vOTU vOTU-012450

vOTU: vOTU-012450

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012450
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00495 → vGENUS-00583 → vSUBGEN-32945 → vOTU-012450
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-1340227
Biosample ID	N/A
Genome length (bp)	38,164 bps
CheckV completeness	98.86% (High-quality)
CDS count	60
CDS density	92.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus	Total connections	127	Host agreement	84.25
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Anaerostipes → Anaerostipes hadrus	Total connections	79	Host agreement	98.73

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1340227_2	411469.EUBHAL_01069	87.0	3.08e-21	N/A	N/A
KOfam	UHGV-1340227_3	K14059	94.5	1.7e-27	int; integrase	N/A
PHROG	UHGV-1340227_3	phrog_1	129.0	4.9e-38	integrase	integration and excision
UniRef90	UHGV-1340227_3	UniRef90_A0A173S3V2	697.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-1340227_3	742740.HMPREF9474_02388	424.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1340227_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1340227_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1340227_3	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340227_5	PF00227,MF_02113_A,TIGR03634,COG0638	N/A	N/A	N/A	N/A
UniRef90	UHGV-1340227_6	UniRef90_R0C0Y5	90.9	4.03e-19	zinc_ribbon_2 domain-containing protein	N/A
COG	UHGV-1340227_6	COG4640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340227_6	NF041910	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_7	K01356	142.8	3.69943e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1340227_7	phrog_4	129.0	3.9e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-1340227_7	UniRef90_UPI00156D79C9	394.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1340227_7	411490.ANACAC_00815	338.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1340227_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-1340227_7	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1340227_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1340227_7	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_8	K22299	49.2	0.00000000000011	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1340227_8	phrog_8	46.2	0.00000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340227_8	UniRef90_UPI001570EF62	160.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1340227_8	411490.ANACAC_00814	110.0	3.29e-31	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1340227_8	retron_type_VI_hth_cluster2_1	43.0	0.000000000013	N/A	Retron
Pfam	UHGV-1340227_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1340227_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1340227_12	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_13	K22300	43.2	0.0000000000075	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1340227_13	phrog_8	49.1	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340227_13	UniRef90_A0A1Q2C3Y4	243.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1340227_13	748224.HMPREF9436_01450	98.2	1.82e-24	N/A	N/A
Pfam	UHGV-1340227_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1340227_13	PF01381,PF12728,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_16	phrog_3777	115.7	1.5e-34	N/A	unknown function
UniRef90	UHGV-1340227_16	UniRef90_UPI00142FF24A	60.8	0.00000000316	N/A	N/A
structural_annotation	UHGV-1340227_16	PF18441	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_17	phrog_434	162.0	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340227_17	UniRef90_B0P3C0	437.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1340227_17	1095750.HMPREF9970_1677	288.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1340227_17	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1340227_17	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1340227_17	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1340227_17	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_19	phrog_674	147.9	4.34403e-44	N/A	unknown function
UniRef90	UHGV-1340227_19	UniRef90_A0A415G8D2	271.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340227_19	742740.HMPREF9474_03487	193.0	0	N/A	N/A
Pfam	UHGV-1340227_19	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1340227_19	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_20	phrog_1029	266.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1340227_20	411461.DORFOR_00016	241.0	0	N/A	N/A
structural_annotation	UHGV-1340227_20	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_21	K01160	58.2	2.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1340227_21	phrog_140	129.8	1.4e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340227_21	UniRef90_D4MWK7	282.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1340227_21	857293.CAAU_0790	131.0	1.69e-37	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1340227_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1340227_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1340227_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-1340227_22	UniRef90_D4MWK8	218.0	0	HNH endonuclease	N/A
