vOTU vOTU-013018

vOTU: vOTU-013018

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-013018
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900554275
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00476 → vGENUS-10761 → vSUBGEN-14541 → vOTU-013018
Host lineage	Bacteria → Firmicutes_A
Host range breadth	Phylum
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1428564
Biosample ID	SAMN03283276
Genome length (bp)	34,108 bps
CheckV completeness	92.67% (High-quality)
CDS count	56
CDS density	93.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A	Total connections	29	Host agreement	68.97
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900554275	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 92.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1428564_1	phrog_2699	117.3	1e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1428564_1	UniRef90_A0A558ZQL9	166.0	0	Terminase large subunit (Fragment)	N/A
eggNOG-mapper	UHGV-1428564_1	755731.Clo1100_0544	212.0	0	Phage Terminase	N/A
COG	UHGV-1428564_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1428564_1	PF20441,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_2	phrog_12	145.8	2.8026e-43	portal protein	head and packaging
UniRef90	UHGV-1428564_2	UniRef90_R5ENV9	449.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1428564_2	491915.Aflv_0662	387.0	0	Phage portal protein	N/A
Pfam	UHGV-1428564_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1428564_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1428564_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1428564_2	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1428564_3	K06904	154.9	0	N/A	N/A
PHROG	UHGV-1428564_3	phrog_80	175.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1428564_3	UniRef90_A0A373ZF38	238.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1428564_3	398512.JQKC01000009_gene450	228.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1428564_3	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1428564_3	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1428564_3	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1428564_3	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_4	phrog_10	74.3	1.3e-21	major head protein	head and packaging
UniRef90	UHGV-1428564_4	UniRef90_A0A1H4BNJ7	191.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1428564_4	742740.HMPREF9474_04304	219.0	0	Phage capsid family	N/A
Pfam	UHGV-1428564_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1428564_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1428564_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428564_5	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_6	phrog_1951	83.7	1.4e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-1428564_6	1226322.HMPREF1545_00118	94.7	6.47e-24	N/A	N/A
structural_annotation	UHGV-1428564_6	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_7	phrog_5	45.4	0.000000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-1428564_7	UniRef90_A0A7C6PS93	79.7	1.84e-16	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1428564_7	1123298.KB904077_gene463	79.3	3.38e-17	N/A	N/A
Pfam	UHGV-1428564_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
eggNOG-mapper	UHGV-1428564_8	1408311.JNJM01000036_gene52	79.7	7.01e-18	N/A	N/A
structural_annotation	UHGV-1428564_8	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_9	phrog_88	147.9	5.1848e-44	major tail protein	tail
UniRef90	UHGV-1428564_9	UniRef90_D1PND6	240.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1428564_9	411471.SUBVAR_05857	240.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1428564_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1428564_9	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_10	phrog_709	84.6	9.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1428564_10	411471.SUBVAR_05858	118.0	3.92e-32	N/A	N/A
structural_annotation	UHGV-1428564_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_11	phrog_3033	59.0	6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1428564_11	1235799.C818_01010	55.5	0.00000000115	N/A	N/A
PHROG	UHGV-1428564_12	phrog_3981	333.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1428564_12	UniRef90_UPI000C7A2D83	385.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1428564_12	573061.Clocel_3967	293.0	0	tape measure	N/A
Pfam	UHGV-1428564_12	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-1428564_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1428564_12	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_13	phrog_33	80.2	4.4e-23	distal tail protein Dit	tail
UniRef90	UHGV-1428564_13	UniRef90_A0A1C6H6D2	213.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1428564_13	1444306.JFZC01000034_gene2623	129.0	4.05e-34	tail component	N/A
COG	UHGV-1428564_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1428564_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_14	phrog_1067	332.4	0	minor head protein	head and packaging
UniRef90	UHGV-1428564_14	UniRef90_A0A316NPB5	477.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1428564_14	1123263.AUKY01000068_gene489	347.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1428564_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1428564_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1428564_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1428564_14	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1428564_15	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
structural_annotation	UHGV-1428564_15	PF20377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_16	UniRef90_E0S2M2	73.6	0.000000000000816	Peptidase_C39_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1428564_16	515622.bpr_I1251	73.6	0.000000000000137	Peptidase_C39 like family	N/A
structural_annotation	UHGV-1428564_16	PF05543,NF033920	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428564_17	PF21683	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428564_18	1232428.CAVO010000002_gene2344	72.8	0.00000000000000479	N/A	N/A
structural_annotation	UHGV-1428564_18	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428564_20	665956.HMPREF1032_02937	102.0	4.74e-23	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1428564_20	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1428564_22	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_24	phrog_18593	110.4	1.5e-32	N/A	unknown function
UniRef90	UHGV-1428564_24	UniRef90_R6RWR8	152.0	4.90454e-44	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-1428564_24	411460.RUMTOR_02099	132.0	2.28e-36	N/A	N/A
Pfam	UHGV-1428564_24	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1428564_24	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_25	phrog_4105	99.5	1.9e-29	N/A	unknown function
UniRef90	UHGV-1428564_25	UniRef90_A0A8D9UHA9	157.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1428564_25	411460.RUMTOR_01326	133.0	3.42e-39	N/A	N/A
PHROG	UHGV-1428564_26	phrog_881	95.4	2.6e-28	holin	lysis
UniRef90	UHGV-1428564_26	UniRef90_A0A843HKU1	78.6	1.32e-17	Phage holin	N/A
