vOTU vOTU-012653

vOTU: vOTU-012653

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-012653
Number of genomes	8
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-115 → CAG-115 sp003531585
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-01202 → vGENUS-02787 → vSUBGEN-08943 → vOTU-012653
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-115 → CAG-115 sp003531585
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0111561
Biosample ID	SAMEA3708825
Genome length (bp)	34,649 bps
CheckV completeness	93.22% (High-quality)
CDS count	48
CDS density	92.54%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-115 → CAG-115 sp003531585	Total connections	14	Host agreement	92.86
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-115 → CAG-115 sp003531585	Total connections	267	Host agreement	99.63

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0111561_1	PF08948,MF_01537,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_2	phrog_6616	65.0	1e-19	tail protein	tail
eggNOG-mapper	UHGV-0111561_2	1262449.CP6013_3213	66.2	0.0000000197	Phage minor structural protein	N/A
COG	UHGV-0111561_2	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0111561_2	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_3	phrog_1194	46.3	0.00000000000074	N/A	unknown function
structural_annotation	UHGV-0111561_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_4	phrog_1272	209.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0111561_4	UniRef90_A0A3D4L3B5	1489.0	0	PhageMin_Tail domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0111561_4	573061.Clocel_3533	243.0	0	tail tape measure protein	N/A
Pfam	UHGV-0111561_4	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0111561_4	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0111561_4	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_5	phrog_706	125.2	5.1e-37	N/A	unknown function
UniRef90	UHGV-0111561_5	UniRef90_A0A173Y9S4	130.0	5.27e-35	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0111561_5	645991.Sgly_0348	142.0	3.35e-40	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0111561_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0111561_5	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111561_6	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_8	phrog_3099	72.0	7.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0111561_8	632245.CLP_1654	80.1	0.00000000000000529	N/A	N/A
Pfam	UHGV-0111561_8	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
PHROG	UHGV-0111561_9	phrog_3266	86.7	2.3e-25	tail completion	connector
eggNOG-mapper	UHGV-0111561_9	999411.HMPREF1092_03317	66.6	0.00000000000515	N/A	N/A
structural_annotation	UHGV-0111561_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_10	phrog_556	89.3	3.1e-26	minor head protein	head and packaging
UniRef90	UHGV-0111561_10	UniRef90_D4LDZ5	93.6	4.29e-22	Minor capsid	N/A
eggNOG-mapper	UHGV-0111561_10	645991.Sgly_0344	73.6	0.00000000000000723	N/A	N/A
Pfam	UHGV-0111561_10	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0111561_10	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_11	phrog_3366	82.5	5.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0111561_11	645991.Sgly_0343	76.3	5.42e-16	N/A	N/A
Pfam	UHGV-0111561_11	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0111561_11	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_12	phrog_541	98.3	6.3e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0111561_12	411470.RUMGNA_02220	71.2	0.0000000000000277	N/A	N/A
PHROG	UHGV-0111561_13	phrog_422	321.0	0	major head protein	head and packaging
UniRef90	UHGV-0111561_13	UniRef90_R5SNJ0	341.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-0111561_13	1121335.Clst_0392	346.0	0	N/A	N/A
structural_annotation	UHGV-0111561_13	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_14	phrog_194	77.4	2.5e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0111561_14	UniRef90_UPI00117868A2	67.4	0.000000000146	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0111561_14	545697.HMPREF0216_02848	62.8	0.00000000135	Phage minor structural protein GP20	N/A
Pfam	UHGV-0111561_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0111561_14	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_17	phrog_581	293.2	0	minor head protein	head and packaging
UniRef90	UHGV-0111561_17	UniRef90_A0A1C6GGW2	305.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0111561_17	693746.OBV_18050	271.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0111561_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0111561_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111561_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_18	phrog_533	249.1	0	portal protein	head and packaging
UniRef90	UHGV-0111561_18	UniRef90_R5H044	452.0	0	Phage portal protein putative A118 family	N/A
eggNOG-mapper	UHGV-0111561_18	883114.HMPREF9709_01198	147.0	2.19e-36	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0111561_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0111561_19	K06909	125.6	5.9e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0111561_19	phrog_2	139.4	4.49999e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0111561_19	UniRef90_A0A355JEL9	405.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0111561_19	592031.GCWU000322_00074	243.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0111561_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0111561_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0111561_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0111561_19	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111561_20	1160721.RBI_II00544	57.4	0.0000000292	N/A	N/A
structural_annotation	UHGV-0111561_20	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0111561_21	K02601	54.5	0.0000000000000021	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0111561_21	phrog_6386	88.7	6.7e-26	transcription antiterminator	transcription regulation
UniRef90	UHGV-0111561_21	UniRef90_A0A174ZTH1	118.0	1.2e-30	Transcription termination factor nusG	N/A
eggNOG-mapper	UHGV-0111561_21	485916.Dtox_4226	86.3	5.73e-19	antitermination protein NusG	N/A
Pfam	UHGV-0111561_21	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0111561_21	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0111561_21	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_22	phrog_426	78.7	1.1e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0111561_22	UniRef90_R5GR06	331.0	0	PF11985 family protein	N/A