Pfam	UHGV-1340227_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1340227_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1340227_23	phrog_2562	125.6	6.7e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340227_23	UniRef90_B0P3C8	535.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340227_23	537013.CLOSTMETH_01717	189.0	0	N/A	N/A
Pfam	UHGV-1340227_23	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1340227_23	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1340227_23	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_24	K07741	201.6	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1340227_24	phrog_63	165.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1340227_24	UniRef90_UPI001D024E50	468.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1340227_24	658655.HMPREF0988_02592	337.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1340227_24	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1340227_24	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1340227_24	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1340227_24	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_26	phrog_17690	121.6	3e-36	N/A	unknown function
UniRef90	UHGV-1340227_26	UniRef90_A0A6L5XWF4	110.0	8.57e-29	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1340227_26	665950.HMPREF1025_02546	97.8	2.12e-24	N/A	N/A
PHROG	UHGV-1340227_29	phrog_31515	133.7	3.09999e-40	N/A	unknown function
Pfam	UHGV-1340227_30	PF12664	N/A	N/A	N/A	DUF3789
PHROG	UHGV-1340227_33	phrog_30258	140.6	3.20057e-42	N/A	unknown function
PHROG	UHGV-1340227_34	phrog_36	69.8	4.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340227_34	UniRef90_R6ZAS5	123.0	5.49e-33	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-1340227_34	411490.ANACAC_00789	149.0	5.04467e-44	N/A	N/A
structural_annotation	UHGV-1340227_34	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340227_36	491205.JARQ01000004_gene2524	75.1	0.0000000000000321	N/A	N/A
Pfam	UHGV-1340227_36	PF20712	N/A	N/A	Cyanobacterial TRADD-N associated 2-Transmembrane domain	CyanoTRADDas_TM
PHROG	UHGV-1340227_37	phrog_1048	163.5	0	N/A	unknown function
UniRef90	UHGV-1340227_37	UniRef90_A0A417V882	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340227_37	457412.RSAG_01107	180.0	0	N/A	N/A
Pfam	UHGV-1340227_37	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1340227_37	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1340227_37	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_38	phrog_478	127.8	3.8e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1340227_38	UniRef90_A0A285PT53	198.0	0	Prokaryotic membrane lipoprotein lipid attachment site profile	N/A
eggNOG-mapper	UHGV-1340227_38	1235792.C808_00058	185.0	0	N/A	N/A
KOfam	UHGV-1340227_39	K07474	147.1	1.79366e-43	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1340227_39	phrog_51	159.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1340227_39	UniRef90_UPI00156DD68E	318.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1340227_39	1304866.K413DRAFT_0812	215.0	0	Terminase small subunit	N/A
Pfam	UHGV-1340227_39	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1340227_39	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1340227_39	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_40	K06909	102.4	5.1e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1340227_40	phrog_2	72.7	7.2e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1340227_40	UniRef90_A0A417V8L6	919.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1340227_40	1304866.K413DRAFT_0811	743.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1340227_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1340227_40	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_41	phrog_533	280.0	0	portal protein	head and packaging
UniRef90	UHGV-1340227_41	UniRef90_A0A417V837	1053.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1340227_41	33035.JPJF01000093_gene2257	593.0	0	N/A	N/A
structural_annotation	UHGV-1340227_41	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_42	K11044	46.0	1.6e-17	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-1340227_42	phrog_581	253.7	0	minor head protein	head and packaging
UniRef90	UHGV-1340227_42	UniRef90_A0A417V7Z4	1056.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1340227_42	33035.JPJF01000093_gene2255	669.0	0	N/A	N/A