eggNOG-mapper	UHGV-1428564_26	1321782.HMPREF1986_02282	75.9	2.04e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-1428564_26	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1428564_26	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-1428564_27	K01448	79.1	6e-23	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1428564_27	phrog_435	99.6	3.9e-29	endolysin	lysis
UniRef90	UHGV-1428564_27	UniRef90_A0A810PUG7	173.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-1428564_27	697281.Mahau_0053	143.0	1.72e-39	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1428564_27	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1428564_27	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1428564_27	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1428564_27	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428564_28	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_30	phrog_22984	55.2	0.0000000000000013	N/A	unknown function
PHROG	UHGV-1428564_31	phrog_16490	55.3	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1428564_31	476272.RUMHYD_01770	63.9	0.000000000897	N/A	N/A
structural_annotation	UHGV-1428564_32	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_33	UniRef90_A0A843GWV6	120.0	2.16e-33	Rubrerythrin domain-containing protein	N/A
KOfam	UHGV-1428564_34	K14059	221.3	0	int; integrase	N/A
PHROG	UHGV-1428564_34	phrog_1	182.5	0	integrase	integration and excision
UniRef90	UHGV-1428564_34	UniRef90_U2QJL8	446.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1428564_34	1226322.HMPREF1545_00144	446.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1428564_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1428564_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1428564_34	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_35	UniRef90_A0A8D9UHA6	120.0	3.99e-31	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-1428564_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1428564_35	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_36	phrog_17982	71.9	8.5e-21	N/A	unknown function
UniRef90	UHGV-1428564_36	UniRef90_R6T7M7	80.1	0.0000000000000819	N/A	N/A
eggNOG-mapper	UHGV-1428564_36	720554.Clocl_1541	81.6	0.00000000000000673	N/A	N/A
Pfam	UHGV-1428564_36	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1428564_36	PF14020,PF21602	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_37	UniRef90_A0A1Y3ZTC9	117.0	6.98e-32	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1428564_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1428564_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1428564_37	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_38	UniRef90_A0A1V0QCA0	83.6	1.35e-19	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1428564_38	1226322.HMPREF1545_02466	80.1	5.3e-19	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-1428564_38	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1428564_39	K22300	63.3	5.5e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1428564_39	phrog_3	47.7	0.00000000000059	transcriptional repressor	transcription regulation
UniRef90	UHGV-1428564_39	UniRef90_UPI0005E56401	53.5	0.000000188	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1428564_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1428564_39	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1428564_39	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_40	phrog_6499	119.6	1.3e-35	transcriptional regulator	transcription regulation
UniRef90	UHGV-1428564_40	UniRef90_A0A1Y3RCD0	139.0	1.7e-39	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1428564_40	742738.HMPREF9460_00847	133.0	9.07e-38	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1428564_40	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1428564_40	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1428564_40	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1428564_41	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1428564_41	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_42	phrog_19658	70.9	2.3e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428564_42	UniRef90_UPI000F7B2FCE	106.0	1.65e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1428564_42	1506583.JQJY01000003_gene3415	102.0	2.18e-25	Helix-turn-helix domain	N/A
Pfam	UHGV-1428564_42	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1428564_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1428564_44	K02314	245.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1428564_44	phrog_19	211.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428564_44	UniRef90_UPI00195856D7	363.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1428564_44	693746.OBV_27440	247.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1428564_44	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1428564_44	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1428564_44	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1428564_44	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428564_45	COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1428564_46	K03496	136.3	3e-40	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1428564_46	phrog_164	112.7	3.5e-33	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428564_46	UniRef90_UPI000318E277	215.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-1428564_46	1007096.BAGW01000033_gene1614	215.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-1428564_46	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1428564_46	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1428564_46	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428564_48	UniRef90_A0A8D9PDK2	63.2	0.0000000000644	Zinc-ribbon containing domain	N/A
KOfam	UHGV-1428564_49	K03497	79.9	4e-23	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1428564_49	phrog_27290	321.5	0	N/A	unknown function
UniRef90	UHGV-1428564_49	UniRef90_UPI001C029D7C	299.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1428564_49	742738.HMPREF9460_00856	237.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1428564_49	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1428564_49	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1428564_49	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428564_51	NF007271	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_52	phrog_924	42.6	0.00000000001	N/A	unknown function
UniRef90	UHGV-1428564_52	UniRef90_UPI001C10265C	66.6	0.00000000000992	N/A	N/A
Pfam	UHGV-1428564_52	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1428564_55	phrog_3584	76.3	4e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1428564_55	742738.HMPREF9460_04063	108.0	8.5e-26	N/A	N/A
structural_annotation	UHGV-1428564_55	PF11726	N/A	N/A	N/A	N/A
PHROG	UHGV-1428564_56	phrog_119	69.6	4.3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428564_56	UniRef90_A0A316P1K8	119.0	4.96e-33	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1428564_56	588581.Cpap_1277	122.0	3.87e-35	HNH nucleases	N/A
COG	UHGV-1428564_56	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1428564_56	TIGR02646	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1428564	Yes	34,108	62	93	1
UHGV-0132251	No	32,720	62	90	1
UHGV-1390962	No	31,505	62	87	1
UHGV-1334333	No	23,479	61	62	1