vOTU vOTU-011712

vOTU: vOTU-011712

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-011712
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Rockefellervirus
Taxonomy (UHGV)	vFAM-00052 → vSUBFAM-00064 → vGENUS-00192 → vSUBGEN-17873 → vOTU-011712
Host lineage	Bacteria → Firmicutes → Bacilli → Staphylococcales → Staphylococcaceae → Staphylococcus → Staphylococcus epidermidis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0228054
Biosample ID	SAMEA4413039
Genome length (bp)	43,971 bps
CheckV completeness	99.90% (High-quality)
CDS count	67
CDS density	92.70%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Staphylococcales → Staphylococcaceae → Staphylococcus → Staphylococcus epidermidis	Total connections	58	Host agreement	98.28
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Staphylococcales → Staphylococcaceae → Staphylococcus → Staphylococcus epidermidis	Total connections	245	Host agreement	99.18

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0228054_2	K01448	69.3	5.9e-20	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0228054_2	phrog_489	703.7	0	endolysin	lysis
UniRef90	UHGV-0228054_2	UniRef90_A0A2H4JCA1	900.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_2	1034809.SLUG_08860	825.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0228054_2	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0228054_2	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0228054_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0228054_2	PF08460,PF01520,TIGR02883,NF033202,COG0860,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_3	phrog_263	101.9	2.6e-30	holin	lysis
UniRef90	UHGV-0228054_3	UniRef90_D4FN21	181.0	0	Holin, SPP1 family	N/A
eggNOG-mapper	UHGV-0228054_3	399185.A1BU76_9CAUD	158.0	0	Pfam:Holin_SPP1	N/A
Pfam	UHGV-0228054_3	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0228054_3	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0228054_3	PF04688	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_4	phrog_134	54.1	0.000000000000002	N/A	unknown function
UniRef90	UHGV-0228054_4	UniRef90_A0A5E9M9B6	99.8	8.62e-27	XkdX family protein	N/A
Pfam	UHGV-0228054_4	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0228054_4	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0228054_4	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_5	phrog_1766	122.2	2.6e-36	tail fiber protein	tail
eggNOG-mapper	UHGV-0228054_5	435838.HMPREF0786_00853	105.0	4.8e-28	N/A	N/A
PHROG	UHGV-0228054_6	phrog_18372	254.8	0	tail fiber protein	tail
UniRef90	UHGV-0228054_6	UniRef90_A0A8E4MQV8	644.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_6	698737.SLGD_02237	293.0	0	GDSL-like Lipase/Acylhydrolase family	N/A
Pfam	UHGV-0228054_6	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0228054_6	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-0228054_6	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_7	K23989	289.6	0	lytD, lytB; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]	N/A
PHROG	UHGV-0228054_7	phrog_759	1074.5	0	tail associated cell-wall hydrolase	other
UniRef90	UHGV-0228054_7	UniRef90_D4FN15	1131.0	0	CHAP domain protein	N/A
eggNOG-mapper	UHGV-0228054_7	398839.A1BTX6_9CAUD	1116.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0228054_7	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0228054_7	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
structural_annotation	UHGV-0228054_7	PF01832,PF01510,NF008096,COG4193,COG3942,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_8	phrog_276	149.7	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0228054_8	UniRef90_UPI00145ABD88	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0228054_8	698737.SLGD_02238	134.0	8.75999e-40	N/A	N/A
Pfam	UHGV-0228054_8	PF11166	N/A	N/A	N/A	DUF2951
PHROG	UHGV-0228054_9	phrog_134	54.3	0.0000000000000017	N/A	unknown function
UniRef90	UHGV-0228054_9	UniRef90_D4FN12	93.6	2.1e-24	Putative XkdX family protein	N/A
eggNOG-mapper	UHGV-0228054_9	1194526.A284_07805	50.8	0.0000000313	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0228054_9	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0228054_9	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_10	phrog_1766	99.8	2.3e-29	tail fiber protein	tail
UniRef90	UHGV-0228054_10	UniRef90_A1BU70	225.0	0	Conserved phage protein	N/A
eggNOG-mapper	UHGV-0228054_10	279808.SH2340	110.0	9.01e-30	N/A	N/A
PHROG	UHGV-0228054_11	phrog_257	421.7	0	minor tail protein	tail
UniRef90	UHGV-0228054_11	UniRef90_D4FN10	917.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_11	279808.SH2341	410.0	0	N/A	N/A
