vOTU vOTU-011977

vOTU: vOTU-011977

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-011977
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → ERR7738245_bin.214
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-05372 → vGENUS-11525 → vSUBGEN-16453 → vOTU-011977
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → ERR7738245_bin.214
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0002679
Biosample ID	SAMEA4766372
Genome length (bp)	35,814 bps
CheckV completeness	99.90% (High-quality)
CDS count	47
CDS density	93.08%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → ERR7738245_bin.214	Total connections	22	Host agreement	90.91
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → ERR7738245_bin.214	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0002679_1	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0002679_3	K00986	99.3	4.5e-29	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0002679_3	phrog_1423	147.0	1.30321e-43	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002679_3	UniRef90_A0A174K662	355.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-0002679_3	478749.BRYFOR_08556	301.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0002679_3	icity0040	64.3	1.2e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0002679_3	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0002679_3	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0002679_3	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_4	phrog_17147	217.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0002679_4	478749.BRYFOR_08557	311.0	0	N/A	N/A
PHROG	UHGV-0002679_5	phrog_1129	67.9	1.1e-19	holin	lysis
UniRef90	UHGV-0002679_5	UniRef90_A0A417JD09	75.1	9.73e-16	Enolase	N/A
eggNOG-mapper	UHGV-0002679_5	411461.DORFOR_00721	72.4	0.00000000000000183	N/A	N/A
Pfam	UHGV-0002679_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-0002679_6	phrog_4105	83.4	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0002679_6	742733.HMPREF9469_05011	99.8	6.37e-26	N/A	N/A
COG	UHGV-0002679_7	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0002679_7	PF05382,NF033742,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_8	phrog_1401	48.6	0.00000000000013	N/A	unknown function
PHROG	UHGV-0002679_9	phrog_18190	93.4	1.99965e-42	N/A	unknown function
eggNOG-mapper	UHGV-0002679_9	1235790.C805_00089	103.0	2.56e-19	N/A	N/A
Pfam	UHGV-0002679_9	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0002679_9	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002679_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_11	phrog_1535	224.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0002679_11	UniRef90_W0U887	102.0	1.59e-18	Putative minor tail protein	N/A
eggNOG-mapper	UHGV-0002679_11	1504823.CCMM01000008_gene1032	125.0	1.53e-26	phage tail tape measure protein	N/A
COG	UHGV-0002679_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0002679_12	phrog_706	129.2	3.2e-38	N/A	unknown function
UniRef90	UHGV-0002679_12	UniRef90_UPI0015941ACD	170.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0002679_12	411902.CLOBOL_00127	166.0	0	N/A	N/A
Pfam	UHGV-0002679_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0002679_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_13	phrog_11299	78.9	7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0002679_13	1449050.JNLE01000003_gene3883	76.3	0.00000000000000196	N/A	N/A
structural_annotation	UHGV-0002679_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_14	phrog_3099	127.4	9.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-0002679_14	411471.SUBVAR_06936	131.0	1.16e-36	N/A	N/A
structural_annotation	UHGV-0002679_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_15	phrog_918	105.2	2.8e-31	N/A	unknown function
UniRef90	UHGV-0002679_15	UniRef90_UPI001D0B68F4	137.0	1.99e-40	N/A	N/A
eggNOG-mapper	UHGV-0002679_15	411473.RUMCAL_00361	119.0	4.71e-34	N/A	N/A
Pfam	UHGV-0002679_15	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0002679_15	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_16	phrog_3266	48.5	0.000000000000033	tail completion	connector
eggNOG-mapper	UHGV-0002679_16	411902.CLOBOL_00130	66.6	0.0000000000134	N/A	N/A
structural_annotation	UHGV-0002679_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_17	phrog_556	98.9	1.3e-29	minor head protein	head and packaging
UniRef90	UHGV-0002679_17	UniRef90_UPI000691B8FF	132.0	1.67e-36	minor capsid protein	N/A
eggNOG-mapper	UHGV-0002679_17	1449050.JNLE01000003_gene3886	132.0	2.8e-37	N/A	N/A
Pfam	UHGV-0002679_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0002679_17	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002679_18	1449050.JNLE01000003_gene3887	52.4	0.000000516	N/A	N/A
structural_annotation	UHGV-0002679_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_19	phrog_541	83.9	1.7e-24	head-tail adaptor	connector
UniRef90	UHGV-0002679_19	UniRef90_A0A371AQT0	78.2	4.76e-16	N/A	N/A
eggNOG-mapper	UHGV-0002679_19	1304866.K413DRAFT_3039	72.0	0.0000000000000222	N/A	N/A
PHROG	UHGV-0002679_21	phrog_422	208.1	0	major head protein	head and packaging
UniRef90	UHGV-0002679_21	UniRef90_W0U896	237.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0002679_21	1125725.HMPREF1325_1332	245.0	0	N/A	N/A
