vOTU vOTU-012164

vOTU: vOTU-012164

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012164
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01487 → vGENUS-01499 → vSUBGEN-12549 → vOTU-012164
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0076158
Biosample ID	SAMEA2580138
Genome length (bp)	39,266 bps
CheckV completeness	99.90% (High-quality)
CDS count	61
CDS density	91.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	171	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	59	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0076158_1	UniRef90_G1VXN8	291.0	0	Thioredoxin-like_fold domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_1	908340.HMPREF9406_2554	294.0	0	N/A	N/A
Pfam	UHGV-0076158_1	PF13098	N/A	N/A	Thioredoxin-like domain	Thioredoxin_2
PHROG	UHGV-0076158_3	phrog_25567	180.0	0	N/A	unknown function
PHROG	UHGV-0076158_4	phrog_374	104.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076158_4	UniRef90_N9V921	740.0	0	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_4	999413.HMPREF1094_01991	740.0	0	N/A	N/A
Pfam	UHGV-0076158_4	PF00847	N/A	N/A	AP2 domain	AP2
Pfam	UHGV-0076158_4	PF04967	N/A	N/A	HTH DNA binding domain	HTH_10
Pfam	UHGV-0076158_4	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
Pfam	UHGV-0076158_4	PF08479	N/A	N/A	POTRA domain, ShlB-type	POTRA_2
Pfam	UHGV-0076158_4	PF09339	N/A	N/A	IclR helix-turn-helix domain	HTH_IclR
Pfam	UHGV-0076158_4	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
Pfam	UHGV-0076158_4	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
Pfam	UHGV-0076158_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-0076158_5	phrog_374	73.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076158_5	UniRef90_UPI000C08D013	131.0	2.29e-34	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_5	999413.HMPREF1094_01992	457.0	0	N/A	N/A
structural_annotation	UHGV-0076158_5	PF18337,PF00847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076158_6	UniRef90_A0A318KDR1	265.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0076158_6	742740.HMPREF9474_01683	117.0	2.51e-27	Glycosyl hydrolases family 25	N/A
COG	UHGV-0076158_6	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-0076158_8	phrog_1129	79.4	2.9e-23	holin	lysis
UniRef90	UHGV-0076158_8	UniRef90_A0A099I905	173.0	0	Holin	N/A
eggNOG-mapper	UHGV-0076158_8	552396.HMPREF0863_01649	125.0	1.35e-36	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0076158_8	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0076158_8	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076158_12	UniRef90_UPI001E4F503F	83.6	0.00000000000000132	collagen-like protein	N/A
eggNOG-mapper	UHGV-0076158_12	908340.HMPREF9406_2567	416.0	0	N/A	N/A
PHROG	UHGV-0076158_13	phrog_1067	344.0	0	minor head protein	head and packaging
UniRef90	UHGV-0076158_13	UniRef90_G1VMN5	1225.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_13	908340.HMPREF9406_2568	1238.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0076158_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0076158_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0076158_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0076158_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_14	phrog_33	70.6	4e-20	distal tail protein Dit	tail
UniRef90	UHGV-0076158_14	UniRef90_A0A3E3AF06	255.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0076158_14	999413.HMPREF1094_02000	486.0	0	phage tail	N/A
NCBIFam	UHGV-0076158_14	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0076158_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0076158_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_15	K10402	43.4	0.000000000000064	KIF20; kinesin family member 20	N/A
PHROG	UHGV-0076158_15	phrog_5218	518.9	0	N/A	unknown function
UniRef90	UHGV-0076158_15	UniRef90_N9V933	1764.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_15	908340.HMPREF9406_2570	1952.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0076158_15	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0076158_15	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0076158_15	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_17	phrog_88	109.7	2.4e-32	major tail protein	tail
UniRef90	UHGV-0076158_17	UniRef90_N9WHZ7	413.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0076158_17	33035.JPJF01000039_gene278	201.0	0	N/A	N/A
NCBIFam	UHGV-0076158_17	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0076158_17	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_18	phrog_5	48.0	0.00000000000031	tail completion or Neck1 protein	connector
UniRef90	UHGV-0076158_18	UniRef90_R6UNR2	253.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0076158_18	908340.HMPREF9406_2573	253.0	0	N/A	N/A
structural_annotation	UHGV-0076158_18	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_19	phrog_78	46.3	0.00000000000087	tail terminator	connector
eggNOG-mapper	UHGV-0076158_19	999413.HMPREF1094_02005	202.0	0	N/A	N/A
structural_annotation	UHGV-0076158_19	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_20	phrog_19734	169.3	0	N/A	unknown function
UniRef90	UHGV-0076158_20	UniRef90_A0A3E5GR03	99.4	1.13e-24	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0076158_20	999413.HMPREF1094_02006	238.0	0	N/A	N/A
structural_annotation	UHGV-0076158_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_21	phrog_2550	81.3	6.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0076158_21	908340.HMPREF9406_2576	174.0	0	N/A	N/A
PHROG	UHGV-0076158_22	phrog_10	204.4	0	major head protein	head and packaging
UniRef90	UHGV-0076158_22	UniRef90_N9WI02	1026.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0076158_22	999413.HMPREF1094_02008	1026.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0076158_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0076158_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0076158_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0076158_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_23	K06904	147.1	1.59748e-43	N/A	N/A
PHROG	UHGV-0076158_23	phrog_80	180.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0076158_23	UniRef90_G1VMM5	370.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0076158_23	908340.HMPREF9406_2578	373.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0076158_23	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0076158_23	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0076158_23	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0076158_23	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_24	phrog_12	172.4	0	portal protein	head and packaging