Pfam	UHGV-0228054_11	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0228054_11	PF10651,PF08931	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_12	phrog_4775	1548.8	0	pre-neck appendage protein	connector
UniRef90	UHGV-0228054_12	UniRef90_A1BU68	1639.0	0	Putative phage pre-neck appendage protein	N/A
eggNOG-mapper	UHGV-0228054_12	279808.SH2342	1228.0	0	Peptidase_G2, IMC autoproteolytic cleavage domain	N/A
Pfam	UHGV-0228054_12	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
Pfam	UHGV-0228054_12	PF11962	N/A	N/A	Peptidase_G2, IMC autoproteolytic cleavage domain	Peptidase_G2
COG	UHGV-0228054_12	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0228054_12	PF11962,PF00295,TIGR03808,COG5434	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_13	K10804	59.8	4.1e-17	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0228054_13	phrog_663	1113.5	0	minor head protein	head and packaging
UniRef90	UHGV-0228054_13	UniRef90_I6TFU2	1196.0	0	Virion associated hydrolase	N/A
eggNOG-mapper	UHGV-0228054_13	279808.SH2343	876.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0228054_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0228054_13	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0228054_13	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0228054_14	phrog_28208	125.7	9e-38	tail protein	tail
UniRef90	UHGV-0228054_14	UniRef90_A1BTW9	608.0	0	Conserved phage protein	N/A
eggNOG-mapper	UHGV-0228054_14	279808.SH2344	402.0	0	Phage tail protein	N/A
PHROG	UHGV-0228054_15	phrog_37657	536.7	0	N/A	unknown function
UniRef90	UHGV-0228054_15	UniRef90_A1BU65	1310.0	0	Putative phage tape measure protein	N/A
PHROG	UHGV-0228054_16	phrog_1404	130.9	3.5e-39	tail protein	tail
UniRef90	UHGV-0228054_16	UniRef90_A0A2Z4WNG6	115.0	2.45e-31	N/A	N/A
eggNOG-mapper	UHGV-0228054_16	279808.SH2346	84.3	6.07e-20	N/A	N/A
PHROG	UHGV-0228054_17	phrog_31021	186.7	0	tail assembly chaperone	tail
UniRef90	UHGV-0228054_17	UniRef90_A1BTW6	321.0	0	Conserved phage protein	N/A
eggNOG-mapper	UHGV-0228054_17	279808.SH2347	227.0	0	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0228054_17	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0228054_17	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_18	phrog_238	146.5	9.24857e-44	major tail protein	tail
UniRef90	UHGV-0228054_18	UniRef90_A0A2T4Q024	323.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0228054_18	279808.SH2348	186.0	0	domain, Protein	N/A
COG	UHGV-0228054_18	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228054_18	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_19	phrog_176	140.5	5.09933e-42	tail terminator	connector
UniRef90	UHGV-0228054_19	UniRef90_A0A5R1C3F0	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-0228054_19	106284.Q9FZZ6_9CAUD	271.0	0	N/A	N/A
Pfam	UHGV-0228054_19	PF11367	N/A	N/A	N/A	DUF3168
PHROG	UHGV-0228054_20	phrog_374	209.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0228054_20	86416.Clopa_4295	173.0	0	N/A	N/A
PHROG	UHGV-0228054_21	phrog_5	45.2	0.0000000000023	tail completion or Neck1 protein	connector
UniRef90	UHGV-0228054_21	UniRef90_UPI000A5DF439	192.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0228054_21	1141106.CAIB01000278_gene2575	108.0	5.41e-29	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0228054_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UniRef90	UHGV-0228054_22	UniRef90_I6SMK9	221.0	0	Head tail adaptor	N/A
eggNOG-mapper	UHGV-0228054_22	1280.SAXN108_1927	157.0	0	N/A	N/A
NCBIFam	UHGV-0228054_22	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0228054_22	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_23	phrog_1161	143.4	4.49817e-43	head-tail adaptor	connector
UniRef90	UHGV-0228054_23	UniRef90_A0A0M2NNW2	170.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0228054_23	279808.SH2352	141.0	1.62971e-42	N/A	N/A
Pfam	UHGV-0228054_23	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0228054_23	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_24	phrog_390	121.9	2.1e-36	Arc-like repressor	transcription regulation
UniRef90	UHGV-0228054_24	UniRef90_A1BU57	174.0	0	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_24	1197953.I6T7M8_9CAUD	182.0	0	DNA-dependent transcription, termination	N/A
Pfam	UHGV-0228054_24	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
PHROG	UHGV-0228054_25	phrog_544	346.0	0	major head protein	head and packaging
UniRef90	UHGV-0228054_25	UniRef90_A0A5B2YT70	479.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0228054_25	1197953.I6TG23_9CAUD	528.0	0	peptidase activity	N/A