structural_annotation	UHGV-0002679_21	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_22	phrog_194	100.2	2.6e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0002679_22	UniRef90_UPI001B3C6D0D	132.0	1e-35	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0002679_22	742723.HMPREF9477_00907	135.0	1.05e-37	Phage minor structural protein GP20	N/A
Pfam	UHGV-0002679_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0002679_22	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_23	phrog_581	303.7	0	minor head protein	head and packaging
UniRef90	UHGV-0002679_23	UniRef90_UPI00138F9ED1	335.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002679_23	411470.RUMGNA_02213	293.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0002679_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0002679_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002679_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_24	phrog_533	292.8	0	portal protein	head and packaging
UniRef90	UHGV-0002679_24	UniRef90_A0A3P1S3R5	416.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0002679_24	742723.HMPREF9477_00910	387.0	0	N/A	N/A
structural_annotation	UHGV-0002679_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0002679_25	K06909	366.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0002679_25	phrog_3717	139.3	9.00054e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0002679_25	UniRef90_A0A3P1S603	590.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0002679_25	411461.DORFOR_01162	504.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0002679_25	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
Pfam	UHGV-0002679_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0002679_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0002679_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0002679_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0002679_25	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_26	phrog_9479	127.1	1.1e-37	N/A	unknown function
structural_annotation	UHGV-0002679_26	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_27	phrog_5057	69.4	1.6e-20	N/A	unknown function
PHROG	UHGV-0002679_29	phrog_940	357.1	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002679_29	UniRef90_UPI0009327623	455.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002679_29	1232449.BAHV02000018_gene1534	322.0	0	N/A	N/A
PADLOC	UHGV-0002679_29	MTase_II_00015	133.2	2.9e-39	Type II methyltransferase	RM
Pfam	UHGV-0002679_29	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0002679_29	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0002679_29	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0002679_29	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_31	phrog_36	47.3	0.00000000000036	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0002679_31	679192.HMPREF9013_1311	69.7	0.000000000000672	N/A	N/A
PHROG	UHGV-0002679_32	phrog_1374	40.5	0.000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0002679_32	1145276.T479_09960	46.2	0.00000997	N/A	N/A
PHROG	UHGV-0002679_33	phrog_5810	68.1	1.5e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0002679_33	411490.ANACAC_00800	134.0	3.28e-35	N/A	N/A
KOfam	UHGV-0002679_34	K03111	108.8	8.4e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0002679_34	phrog_44	138.4	3.50002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002679_34	UniRef90_UPI00164BE106	114.0	1.89e-29	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0002679_34	1158608.I583_02882	110.0	5.11e-28	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0002679_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0002679_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0002679_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0002679_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0002679_34	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0002679_35	K06167	48.3	0.00000000000012	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0002679_35	phrog_392	150.2	1.54143e-44	metal-dependent hydrolase	other
UniRef90	UHGV-0002679_35	UniRef90_A0A3D5XP59	258.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0002679_35	1401067.HMPREF0872_00405	138.0	2.9e-37	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	N/A
Pfam	UHGV-0002679_35	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0002679_35	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0002679_35	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0002679_36	phrog_2185	246.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002679_36	UniRef90_A0A6G8APQ8	248.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0002679_36	1449338.JQLU01000005_gene3745	233.0	0	N/A	N/A
structural_annotation	UHGV-0002679_36	NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0002679_37	K19171	70.0	1.5e-20	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0002679_37	phrog_77	129.2	3.1e-38	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002679_37	UniRef90_A0A6N7S5U7	384.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0002679_37	1382358.JHVN01000024_gene1691	121.0	8.15e-26	N/A	N/A
PADLOC	UHGV-0002679_37	AAA_15	51.3	0.000000000000057	N/A	N/A
COG	UHGV-0002679_37	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0002679_37	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002679_40	1123263.AUKY01000072_gene2106	56.6	0.00000000376	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0002679	Yes	35,814	39	100	1
UHGV-0003913	No	39,691	39	100	1
UHGV-0000266	No	39,442	39	100	1
UHGV-0005885	No	39,442	39	100	1
UHGV-0008046	No	35,814	39	100	1