UniRef90	UHGV-0076158_24	UniRef90_A0A099I918	792.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0076158_24	999413.HMPREF1094_02010	768.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0076158_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0076158_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0076158_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0076158_24	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_25	phrog_9	300.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0076158_25	UniRef90_G1VMM3	1123.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0076158_25	908340.HMPREF9406_2580	1139.0	0	Phage Terminase	N/A
Pfam	UHGV-0076158_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0076158_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0076158_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0076158_25	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_26	phrog_361	121.1	5.7e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0076158_26	UniRef90_A0A1Y4FAU6	144.0	4.83028e-42	Terminase	N/A
eggNOG-mapper	UHGV-0076158_26	999413.HMPREF1094_02012	253.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0076158_26	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0076158_26	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_28	phrog_119	51.9	0.000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076158_28	UniRef90_A0A414B846	166.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0076158_28	908340.HMPREF9406_2583	210.0	0	HNH nucleases	N/A
COG	UHGV-0076158_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0076158_28	TIGR02646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076158_29	UniRef90_A0A6N2XDS2	100.0	1.17e-25	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-0076158_29	1321779.HMPREF1984_01313	52.8	0.000000565	N/A	N/A
COG	UHGV-0076158_29	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0076158_35	K04763	169.6	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0076158_35	phrog_1	150.2	1.68156e-44	integrase	integration and excision
UniRef90	UHGV-0076158_35	UniRef90_A0A6N2XFP5	546.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0076158_35	908340.HMPREF9406_2589	555.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0076158_35	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0076158_35	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0076158_35	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0076158_35	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0076158_36	UniRef90_A0A412AWF1	70.1	0.000000000000021	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0076158_36	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0076158_36	PF14354,NF007260,COG4888	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0076158_37	PF04319,TIGR00686	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_41	phrog_986	136.2	1.3e-40	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076158_41	UniRef90_H1BE95	289.0	0	N/A	N/A
eggNOG-mapper	UHGV-0076158_41	908340.HMPREF9406_2594	300.0	0	N/A	N/A
Pfam	UHGV-0076158_41	PF12961	N/A	N/A	N/A	DUF3850
PHROG	UHGV-0076158_43	phrog_8470	131.7	3e-39	N/A	unknown function
UniRef90	UHGV-0076158_43	UniRef90_UPI0015F6201C	755.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_43	1232446.BAIE02000011_gene1624	201.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0076158_43	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0076158_43	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_44	phrog_7445	68.2	1.3e-19	N/A	unknown function
UniRef90	UHGV-0076158_44	UniRef90_UPI0015F68451	256.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0076158_44	484018.BACPLE_00685	71.2	0.000000000000103	PcfK-like protein	N/A
Pfam	UHGV-0076158_44	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0076158_44	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_45	phrog_3584	274.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0076158_45	UniRef90_A0A4P8IFK4	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0076158_45	908340.HMPREF9406_2599	511.0	0	N/A	N/A
structural_annotation	UHGV-0076158_45	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0076158_47	phrog_9607	73.3	3.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0076158_47	1304866.K413DRAFT_4791	58.5	0.0000000258	N/A	N/A
PHROG	UHGV-0076158_49	phrog_22529	49.0	0.000000000000082	N/A	unknown function
UniRef90	UHGV-0076158_49	UniRef90_UPI000E4AEE3B	160.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_49	411462.DORLON_01869	57.8	0.0000000108	3D domain	N/A
Pfam	UHGV-0076158_49	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0076158_49	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0076158_49	PF06725,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_53	K07741	71.8	2.3e-20	antB; anti-repressor protein	N/A
PHROG	UHGV-0076158_53	phrog_373	121.6	7.9e-36	anti-repressor	transcription regulation
UniRef90	UHGV-0076158_53	UniRef90_G1VMJ5	459.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_53	552396.HMPREF0863_00756	241.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-0076158_53	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0076158_53	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0076158_53	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_57	K18830	61.0	1.3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0076158_57	phrog_8	47.3	0.00000000000039	transcriptional regulator	transcription regulation
UniRef90	UHGV-0076158_57	UniRef90_UPI001EE0730D	224.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_57	999413.HMPREF1094_02044	159.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0076158_57	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0076158_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0076158_57	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_58	K18830	54.8	0.0000000000000023	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0076158_58	phrog_2967	46.6	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0076158_58	UniRef90_R6VV25	248.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0076158_58	908340.HMPREF9406_2608	174.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0076158_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0076158_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0076158_58	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0076158_61	K14059	195.5	0	int; integrase	N/A
PHROG	UHGV-0076158_61	phrog_1	175.7	0	integrase	integration and excision
UniRef90	UHGV-0076158_61	UniRef90_UPI001EDF2E8E	771.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0076158_61	908340.HMPREF9406_2610	910.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0076158_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0076158_61	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0076158	Yes	39,266	41	100	1
UHGV-0386238	No	38,432	41	98	1
UHGV-1992763	No	32,033	42	82	1
UHGV-0186865	No	31,870	42	82	1
UHGV-0971886	No	16,543	44	42	1
UHGV-0892137	No	11,804	44	30	1