0	3.39e-23	N/A	N/A
PHROG	UHGV-0278828_38	phrog_458	151.2	8.40779e-45	protease	other
eggNOG-mapper	UHGV-0278828_38	568816.Acin_1832	98.2	1.86e-22	N/A	N/A
PHROG	UHGV-0278828_39	phrog_212	204.7	0	major head protein	head and packaging
UniRef90	UHGV-0278828_39	UniRef90_A0A6J5KPX9	215.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0278828_39	568816.Acin_1831	351.0	0	N/A	N/A
Pfam	UHGV-0278828_39	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0278828_39	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_40	phrog_427	64.7	1.5e-18	N/A	unknown function
structural_annotation	UHGV-0278828_40	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_41	phrog_394	156.7	0	tail protein	tail
UniRef90	UHGV-0278828_41	UniRef90_A0A0U1KW64	128.0	5.77e-34	N/A	N/A
eggNOG-mapper	UHGV-0278828_41	1401067.HMPREF0872_06780	148.0	2.65966e-42	N/A	N/A
structural_annotation	UHGV-0278828_41	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_42	phrog_376	608.3	0	tail protein	tail
UniRef90	UHGV-0278828_42	UniRef90_A0A0U1KV93	354.0	0	N/A	N/A
eggNOG-mapper	UHGV-0278828_42	568816.Acin_1828	659.0	0	N/A	N/A
structural_annotation	UHGV-0278828_42	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_43	phrog_308	106.7	1.9e-31	internal virion protein	head and packaging
structural_annotation	UHGV-0278828_43	PF13420,MF_02210,NF011709,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_44	phrog_418	130.9	2.9e-39	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0278828_44	568816.Acin_1826	103.0	1.07e-24	N/A	N/A
structural_annotation	UHGV-0278828_44	PF16789,TIGR02971,COG3524	N/A	N/A	N/A	N/A
UniRef90	UHGV-0278828_45	UniRef90_A0A1Q6RQM5	1021.0	0	SLT domain-containing protein	N/A
COG	UHGV-0278828_45	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0278828_45	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_46	phrog_9880	539.9	0	N/A	unknown function
UniRef90	UHGV-0278828_46	UniRef90_A0A1Q6RQR6	4599.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0278828_46	1123288.SOV_1c10750	184.0	1.37327e-43	N/A	N/A
Pfam	UHGV-0278828_46	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
PHROG	UHGV-0278828_48	phrog_32960	57.0	4.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0278828_48	1123288.SOV_1c10770	81.3	0.000000000000707	Right handed beta helix region	N/A
COG	UHGV-0278828_48	COG5434	N/A	N/A	Polygalacturonase	N/A
PHROG	UHGV-0278828_50	phrog_4105	82.8	3.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0278828_50	33035.JPJF01000043_gene996	79.0	2.17e-17	N/A	N/A
eggNOG-mapper	UHGV-0278828_52	1392502.JNIO01000008_gene1280	226.0	0	N/A	N/A
structural_annotation	UHGV-0278828_52	PF21277	N/A	N/A	N/A	N/A
UniRef90	UHGV-0278828_56	UniRef90_A0A316S6W0	102.0	8.78e-27	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-0278828_56	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0278828_56	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0278828_56	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0278828_57	phrog_21718	44.0	0.0000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0278828_58	476272.RUMHYD_01953	49.7	0.00000062	N/A	N/A
PHROG	UHGV-0278828_59	phrog_16490	84.7	4.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0278828_59	445972.ANACOL_01880	79.3	0.00000000000000667	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0278828	Yes	43,477	45	93	1
UHGV-0166020	No	42,822	45	92	1