vOTU vOTU-012354

vOTU: vOTU-012354

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012354
Number of genomes	8
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00449 → vSUBGEN-04019 → vOTU-012354
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1253365
Biosample ID	N/A
Genome length (bp)	43,112 bps
CheckV completeness	99.90% (High-quality)
CDS count	64
CDS density	92.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	199	Host agreement	88.44
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	8	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1253365_1	phrog_27197	62.1	9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1253365_1	767434.Fraau_1460	51.6	0.0000019	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1253365_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1253365_1	NF007410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_2	UniRef90_A0A8D9UH91	273.0	0	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1253365_2	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_4	phrog_253	85.9	5e-25	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1253365_4	UniRef90_A0A8D9PDS3	206.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-1253365_4	748224.HMPREF9436_03356	98.6	6.56e-24	Siphovirus Gp157	N/A
Pfam	UHGV-1253365_4	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1253365_4	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_5	phrog_155	158.3	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1253365_5	UniRef90_UPI00130EB09C	188.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1253365_5	748224.HMPREF9436_03360	174.0	0	ERF superfamily	N/A
Pfam	UHGV-1253365_5	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1253365_5	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_6	phrog_72	41.2	0.000000000012	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1253365_6	UniRef90_A0A8D9PDS2	309.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1253365_6	445972.ANACOL_01825	128.0	3.24e-35	N/A	N/A
structural_annotation	UHGV-1253365_6	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_7	phrog_7566	98.9	2.6e-29	N/A	unknown function
UniRef90	UHGV-1253365_7	UniRef90_A0A8D9UHC0	179.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1253365_7	693746.OBV_24070	119.0	1.28e-33	N/A	N/A
KOfam	UHGV-1253365_8	K03111	146.3	2.90069e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1253365_8	phrog_44	143.9	8.70206e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1253365_8	UniRef90_A0A350TKS2	201.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1253365_8	1007096.BAGW01000023_gene151	199.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1253365_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1253365_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1253365_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1253365_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1253365_8	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_11	phrog_15768	45.1	0.000000000002	N/A	unknown function
UniRef90	UHGV-1253365_11	UniRef90_UPI0019563B2C	78.2	6.88e-17	N/A	N/A
eggNOG-mapper	UHGV-1253365_11	1121344.JHZO01000003_gene982	58.2	0.00000000435	N/A	N/A
Pfam	UHGV-1253365_11	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1253365_11	PF19808	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_12	UniRef90_A0A8D9PDS1	52.0	0.00000579	Replisome organizer	N/A
structural_annotation	UHGV-1253365_12	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_14	phrog_190	108.5	5.3e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1253365_14	UniRef90_A0A8D9PDD6	259.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1253365_14	1226322.HMPREF1545_00295	117.0	1.28e-31	N/A	N/A
Pfam	UHGV-1253365_14	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1253365_14	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1253365_15	K00571	92.5	2.1e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1253365_15	phrog_67	73.0	1.3e-29	DNA methyltransferase	other
UniRef90	UHGV-1253365_15	UniRef90_A0A7X8MLD3	197.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1253365_15	1125725.HMPREF1325_1312	179.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-1253365_15	MTase_II_00172	97.5	2e-28	Type II methyltransferase	RM
Pfam	UHGV-1253365_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1253365_15	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1253365_15	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1253365_17	657322.FPR_23130	98.6	1.07e-23	N/A	N/A
KOfam	UHGV-1253365_18	K00558	42.3	9.9e-18	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1253365_18	phrog_16528	92.5	2.2e-32	DNA methyltransferase	other
