vOTU vOTU-012638

vOTU: vOTU-012638

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012638
Number of genomes	8
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00153 → vSUBFAM-01580 → vGENUS-03901 → vSUBGEN-15367 → vOTU-012638
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1922387
Biosample ID	N/A
Genome length (bp)	41,054 bps
CheckV completeness	99.90% (High-quality)
CDS count	45
CDS density	94.70%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-1922387_2	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
NCBIFam	UHGV-1922387_2	NF041793.1	N/A	N/A	ORF56 family plasmid copy control protein	N/A
structural_annotation	UHGV-1922387_2	PF19839,NF041793,COG4877	N/A	N/A	N/A	N/A
COG	UHGV-1922387_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1922387_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_6	phrog_298	110.8	1.2e-32	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_6	UniRef90_A0A6M3JN22	204.0	0	Putative PD-(D/E)XK nuclease superfamily protein	N/A
eggNOG-mapper	UHGV-1922387_6	1171373.PACID_15720	73.9	0.000000000000619	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-1922387_6	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1922387_6	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_7	phrog_155	100.6	1.7e-29	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_7	UniRef90_UPI000B80248C	162.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1922387_7	420246.GTNG_2854	145.0	1.35e-40	ERF superfamily	N/A
Pfam	UHGV-1922387_7	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1922387_7	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_8	phrog_72	64.8	1.3e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1922387_8	428127.EUBDOL_01246	84.3	5.05e-18	N/A	N/A
Pfam	UHGV-1922387_8	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1922387_8	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_9	phrog_7566	112.7	1.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-1922387_9	508419.F8J187_9CAUD	111.0	6.14e-31	N/A	N/A
KOfam	UHGV-1922387_11	K03111	146.7	2.29813e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1922387_11	phrog_44	142.8	1.99965e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_11	UniRef90_A0A2V2ET02	191.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1922387_11	1234664.AMRO01000030_gene3672	134.0	1.74e-38	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1922387_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1922387_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1922387_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1922387_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1922387_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_12	phrog_8489	241.3	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_12	UniRef90_A0A6A4UXR4	226.0	0	Phage replication initiation	N/A
eggNOG-mapper	UHGV-1922387_12	1507.HMPREF0262_00303	187.0	0	DnaD domain protein	N/A
COG	UHGV-1922387_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1922387_12	TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-1922387_13	K02315	173.5	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1922387_13	phrog_50	163.9	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_13	UniRef90_F7V9D6	137.0	2.79e-35	Putative DnaC	N/A
eggNOG-mapper	UHGV-1922387_13	1399942.U3PBJ1_9CAUD	138.0	2.32e-36	IstB-like ATP binding protein	N/A
Pfam	UHGV-1922387_13	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-1922387_13	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1922387_14	K00558	176.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1922387_14	phrog_116	205.3	0	DNA methyltransferase	other
UniRef90	UHGV-1922387_14	UniRef90_A0A316NA61	374.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1922387_14	718252.FP2_16350	349.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1922387_14	oMTase_00004	197.2	0	orphan methyltransferase	RM
Pfam	UHGV-1922387_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1922387_14	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1922387_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1922387_14	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_15	phrog_23660	66.5	4.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1922387_15	1226322.HMPREF1545_03534	72.4	0.000000000000378	N/A	N/A
PHROG	UHGV-1922387_16	phrog_5984	61.8	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1922387_16	1235835.C814_01168	103.0	4.91e-28	N/A	N/A
structural_annotation	UHGV-1922387_16	PF19561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1922387_17	UniRef90_UPI0009B2A484	56.2	0.0000000849	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1922387_17	1211817.CCAT010000003_gene253	52.4	0.00000325	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1922387_17	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-1922387_18	phrog_986	91.9	5e-27	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_18	UniRef90_A0A2N1DMT7	75.5	0.00000000000000276	RNA-binding protein	N/A
