vOTU vOTU-011837

vOTU: vOTU-011837

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-011837
Number of genomes	5
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00831 → vGENUS-11010 → vSUBGEN-15184 → vOTU-011837
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020361
Biosample ID	N/A
Genome length (bp)	55,135 bps
CheckV completeness	99.90% (High-quality)
CDS count	69
CDS density	91.78%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	307	Host agreement	98.05
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0020361_1	UniRef90_A0A7M1RTM1	97.8	1.32e-22	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0020361_1	1378168.N510_03079	60.8	0.00000000551	N/A	N/A
structural_annotation	UHGV-0020361_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_3	phrog_16490	83.6	5.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0020361_3	445972.ANACOL_01880	84.0	1.26e-16	N/A	N/A
eggNOG-mapper	UHGV-0020361_4	476272.RUMHYD_01953	49.7	0.00000062	N/A	N/A
PHROG	UHGV-0020361_5	phrog_21718	48.6	0.00000000000014	N/A	unknown function
UniRef90	UHGV-0020361_6	UniRef90_A0A316S6W0	99.8	7.21e-26	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-0020361_6	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0020361_6	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_10	phrog_32732	55.4	3.5e-16	N/A	unknown function
UniRef90	UHGV-0020361_10	UniRef90_A0A8J6M6I8	99.0	1.26e-23	N/A	N/A
eggNOG-mapper	UHGV-0020361_10	999411.HMPREF1092_00897	103.0	4.68e-26	N/A	N/A
Pfam	UHGV-0020361_10	PF14359	N/A	N/A	N/A	DUF4406
dbAPIS	UHGV-0020361_10	APIS070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020361_11	1392502.JNIO01000008_gene1280	227.0	0	N/A	N/A
structural_annotation	UHGV-0020361_11	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_14	phrog_10089	1533.5	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0020361_14	UniRef90_A0A6I2UJK2	691.0	0	Transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_14	1029823.AFIE01000007_gene1881	1307.0	0	methylase	N/A
Pfam	UHGV-0020361_14	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0020361_14	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0020361_14	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-0020361_14	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0020361_14	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
UniRef90	UHGV-0020361_16	UniRef90_A0A1G6NNF8	144.0	3.7e-37	Intein N-terminal splicing region	N/A
eggNOG-mapper	UHGV-0020361_16	1232428.CAVO010000067_gene416	161.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-0020361_17	PF00765,MF_02210,NF007644,COG2153	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020361_18	883156.HMPREF9282_00569	225.0	0	N/A	N/A
structural_annotation	UHGV-0020361_18	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_19	phrog_9467	183.5	0	N/A	unknown function
UniRef90	UHGV-0020361_19	UniRef90_UPI0018C615EF	155.0	0	Gp49 family protein	N/A
eggNOG-mapper	UHGV-0020361_19	1415774.U728_724	157.0	0	Phage protein (N4 Gp49/phage Sf6 gene 66) family	N/A
Pfam	UHGV-0020361_19	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-0020361_19	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020361_19	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_20	phrog_419	118.7	5.1e-35	N/A	unknown function
UniRef90	UHGV-0020361_20	UniRef90_A0A060QMU0	102.0	1.45e-26	N/A	N/A
eggNOG-mapper	UHGV-0020361_20	33035.JPJF01000093_gene2254	109.0	6.07e-30	N/A	N/A
structural_annotation	UHGV-0020361_20	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_21	phrog_19695	54.7	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0020361_22	1232428.CAVO010000021_gene792	137.0	2.12e-31	Putative phage tail protein	N/A
Pfam	UHGV-0020361_22	PF09458	N/A	N/A	H-type lectin domain	H_lectin
COG	UHGV-0020361_22	COG1344	N/A	N/A	Flagellin and related hook-associated protein FlgL	N/A
structural_annotation	UHGV-0020361_23	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_24	phrog_334	296.7	0	major head protein	head and packaging
UniRef90	UHGV-0020361_24	UniRef90_A0A316SB53	438.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0020361_24	401526.TcarDRAFT_1286	318.0	0	N/A	N/A
Pfam	UHGV-0020361_24	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0020361_24	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0020361_24	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_27	phrog_156	420.2	0	portal protein	head and packaging
UniRef90	UHGV-0020361_27	UniRef90_F7NK66	509.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0020361_27	401526.TcarDRAFT_1284	535.0	0	Tfp pilus assembly protein FimV	N/A
COG	UHGV-0020361_27	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0020361_27	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
Pfam	UHGV-0020361_28	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0020361_28	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
KOfam	UHGV-0020361_29	K06909	264.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020361_29	phrog_3717	234.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0020361_29	UniRef90_A0A316S7L1	759.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0020361_29	1009370.ALO_12436	574.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0020361_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0020361_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0020361_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020361_29	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0020361_30	K07474	86.5	6.7e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0020361_30	phrog_51	87.8	1.1e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0020361_30	UniRef90_A0A1I0K7H5	100.0	1.89e-24	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0020361_30	1391647.AVSV01000003_gene1801	95.5	5.19e-23	Terminase small subunit	N/A
Pfam	UHGV-0020361_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0020361_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0020361_30	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020361_31	1280689.AUJC01000003_gene960	49.7	0.00000221	N/A	N/A
UniRef90	UHGV-0020361_34	UniRef90_R6DRH1	96.3	7.68e-22	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-0020361_34	742738.HMPREF9460_00886	90.1	1.66e-20	N/A	N/A