UniRef90	UHGV-1253365_18	UniRef90_A0A6N9PX21	247.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1253365_18	657322.FPR_26610	199.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-1253365_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1253365_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1253365_21	PF19885	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_24	phrog_18716	179.1	0	N/A	unknown function
UniRef90	UHGV-1253365_24	UniRef90_R6RP50	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-1253365_24	665959.HMPREF1013_00856	132.0	1.19e-38	N/A	N/A
Pfam	UHGV-1253365_24	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1253365_24	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_26	phrog_25567	61.7	9.4e-18	N/A	unknown function
UniRef90	UHGV-1253365_26	UniRef90_UPI00164AED9E	132.0	5.09e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1253365_26	1235798.C817_04600	92.0	1.06e-22	N/A	N/A
Pfam	UHGV-1253365_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1253365_26	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_30	phrog_606	80.2	2.5e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1253365_30	UniRef90_UPI00195648BB	191.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1253365_30	397290.C810_05185	142.0	3.50002e-41	DNA-packaging protein gp3	N/A
Pfam	UHGV-1253365_30	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1253365_31	K06909	121.3	9.3e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1253365_31	phrog_979	197.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1253365_31	UniRef90_A0A8D9PDR5	949.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1253365_31	657322.FPR_02290	608.0	0	Terminase-like family	N/A
Pfam	UHGV-1253365_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1253365_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1253365_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_32	phrog_156	330.4	0	portal protein	head and packaging
UniRef90	UHGV-1253365_32	UniRef90_A0A8D9UH10	1130.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1253365_32	748224.HMPREF9436_01396	533.0	0	N/A	N/A
structural_annotation	UHGV-1253365_32	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_33	UniRef90_A0A8D9PDR6	172.0	0	YsxB-like protein	N/A
Pfam	UHGV-1253365_33	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-1253365_33	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_34	phrog_13908	298.9	0	N/A	unknown function
UniRef90	UHGV-1253365_34	UniRef90_A0A844DRV7	114.0	4.38e-25	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1253365_34	1410650.JHWL01000003_gene2831	117.0	5.34e-28	N/A	N/A
PHROG	UHGV-1253365_35	phrog_1357	259.7	0	major head protein	head and packaging
UniRef90	UHGV-1253365_35	UniRef90_A0A8D9UH64	701.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1253365_35	1449126.JQKL01000003_gene1695	419.0	0	N/A	N/A
Pfam	UHGV-1253365_35	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1253365_35	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1253365_35	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_36	phrog_15239	88.3	3.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1253365_36	1449126.JQKL01000003_gene1694	51.6	0.00000193	N/A	N/A
PHROG	UHGV-1253365_37	phrog_8745	40.7	0.0000000000069	tail fiber protein	tail
Pfam	UHGV-1253365_37	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1253365_37	PF10651	N/A	N/A	N/A	N/A
Pfam	UHGV-1253365_38	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1253365_38	PF04862,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_39	phrog_4105	99.6	1.7e-29	N/A	unknown function
UniRef90	UHGV-1253365_39	UniRef90_A0A8D9UHA9	144.0	9.58488e-43	Holin protein	N/A
eggNOG-mapper	UHGV-1253365_39	742733.HMPREF9469_05011	120.0	7.31e-34	N/A	N/A
PHROG	UHGV-1253365_40	phrog_1048	157.5	0	N/A	unknown function
UniRef90	UHGV-1253365_40	UniRef90_UPI0018AA3785	262.0	0	N/A	N/A
eggNOG-mapper	UHGV-1253365_40	457412.RSAG_01107	250.0	0	N/A	N/A
Pfam	UHGV-1253365_40	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1253365_40	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1253365_40	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_41	phrog_881	80.5	1.1e-23	holin	lysis
UniRef90	UHGV-1253365_41	UniRef90_A0A8D9PDR9	100.0	4.54e-26	Holin	N/A
eggNOG-mapper	UHGV-1253365_41	476272.RUMHYD_01966	76.3	2.29e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-1253365_41	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1253365_41	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-1253365_42	K01447	87.4	2.1e-25	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1253365_42	phrog_1493	161.3	0	endolysin	lysis