eggNOG-mapper	UHGV-1922387_18	393305.YE0860	63.2	0.000000000408	N/A	N/A
Pfam	UHGV-1922387_18	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-1922387_20	PF04545,MF_00674,NF008895,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_21	phrog_774	42.3	0.000000000016	N/A	unknown function
structural_annotation	UHGV-1922387_21	PF10458	N/A	N/A	N/A	N/A
UniRef90	UHGV-1922387_22	UniRef90_UPI000B34C540	80.5	0.00000000000000123	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-1922387_23	phrog_24361	85.5	4.9e-25	terminase	head and packaging
UniRef90	UHGV-1922387_23	UniRef90_R6ELB5	453.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1922387_23	445971.ANASTE_00711	207.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1922387_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1922387_23	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_25	phrog_156	134.7	2.6e-40	portal protein	head and packaging
UniRef90	UHGV-1922387_25	UniRef90_A0A8D9UHD1	280.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1922387_25	1121091.AUMP01000003_gene2583	249.0	0	N/A	N/A
structural_annotation	UHGV-1922387_25	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_27	phrog_267	93.4	2.5e-27	major head protein	head and packaging
UniRef90	UHGV-1922387_27	UniRef90_A0A7C6CNA9	185.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-1922387_27	665956.HMPREF1032_03906	311.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-1922387_27	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1922387_29	693746.OBV_23880	56.6	0.000000454	N/A	N/A
structural_annotation	UHGV-1922387_29	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_30	phrog_3287	89.5	1.2e-27	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1922387_30	665956.HMPREF1032_03917	154.0	1.78e-36	N/A	N/A
structural_annotation	UHGV-1922387_30	PF11134,MF_01282,TIGR03300,COG2319	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1922387_31	33035.JPJF01000033_gene2261	64.7	0.0000000254	tail collar domain protein	N/A
COG	UHGV-1922387_31	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1922387_32	phrog_5302	211.8	0	tail protein	tail
UniRef90	UHGV-1922387_32	UniRef90_UPI001951D0C2	197.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-1922387_32	445970.ALIPUT_02628	107.0	7.14e-23	N/A	N/A
structural_annotation	UHGV-1922387_32	COG1262	N/A	N/A	N/A	N/A
KOfam	UHGV-1922387_33	K00986	150.1	1.96182e-44	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1922387_33	phrog_1423	243.3	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1922387_33	UniRef90_A0A1Q6RLC1	488.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-1922387_33	755164.D6PSR5_9CAUD	273.0	0	RNA-directed DNA polymerase activity	N/A
PADLOC	UHGV-1922387_33	icity0040	102.7	6.8e-30	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1922387_33	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
structural_annotation	UHGV-1922387_33	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1922387_40	phrog_22978	109.1	4.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-1922387_40	748224.HMPREF9436_01406	83.2	0.00000000000172	N/A	N/A
KOfam	UHGV-1922387_43	K07497	67.6	2.5e-19	K07497; putative transposase	N/A
PHROG	UHGV-1922387_43	phrog_8463	112.9	2.6e-33	transposase	integration and excision
UniRef90	UHGV-1922387_43	UniRef90_A0A355V3R3	458.0	0	IS481 family transposase	N/A
eggNOG-mapper	UHGV-1922387_43	938289.CAJN020000007_gene170	235.0	0	Integrase core domain	N/A
Pfam	UHGV-1922387_43	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
Pfam	UHGV-1922387_43	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-1922387_43	PF13683	N/A	N/A	Integrase core domain	rve_3
COG	UHGV-1922387_43	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-1922387_43	PF00665,PF13518,NF033577,COG2801	N/A	N/A	N/A	N/A
KOfam	UHGV-1922387_44	K03088	53.3	0.0000000000000061	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
PHROG	UHGV-1922387_44	phrog_1740	49.4	0.000000000000053	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-1922387_44	UniRef90_A0A3D5MXE2	65.9	0.000000000358	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-1922387_44	1385510.N781_02970	62.0	0.00000000133	Sigma-70, region 4	N/A
Pfam	UHGV-1922387_44	PF07638	N/A	N/A	ECF sigma factor	Sigma70_ECF
Pfam	UHGV-1922387_44	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-1922387_44	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-1922387_44	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-1922387_44	PF08281,PF04542,MF_00961,NF009189,COG1595	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1922387	Yes	41,054	48	100	1
UHGV-1381859	No	39,571	48	97	1
UHGV-1536141	No	39,460	48	97	1
UHGV-1490419	No	36,584	49	90	1
UHGV-0206704	No	29,041	49	71	1
UHGV-1951710	No	20,671	50	51	1
UHGV-1633322	No	15,764	49	39	1
UHGV-1953896	No	11,387	46	28	1