vOTU vOTU-012463

vOTU: vOTU-012463

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012463
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01495 → vGENUS-02055 → vSUBGEN-14253 → vOTU-012463
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Avispirillum → Avispirillum sp900555345
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0025754
Biosample ID	N/A
Genome length (bp)	40,970 bps
CheckV completeness	99.90% (High-quality)
CDS count	63
CDS density	94.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Avispirillum → Avispirillum sp900555345	Total connections	65	Host agreement	70.77
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0025754_1	K00390	78.3	1.1e-22	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0025754_1	phrog_424	151.4	5.60519e-45	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025754_1	UniRef90_A0A3D4KZM8	382.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0025754_1	1280696.ATVY01000096_gene1971	311.0	0	N/A	N/A
Pfam	UHGV-0025754_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0025754_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0025754_1	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_2	phrog_2562	166.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025754_2	UniRef90_UPI00137AD09D	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025754_2	445971.ANASTE_00700	171.0	0	N/A	N/A
Pfam	UHGV-0025754_2	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0025754_2	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0025754_2	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_3	K03111	121.4	1.2e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0025754_3	phrog_44	116.0	3.5e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025754_3	UniRef90_A0A7C6GL00	121.0	8.89e-33	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0025754_3	1105031.HMPREF1141_2832	111.0	1.4e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0025754_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0025754_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0025754_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0025754_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0025754_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025754_5	UniRef90_A0A098GES5	105.0	1.4e-27	Putative phage associated protein	N/A
structural_annotation	UHGV-0025754_5	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_6	phrog_4973	43.4	0.0000000000054	N/A	unknown function
eggNOG-mapper	UHGV-0025754_6	935261.JAGL01000009_gene1175	46.6	0.00000658	Helix-turn-helix domain	N/A
Pfam	UHGV-0025754_6	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0025754_6	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_7	phrog_7566	75.5	5.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0025754_7	1304866.K413DRAFT_1198	52.4	0.000000125	N/A	N/A
PHROG	UHGV-0025754_8	phrog_72	52.3	0.00000000000001	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025754_8	UniRef90_A0A2Z4Q9W9	73.2	0.000000000000719	NinB	N/A
eggNOG-mapper	UHGV-0025754_8	445972.ANACOL_00148	85.9	1.78e-18	N/A	N/A
structural_annotation	UHGV-0025754_8	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_9	phrog_14970	214.5	0	N/A	unknown function
UniRef90	UHGV-0025754_9	UniRef90_UPI00164BFA28	204.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0025754_9	411470.RUMGNA_02193	168.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0025754_9	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0025754_9	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0025754_9	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_10	phrog_253	125.6	3.2e-37	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025754_10	UniRef90_UPI00189A2233	94.4	2.41e-21	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0025754_10	411470.RUMGNA_02192	73.6	0.0000000000000305	Siphovirus Gp157	N/A
Pfam	UHGV-0025754_10	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0025754_10	PF05565,NF002139	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_14	K21919	81.2	1.1e-23	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0025754_14	phrog_923	91.2	6.5e-27	N/A	unknown function
UniRef90	UHGV-0025754_14	UniRef90_UPI001A9B9B76	163.0	0	pentapeptide repeat-containing protein	N/A
Pfam	UHGV-0025754_14	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
structural_annotation	UHGV-0025754_14	PF13599,NF000421,COG1357	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_18	K22300	48.2	0.00000000000022	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0025754_18	phrog_8	60.0	5.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0025754_18	UniRef90_A0A1C5RL31	73.6	0.0000000000000129	Conjugal transfer protein TrbA	N/A
eggNOG-mapper	UHGV-0025754_18	1160721.RBI_II00559	68.9	0.00000000000111	Peptidase S24-like	N/A
Pfam	UHGV-0025754_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0025754_18	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0025754_18	PF12844,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_19	K22300	41.0	0.000000000035	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0025754_19	UniRef90_A0A3C1K3F5	55.5	0.000000158	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0025754_19	693746.OBV_19770	53.1	0.000000215	sequence-specific DNA binding	N/A
COG	UHGV-0025754_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0025754_22	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0025754_22	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0025754_22	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_23	K14059	214.2	0	int; integrase	N/A
PHROG	UHGV-0025754_23	phrog_1	201.5	0	integrase	integration and excision
UniRef90	UHGV-0025754_23	UniRef90_A0A1H8A220	245.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0025754_23	1507.HMPREF0262_00307	203.0	0	Phage integrase family	N/A