UniRef90	UHGV-1253365_42	UniRef90_A0A350TLR9	298.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1253365_42	1504823.CCMM01000013_gene2367	223.0	0	Ami_2	N/A
Pfam	UHGV-1253365_42	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1253365_42	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1253365_42	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1253365_42	PF01510,PF18342,MF_04111,NF008758,COG3023,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_43	phrog_12105	84.1	5.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1253365_43	1226322.HMPREF1545_03850	58.2	0.00000000326	N/A	N/A
PHROG	UHGV-1253365_44	phrog_511	228.1	0	internal virion protein	head and packaging
UniRef90	UHGV-1253365_44	UniRef90_A0A8D9UH72	790.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1253365_44	1226322.HMPREF1545_00785	304.0	0	N/A	N/A
structural_annotation	UHGV-1253365_44	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_45	UniRef90_A0A8D9UGT1	99.0	2.19e-24	Sigma C capsid protein	N/A
eggNOG-mapper	UHGV-1253365_46	1410650.JHWL01000003_gene2815	67.4	0.0000000018	N/A	N/A
PHROG	UHGV-1253365_47	phrog_22978	841.0	0	N/A	unknown function
UniRef90	UHGV-1253365_47	UniRef90_A0A1Y4WLF7	989.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1253365_47	1410650.JHWL01000003_gene2814	574.0	0	N/A	N/A
Pfam	UHGV-1253365_47	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-1253365_48	phrog_3754	90.4	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1253365_48	476272.RUMHYD_01764	160.0	0	N/A	N/A
PHROG	UHGV-1253365_49	phrog_21718	101.8	6.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-1253365_49	397290.C810_05210	75.1	0.00000000000000487	N/A	N/A
PHROG	UHGV-1253365_50	phrog_22984	82.8	3.1e-24	N/A	unknown function
PHROG	UHGV-1253365_51	phrog_16490	134.7	4.2e-40	N/A	unknown function
eggNOG-mapper	UHGV-1253365_51	1408437.JNJN01000043_gene803	140.0	2.28e-38	N/A	N/A
PHROG	UHGV-1253365_52	phrog_20016	204.8	0	N/A	unknown function
UniRef90	UHGV-1253365_52	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1253365_52	397290.C810_05214	171.0	0	N/A	N/A
structural_annotation	UHGV-1253365_52	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1253365_53	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1253365_54	K14059	153.6	1.4013e-45	int; integrase	N/A
PHROG	UHGV-1253365_54	phrog_1	168.4	0	integrase	integration and excision
UniRef90	UHGV-1253365_54	UniRef90_A0A8D9UGU2	648.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1253365_54	693746.OBV_41260	296.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1253365_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1253365_54	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1253365_54	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1253365_55	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_56	phrog_14556	42.0	0.0000000000087	N/A	unknown function
eggNOG-mapper	UHGV-1253365_56	1120998.AUFC01000015_gene1569	75.5	0.0000000000000354	competence protein COMEC	N/A
COG	UHGV-1253365_56	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
UniRef90	UHGV-1253365_58	UniRef90_A0A8D9UHB1	145.0	3.1249e-43	Repressor protein CI	N/A
eggNOG-mapper	UHGV-1253365_58	1507.HMPREF0262_00424	57.8	0.00000000271	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1253365_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1253365_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1253365_58	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_59	UniRef90_A0A8D9PDN2	130.0	2.21e-38	DNA-binding protein	N/A
structural_annotation	UHGV-1253365_59	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1253365_60	UniRef90_A0A8D9PDM8	134.0	6.54e-40	Pyocin activator protein	N/A
PHROG	UHGV-1253365_62	phrog_22529	48.0	0.00000000000016	N/A	unknown function
UniRef90	UHGV-1253365_62	UniRef90_A0A8D9UHA1	213.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-1253365_62	658088.HMPREF0987_02675	64.3	0.000000000898	peptidase	N/A
Pfam	UHGV-1253365_62	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1253365_62	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-1253365_62	COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-1253365_64	phrog_4433	165.4	0	N/A	unknown function
UniRef90	UHGV-1253365_64	UniRef90_A0A6M5C839	110.0	1.35e-27	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1253365_64	106648.BBLJ01000054_gene3814	105.0	6.85e-27	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1253365_64	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1253365	Yes	43,112	57	100	1
UHGV-1352609	No	44,086	58	100	1
UHGV-0907926	No	37,712	57	88	1
UHGV-1218302	No	25,858	57	60	1
UHGV-1058723	No	24,391	57	57	1
UHGV-0211025	No	19,569	58	46	1
UHGV-1217583	No	18,015	58	43	1
UHGV-1112561	No	14,615	58	35	1