Pfam	UHGV-1340227_42	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1340227_42	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1340227_42	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1340227_42	PF06152,PF01129,NF041404	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340227_44	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_45	phrog_2303	143.7	1.19951e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1340227_45	742740.HMPREF9474_03504	180.0	0	N/A	N/A
PHROG	UHGV-1340227_46	phrog_422	272.5	0	major head protein	head and packaging
UniRef90	UHGV-1340227_46	UniRef90_A0A417V845	628.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1340227_46	663278.Ethha_1589	411.0	0	N/A	N/A
structural_annotation	UHGV-1340227_46	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_47	phrog_541	73.9	1.7e-21	head-tail adaptor	connector
eggNOG-mapper	UHGV-1340227_47	742740.HMPREF9474_03507	135.0	2.44e-39	N/A	N/A
PHROG	UHGV-1340227_48	phrog_8710	143.5	4.90454e-43	N/A	unknown function
eggNOG-mapper	UHGV-1340227_48	742740.HMPREF9474_03508	142.0	1.41952e-42	N/A	N/A
structural_annotation	UHGV-1340227_48	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_49	phrog_556	54.5	0.0000000000000018	minor head protein	head and packaging
eggNOG-mapper	UHGV-1340227_49	742740.HMPREF9474_03509	140.0	2.17005e-41	N/A	N/A
PHROG	UHGV-1340227_50	phrog_2595	105.0	4.9e-31	head-tail connector protein	connector
UniRef90	UHGV-1340227_50	UniRef90_UPI001D0627B3	203.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1340227_50	679192.HMPREF9013_1297	140.0	2.95996e-41	N/A	N/A
Pfam	UHGV-1340227_50	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1340227_50	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_51	phrog_820	125.6	2.4e-37	major tail protein	tail
eggNOG-mapper	UHGV-1340227_51	1282664.H354_06691	202.0	0	N/A	N/A
structural_annotation	UHGV-1340227_51	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_52	phrog_8300	92.0	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1340227_52	33035.JPJF01000093_gene2245	102.0	6.05e-27	N/A	N/A
structural_annotation	UHGV-1340227_52	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_53	phrog_8355	100.6	5.2e-30	N/A	unknown function
UniRef90	UHGV-1340227_53	UniRef90_UPI001D0684E3	125.0	1.09e-35	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1340227_53	33035.JPJF01000093_gene2244	94.0	2.6e-24	N/A	N/A
PHROG	UHGV-1340227_54	phrog_1535	260.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1340227_54	UniRef90_A0A1C5RRP4	461.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1340227_54	742740.HMPREF9474_03514	402.0	0	tape measure	N/A
COG	UHGV-1340227_54	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1340227_54	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_55	phrog_1194	79.4	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1340227_55	33035.JPJF01000093_gene2242	130.0	7.61e-38	N/A	N/A
structural_annotation	UHGV-1340227_55	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_56	phrog_1401	55.0	0.0000000000000013	N/A	unknown function
UniRef90	UHGV-1340227_56	UniRef90_UPI001A9A8A65	56.2	0.000000159	N/A	N/A
structural_annotation	UHGV-1340227_56	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1340227_57	phrog_16267	196.9	0	N/A	unknown function
UniRef90	UHGV-1340227_57	UniRef90_A0A417V835	1925.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1340227_57	1294142.CINTURNW_1706	218.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1340227_57	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1340227_57	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1340227_58	phrog_2566	78.2	6.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1340227_58	1232453.BAIF02000058_gene1639	63.2	0.00000000000342	N/A	N/A
PHROG	UHGV-1340227_59	phrog_199	63.2	3.3e-18	holin	lysis
UniRef90	UHGV-1340227_59	UniRef90_A0A1Q2CAY6	290.0	0	Holin	N/A
eggNOG-mapper	UHGV-1340227_59	742723.HMPREF9477_00889	227.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1340227_59	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1340227_59	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1340227_59	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1340227_59	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1340227_60	K01448	99.4	3.7e-29	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1340227_60	phrog_435	153.5	1.4013e-45	endolysin	lysis
UniRef90	UHGV-1340227_60	UniRef90_UPI000985947E	352.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1340227_60	411490.ANACAC_00597	279.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-1340227_60	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1340227_60	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1340227_60	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1340227	Yes	38,164	37	99	1
UHGV-0130351	No	40,836	37	100	1
UHGV-1407595	No	24,248	39	63	1
UHGV-1532511	No	21,939	39	57	1