NCBIFam	UHGV-0228054_25	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0228054_25	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_26	phrog_194	140.9	8.2004e-42	head scaffolding protein	head and packaging
UniRef90	UHGV-0228054_26	UniRef90_A1BU55	303.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0228054_26	399185.A1BU55_9CAUD	303.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0228054_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0228054_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_27	phrog_2881	115.0	2.6e-34	dCMP hydroxymethylase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_27	UniRef90_A0A0M2NR64	89.0	6.19e-22	Phage tail length tape-measure protein	N/A
PHROG	UHGV-0228054_28	phrog_115	214.6	0	minor head protein	head and packaging
UniRef90	UHGV-0228054_28	UniRef90_A1BU54	596.0	0	Putative phage head protein	N/A
eggNOG-mapper	UHGV-0228054_28	1280.SAXN108_1933	480.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0228054_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0228054_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0228054_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0228054_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_29	phrog_64	393.4	0	portal protein	head and packaging
UniRef90	UHGV-0228054_29	UniRef90_I6TFS7	952.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0228054_29	1405498.SSIM_04875	757.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0228054_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0228054_29	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0228054_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_30	K06909	440.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0228054_30	phrog_3717	228.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0228054_30	UniRef90_A0A7U0GDK7	844.0	0	Terminase, large subunit	N/A
eggNOG-mapper	UHGV-0228054_30	398839.A1BTV3_9CAUD	848.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0228054_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0228054_30	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0228054_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
HAMAP	UHGV-0228054_30	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0228054_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_31	K07474	118.1	1.4e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0228054_31	phrog_51	132.7	2.3e-39	terminase small subunit	head and packaging
UniRef90	UHGV-0228054_31	UniRef90_A1BU50	251.0	0	Putative small terminase subunit	N/A
eggNOG-mapper	UHGV-0228054_31	320840.Q4ZCF3_9CAUD	173.0	0	Terminase small subunit	N/A
Pfam	UHGV-0228054_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0228054_31	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_32	phrog_1058	168.6	0	N/A	unknown function
UniRef90	UHGV-0228054_32	UniRef90_A0A380GAE8	205.0	0	Putative phi PVL-like protein	N/A
eggNOG-mapper	UHGV-0228054_32	1280.SAXN108_1937	223.0	0	N/A	N/A
PHROG	UHGV-0228054_33	phrog_1367	83.7	9.8e-25	N/A	unknown function
PHROG	UHGV-0228054_34	phrog_2409	203.7	0	N/A	unknown function
UniRef90	UHGV-0228054_34	UniRef90_Q4ZDW4	88.6	3.96e-20	ORF044	N/A
PHROG	UHGV-0228054_35	phrog_19192	129.2	1.1e-38	N/A	unknown function
UniRef90	UHGV-0228054_35	UniRef90_I6T7M0	125.0	1.51e-36	RinB	N/A
eggNOG-mapper	UHGV-0228054_35	525378.HMPREF0793_1865	84.0	5.08e-21	Transcriptional activator RinB	N/A
Pfam	UHGV-0228054_35	PF06116	N/A	N/A	Transcriptional activator RinB	RinB
KOfam	UHGV-0228054_36	K01520	144.9	5.70328e-43	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0228054_36	phrog_135	137.0	8.39994e-41	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_36	UniRef90_A0A6A2CCZ5	272.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0228054_36	399185.A1BUB1_9CAUD	272.0	0	dUTPase	N/A
Pfam	UHGV-0228054_36	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0228054_36	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
structural_annotation	UHGV-0228054_36	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_37	phrog_8714	133.8	2.6e-40	N/A	unknown function
UniRef90	UHGV-0228054_37	UniRef90_UPI0011A80F6D	113.0	9.31e-32	N/A	N/A
eggNOG-mapper	UHGV-0228054_37	1498220.A0A068A237_9CAUD	48.5	0.000001	N/A	N/A
Pfam	UHGV-0228054_37	PF06260	N/A	N/A	N/A	DUF1024
PHROG	UHGV-0228054_38	phrog_4380	93.5	1.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0228054_38	1636204.A0A0E3T9I2_9CAUD	67.4	0.000000000000512	N/A	N/A
PHROG	UHGV-0228054_39	phrog_7797	134.8	1.4e-40	N/A	unknown function
UniRef90	UHGV-0228054_39	UniRef90_A0A123BZC6	138.0	6.92003e-41	N/A	N/A
eggNOG-mapper	UHGV-0228054_39	1280.SAXN108_2216	138.0	1.15999e-41	N/A	N/A