Pfam	UHGV-0025754_23	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0025754_23	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0025754_23	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025754_24	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_25	phrog_20016	160.7	0	N/A	unknown function
UniRef90	UHGV-0025754_25	UniRef90_A0A2Z4QB67	172.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0025754_25	1226322.HMPREF1545_00077	150.0	1.12104e-44	N/A	N/A
structural_annotation	UHGV-0025754_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_26	phrog_16490	178.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0025754_26	397290.C810_05212	164.0	0	N/A	N/A
PHROG	UHGV-0025754_27	phrog_22984	78.4	7.3e-23	N/A	unknown function
PHROG	UHGV-0025754_28	phrog_21718	78.7	7.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0025754_28	397290.C810_05210	69.3	0.000000000000426	N/A	N/A
PHROG	UHGV-0025754_29	phrog_3754	89.6	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0025754_29	476272.RUMHYD_01764	144.0	7.69313e-43	N/A	N/A
UniRef90	UHGV-0025754_30	UniRef90_A0A843IZ65	78.2	1.33e-17	Sigma70_r4 domain-containing protein	N/A
COG	UHGV-0025754_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0025754_30	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_32	K01447	57.0	4.3e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0025754_32	phrog_7698	152.8	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0025754_32	UniRef90_A0A353JBB4	149.0	1.28e-39	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0025754_32	938288.HG326225_gene1127	118.0	4.55e-29	Cpl-7 lysozyme C-terminal domain protein	N/A
Pfam	UHGV-0025754_32	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0025754_32	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-0025754_34	phrog_4105	74.1	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0025754_34	397288.C806_00115	88.2	3.73e-21	N/A	N/A
KOfam	UHGV-0025754_36	K07296	57.4	1.7e-16	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0025754_36	phrog_6320	57.5	1.5e-16	tail fiber protein	tail
Pfam	UHGV-0025754_36	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0025754_37	phrog_22978	495.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0025754_37	1410650.JHWL01000003_gene2814	70.9	0.00000000915	N/A	N/A
eggNOG-mapper	UHGV-0025754_38	1203606.HMPREF1526_02741	89.4	2.84e-17	N/A	N/A
PHROG	UHGV-0025754_40	phrog_511	185.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0025754_40	1410650.JHWL01000003_gene2827	233.0	0	N/A	N/A
structural_annotation	UHGV-0025754_40	PF11134,NF038015,TIGR03721,COG3823	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_41	phrog_12105	90.0	2.2e-26	N/A	unknown function
PHROG	UHGV-0025754_43	phrog_1357	221.9	0	major head protein	head and packaging
UniRef90	UHGV-0025754_43	UniRef90_A0A7G9GB60	289.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0025754_43	1410650.JHWL01000003_gene2830	276.0	0	N/A	N/A
Pfam	UHGV-0025754_43	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0025754_43	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0025754_43	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_44	phrog_13908	151.1	7.00649e-45	N/A	unknown function
eggNOG-mapper	UHGV-0025754_44	1410650.JHWL01000003_gene2831	88.6	1.79e-17	N/A	N/A
KOfam	UHGV-0025754_45	K07584	47.7	0.00000000000012	N/A	N/A
PHROG	UHGV-0025754_45	phrog_4478	54.3	3.2e-16	peptidase	other
UniRef90	UHGV-0025754_45	UniRef90_UPI000830E3BF	58.2	0.00000000357	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0025754_45	748224.HMPREF9436_01398	59.3	0.00000000406	Cysteine protease Prp	N/A
Pfam	UHGV-0025754_45	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0025754_45	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025754_45	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_46	phrog_156	316.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0025754_46	1410650.JHWL01000003_gene2833	563.0	0	N/A	N/A
structural_annotation	UHGV-0025754_46	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_47	K06909	149.5	2.8026e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0025754_47	phrog_979	147.4	7.00649e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0025754_47	UniRef90_A0A2V2GR60	625.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0025754_47	1410650.JHWL01000003_gene2834	600.0	0	N/A	N/A
Pfam	UHGV-0025754_47	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0025754_47	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0025754_47	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_50	K01160	54.2	0.0000000000000043	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0025754_50	phrog_34	55.8	0.000000000000001	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025754_50	UniRef90_A0A7G3DN11	73.9	0.0000000000000179	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0025754_50	1125712.HMPREF1316_1543	82.8	1.1e-18	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0025754_50	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0025754_50	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0025754_50	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0025754_55	K05925	98.5	8.1e-29	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0025754_55	phrog_359	257.2	0	DNA methyltransferase	other
UniRef90	UHGV-0025754_55	UniRef90_A0A845RJ44	288.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0025754_55	411468.CLOSCI_01467	274.0	0	Belongs to the MT-A70-like family	N/A
PADLOC	UHGV-0025754_55	MTase_II_00048	232.5	0	Type II methyltransferase	RM
Pfam	UHGV-0025754_55	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0025754_55	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0025754_55	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025754_57	PF09871,COG4014	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025754_58	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0025754_59	phrog_10714	47.2	0.00000000000032	N/A	unknown function
structural_annotation	UHGV-0025754_60	PF09871,COG4014	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0025754	Yes	40,970	49	100	1
UHGV-0041125	No	36,333	49	92	1