eggNOG-mapper	UHGV-0111561_22	1160721.RBI_II00546	166.0	0	N/A	N/A
Pfam	UHGV-0111561_22	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0111561_22	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_23	phrog_25462	105.3	3.6e-31	N/A	unknown function
UniRef90	UHGV-0111561_23	UniRef90_A0A349GP70	86.3	9.02e-20	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0111561_23	663278.Ethha_0086	72.4	0.00000000000000433	N/A	N/A
structural_annotation	UHGV-0111561_23	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111561_24	411473.RUMCAL_01917	72.4	0.00000000000000572	N/A	N/A
eggNOG-mapper	UHGV-0111561_25	552398.HMPREF0866_03126	49.7	0.00000151	Mor transcription activator	N/A
COG	UHGV-0111561_25	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0111561_25	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111561_26	UniRef90_UPI000F51F9E5	66.2	0.000000000122	regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0111561_26	1160721.RBI_II00550	63.2	0.000000000373	N/A	N/A
Pfam	UHGV-0111561_26	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0111561_26	PF06252	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111561_27	1160721.RBI_II00551	114.0	6.72e-29	N/A	N/A
UniRef90	UHGV-0111561_28	UniRef90_R5GQZ8	150.0	1.4013e-45	Putative SpoVT / AbrB like domain protein	N/A
eggNOG-mapper	UHGV-0111561_28	552398.HMPREF0866_03129	66.6	0.000000000000199	SpoVT / AbrB like domain	N/A
Pfam	UHGV-0111561_28	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-0111561_28	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0111561_28	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
KOfam	UHGV-0111561_29	K02315	166.4	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0111561_29	phrog_50	152.8	2.8026e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111561_29	UniRef90_R5H034	417.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0111561_29	796942.HMPREF9623_00441	201.0	0	N/A	N/A
Pfam	UHGV-0111561_29	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0111561_29	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0111561_29	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0111561_29	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_30	phrog_19658	80.0	3.5e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0111561_30	1207076.ALAT01000105_gene1930	52.0	0.00000695	Bacteriophage replication protein O	N/A
PHROG	UHGV-0111561_31	phrog_5671	99.8	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0111561_31	696281.Desru_1771	114.0	4.86e-31	N/A	N/A
KOfam	UHGV-0111561_32	K03698	51.1	0.000000000000016	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0111561_32	phrog_28876	166.4	0	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0111561_32	UniRef90_A0A3D5B685	190.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-0111561_32	718252.FP2_01870	182.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
Pfam	UHGV-0111561_32	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-0111561_32	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0111561_32	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_34	phrog_4292	69.3	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0111561_34	645991.Sgly_0752	60.1	0.0000000000106	N/A	N/A
KOfam	UHGV-0111561_35	K02450	76.8	2.8e-22	gspA; general secretion pathway protein A	N/A
PHROG	UHGV-0111561_35	phrog_296	127.3	1.7e-37	DNA transposition protein	integration and excision
UniRef90	UHGV-0111561_35	UniRef90_A0A175A3H1	316.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0111561_35	1160721.RBI_II00554	231.0	0	AAA domain	N/A
Pfam	UHGV-0111561_35	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0111561_35	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0111561_35	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0111561_36	phrog_310	342.8	0	transposase	integration and excision
UniRef90	UHGV-0111561_36	UniRef90_R5H7J6	1259.0	0	Integrase core domain protein	N/A
eggNOG-mapper	UHGV-0111561_36	1160721.RBI_II00555	622.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0111561_36	TnsB_0_V-K	73.1	1.4e-21	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0111561_36	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0111561_36	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0111561_36	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0111561_36	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0111561_41	K07729	51.4	0.000000000000024	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0111561_41	phrog_8	56.0	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0111561_41	UniRef90_UPI001A9C3CE7	59.3	0.000000000712	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0111561_41	445974.CLORAM_00010	57.8	0.00000000431	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0111561_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0111561_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0111561_41	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0111561_42	K01356	73.2	5.4e-21	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0111561_42	phrog_4	103.1	2.7e-30	transcriptional repressor	transcription regulation
UniRef90	UHGV-0111561_42	UniRef90_UPI000F54BB0A	150.0	4.52998e-41	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0111561_42	1160721.RBI_II00559	119.0	5.97e-30	Peptidase S24-like	N/A
Pfam	UHGV-0111561_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0111561_42	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0111561_42	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0111561_42	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111561_44	397291.C804_03846	78.2	0.000000000000232	N/A	N/A
PHROG	UHGV-0111561_48	phrog_125	40.4	0.000000000055	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111561_48	UniRef90_A0A1X9M8I1	79.0	9.17e-18	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0111561_48	1034347.CAHJ01000081_gene1404	83.6	5.13e-19	Resolvase, N terminal domain	N/A
COG	UHGV-0111561_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0111561	Yes	34,649	51	93	1
UHGV-1383122	No	36,141	51	95	1
UHGV-1381969	No	36,072	51	95	1
UHGV-0201293	No	29,950	51	79	1
UHGV-0124278	No	20,010	50	53	1
UHGV-1399092	No	19,198	52	52	1
UHGV-1680577	No	17,487	53	47	1
UHGV-0123420	No	11,210	52	20	1