PHROG	UHGV-0228054_41	phrog_1891	111.2	6.5e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_41	UniRef90_UPI00066B3ADB	369.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0228054_41	552396.HMPREF0863_00287	88.6	7.27e-19	HNH endonuclease	N/A
Pfam	UHGV-0228054_41	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0228054_41	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_42	phrog_2044	115.6	1.4e-34	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0228054_42	1636205.A0A0E3TAK6_9CAUD	114.0	1.97e-32	N/A	N/A
structural_annotation	UHGV-0228054_42	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_43	phrog_59	53.8	0.0000000000000022	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_43	UniRef90_A1BUA7	436.0	0	Putative HNH endonuclease	N/A
eggNOG-mapper	UHGV-0228054_43	1234593.ANBY01000020_gene1346	282.0	0	Intron encoded nuclease repeat motif	N/A
PHROG	UHGV-0228054_44	phrog_1689	169.3	0	nucleotide kinase	other
UniRef90	UHGV-0228054_44	UniRef90_UPI000C17BA6A	272.0	0	N/A	N/A
eggNOG-mapper	UHGV-0228054_44	1197952.I6SB23_9CAUD	293.0	0	N/A	N/A
Pfam	UHGV-0228054_44	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0228054_44	PF18300,MF_01549,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_45	phrog_201	71.1	6.1e-21	Panton-Valentine leukocicin	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_45	UniRef90_Q4ZB58	70.1	0.000000000000795	ORF040	N/A
eggNOG-mapper	UHGV-0228054_45	525378.HMPREF0793_1853	73.2	0.00000000000000499	PVL ORF-50-like family	N/A
Pfam	UHGV-0228054_45	PF07768	N/A	N/A	PVL ORF-50-like family	PVL_ORF50
PHROG	UHGV-0228054_46	phrog_6999	123.9	3.2e-37	N/A	unknown function
UniRef90	UHGV-0228054_46	UniRef90_A0A0M2NQN9	93.6	6.53e-24	N/A	N/A
eggNOG-mapper	UHGV-0228054_46	1194526.A284_08000	99.0	8e-27	N/A	N/A
KOfam	UHGV-0228054_47	K01160	49.6	0.0000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0228054_47	phrog_140	124.1	8.3e-37	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_47	UniRef90_I6T7K9	273.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0228054_47	1234593.ANBY01000020_gene1351	220.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0228054_47	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0228054_47	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0228054_47	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_48	phrog_433	91.0	7.6e-27	N/A	unknown function
UniRef90	UHGV-0228054_48	UniRef90_UPI00188824FE	150.0	0	N/A	N/A
eggNOG-mapper	UHGV-0228054_48	525378.HMPREF0793_1850	115.0	5.34e-33	N/A	N/A
structural_annotation	UHGV-0228054_48	PF11673	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_49	K02315	179.6	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0228054_49	phrog_50	198.9	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_49	UniRef90_C5QRY7	471.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_49	525378.HMPREF0793_1848	471.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0228054_49	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0228054_49	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0228054_49	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_50	phrog_428	191.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_50	UniRef90_A0A1W6JP67	488.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_50	1405498.SSIM_07520	377.0	0	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0228054_50	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0228054_50	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0228054_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0228054_50	PF09524,PF01638,TIGR02220,NF040642,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_51	phrog_99	53.0	1.5e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_51	UniRef90_A0A7U0J7Q5	518.0	0	Putative transcription factor	N/A
eggNOG-mapper	UHGV-0228054_51	279808.SH2380	216.0	0	N/A	N/A
Pfam	UHGV-0228054_51	PF00847	N/A	N/A	AP2 domain	AP2
structural_annotation	UHGV-0228054_51	PF00847,MF_01580	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_52	K22300	53.4	0.0000000000000056	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0228054_52	phrog_8	44.4	0.0000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0228054_52	UniRef90_A0A1W6JPC4	147.0	4.2039e-45	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0228054_52	525378.HMPREF0793_1844	60.5	0.0000000000323	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0228054_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0228054_52	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_53	phrog_398	311.6	0	N/A	unknown function