PHROG	UHGV-0020361_35	phrog_2329	70.8	1.1e-20	N/A	unknown function
UniRef90	UHGV-0020361_35	UniRef90_UPI001AEB4F95	64.7	0.00000000000144	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_35	1120746.CCNL01000005_gene152	66.6	0.000000000000647	N/A	N/A
Pfam	UHGV-0020361_35	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
structural_annotation	UHGV-0020361_35	PF04014,NF007312,COG2336	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020361_37	401526.TcarDRAFT_1279	77.0	8.64e-16	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0020361_37	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_38	phrog_190	149.0	2.24208e-44	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020361_38	UniRef90_UPI0018C4B0C5	130.0	9.22e-37	N/A	N/A
eggNOG-mapper	UHGV-0020361_38	1347392.CCEZ01000043_gene417	121.0	3.96e-34	N/A	N/A
Pfam	UHGV-0020361_38	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0020361_38	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0020361_39	K03111	133.2	2.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0020361_39	phrog_44	142.3	2.7003e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020361_39	UniRef90_R6WK64	183.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0020361_39	626939.HMPREF9443_01150	169.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0020361_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0020361_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0020361_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0020361_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0020361_39	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_43	phrog_2776	65.8	4.9e-19	N/A	unknown function
UniRef90	UHGV-0020361_43	UniRef90_A0A2S7ZCT0	98.2	6.73e-23	DNA repair protein MmcB-related protein	N/A
Pfam	UHGV-0020361_43	PF06319	N/A	N/A	DNA repair protein MmcB-like	MmcB-like
structural_annotation	UHGV-0020361_43	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020361_45	UniRef90_A0A6N7WVF3	61.6	0.00000000208	Restriction endonuclease subunit S	N/A
PHROG	UHGV-0020361_46	phrog_3878	60.1	4.1e-17	N/A	unknown function
PHROG	UHGV-0020361_48	phrog_10714	64.7	1.2e-18	N/A	unknown function
structural_annotation	UHGV-0020361_48	PF21173	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020361_51	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_52	phrog_12728	150.2	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0020361_52	742765.HMPREF9457_02125	71.2	0.0000000000000211	N/A	N/A
UniRef90	UHGV-0020361_53	UniRef90_A0A316S7J6	99.4	9.1e-23	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_53	1280706.AUJE01000046_gene1152	69.7	0.00000000000345	N/A	N/A
structural_annotation	UHGV-0020361_53	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_54	phrog_270	99.1	5.2e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020361_54	UniRef90_UPI0011DDD220	102.0	6.94e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_54	1232453.BAIF02000016_gene3127	108.0	1.43e-24	N/A	N/A
Pfam	UHGV-0020361_54	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0020361_54	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0020361_54	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_55	phrog_72	58.0	1.4e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020361_55	1507.HMPREF0262_00432	118.0	2.83e-31	N/A	N/A
structural_annotation	UHGV-0020361_55	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_56	phrog_1366	299.7	0	N/A	unknown function
UniRef90	UHGV-0020361_56	UniRef90_UPI001EDFC883	366.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0020361_56	555779.Dthio_PD3616	267.0	0	SMART AAA ATPase	N/A
Pfam	UHGV-0020361_56	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0020361_56	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0020361_56	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0020361_59	phrog_14367	46.2	0.00000000000027	N/A	unknown function
UniRef90	UHGV-0020361_59	UniRef90_A0A4T9WJ49	56.2	0.000000029	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_59	478749.BRYFOR_06242	52.8	0.0000000762	LysM domain	N/A
Pfam	UHGV-0020361_59	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0020361_59	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0020361_59	MF_02014,NF010723	N/A	N/A	N/A	N/A
KOfam	UHGV-0020361_63	K22300	66.0	6.4e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020361_63	phrog_8	52.0	0.000000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020361_63	UniRef90_UPI000942316A	65.5	0.00000000000102	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_63	1392502.JNIO01000002_gene278	65.1	0.0000000000002	sequence-specific DNA binding	N/A
Pfam	UHGV-0020361_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020361_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0020361_64	K22300	66.5	4.8e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020361_64	phrog_8	60.6	3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020361_64	UniRef90_A0A1Q6R550	136.0	1.7e-38	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020361_64	477974.Daud_2104	68.6	0.000000000000342	sequence-specific DNA binding	N/A
Pfam	UHGV-0020361_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020361_64	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020361_64	PF01381,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020361_68	PF16747	N/A	N/A	N/A	N/A
KOfam	UHGV-0020361_69	K06400	384.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0020361_69	phrog_95	367.0	0	integrase	integration and excision
UniRef90	UHGV-0020361_69	UniRef90_E8LBZ4	419.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0020361_69	626939.HMPREF9443_00357	419.0	0	overlaps another CDS with the same product name	N/A
Pfam	UHGV-0020361_69	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0020361_69	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0020361_69	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0020361_69	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0020361_69	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020361	Yes	55,135	44	100	1
UHGV-0004317	No	50,508	44	95	1
UHGV-0030090	No	49,258	44	93	1
UHGV-0018656	No	45,844	44	86	1
UHGV-0028530	No	45,844	44	86	1