UniRef90	UHGV-0228054_53	UniRef90_UPI0002E3809F	413.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0228054_53	1034809.SLUG_08440	380.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0228054_53	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0228054_53	PF16784	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_54	K03111	110.6	2.2e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0228054_54	phrog_44	126.7	1.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_54	UniRef90_A0A7D8JHR7	276.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0228054_54	1147043.H9A0Y8_9CAUD	252.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0228054_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0228054_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0228054_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0228054_54	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_55	phrog_659	252.0	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_55	UniRef90_A0A2H4J444	415.0	0	Putative topoisomerase	N/A
eggNOG-mapper	UHGV-0228054_55	1234593.ANBY01000020_gene1360	375.0	0	N/A	N/A
Pfam	UHGV-0228054_55	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0228054_55	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_56	phrog_253	176.3	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0228054_56	UniRef90_A0A8B5S186	280.0	0	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0228054_56	1147042.H9A0R4_9CAUD	261.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0228054_56	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0228054_56	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_57	phrog_3119	123.2	5.9e-37	N/A	unknown function
PHROG	UHGV-0228054_58	phrog_3785	63.5	1.8e-18	N/A	unknown function
PHROG	UHGV-0228054_59	phrog_14955	134.3	2.4e-40	N/A	unknown function
PHROG	UHGV-0228054_60	phrog_16149	106.4	1.1e-31	N/A	unknown function
KOfam	UHGV-0228054_61	K07741	59.8	9.3e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-0228054_61	phrog_63	159.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0228054_61	UniRef90_A0A1W6JQI4	479.0	0	Antirepressor protein	N/A
eggNOG-mapper	UHGV-0228054_61	399185.A1BU88_9CAUD	434.0	0	N/A	N/A
Pfam	UHGV-0228054_61	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0228054_61	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0228054_61	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
structural_annotation	UHGV-0228054_61	PF09669,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0228054_62	UniRef90_A0A1W6JQK5	156.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0228054_62	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0228054_62	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0228054_63	K22299	64.0	3.3e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0228054_63	phrog_8	80.9	2.2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0228054_63	UniRef90_A0A318RDF6	202.0	0	Transcriptional regulator with XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0228054_63	698737.SLGD_02285	204.0	0	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0228054_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0228054_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0228054_63	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_64	phrog_87	96.6	1.7e-28	metallo-protease	other
UniRef90	UHGV-0228054_64	UniRef90_A1BU83	307.0	0	Conserved phage protein	N/A
eggNOG-mapper	UHGV-0228054_64	399185.A1BU83_9CAUD	307.0	0	Pfam:Peptidase_M78	N/A
Pfam	UHGV-0228054_64	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0228054_64	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0228054_65	phrog_5375	193.9	0	N/A	unknown function
UniRef90	UHGV-0228054_65	UniRef90_A0A380H722	70.1	0.00000000000277	N/A	N/A
eggNOG-mapper	UHGV-0228054_65	396513.SCA_0781	53.1	0.00000157	N/A	N/A
PHROG	UHGV-0228054_66	phrog_27855	332.3	0	N/A	unknown function
KOfam	UHGV-0228054_67	K06400	318.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0228054_67	phrog_95	386.8	0	integrase	integration and excision
UniRef90	UHGV-0228054_67	UniRef90_A1BU80	882.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0228054_67	398839.A1BTY3_9CAUD	885.0	0	Recombinase	N/A
Pfam	UHGV-0228054_67	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0228054_67	PF07508	N/A	N/A	Recombinase	Recombinase
structural_annotation	UHGV-0228054_67	PF07508,PF00239,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0228054	Yes	43,971	35	100	1
UHGV-1513974	No	42,954	35	100	1
UHGV-0071030	No	29,449	36	68	1
UHGV-0076605	No	26,476	36	61	1
UHGV-1482423	No	26,476	36	61	1
UHGV-1816732	No	16,827	33	39	1
UHGV-0076599	No	16,546	33	38	1
UHGV-1743822	No	10,862	35	25	1