vOTU vOTU-013265

vOTU: vOTU-013265

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-013265
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00463 → vGENUS-09783 → vSUBGEN-11976 → vOTU-013265
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0064921
Biosample ID	N/A
Genome length (bp)	39,677 bps
CheckV completeness	99.90% (High-quality)
CDS count	70
CDS density	89.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77	Total connections	32	Host agreement	71.88
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-245 → CAG-245 sp000435175	Total connections	11	Host agreement	90.91

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0064921_3	K01447	87.4	2.3e-25	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0064921_3	phrog_1493	179.8	0	endolysin	lysis
UniRef90	UHGV-0064921_3	UniRef90_K1TXM5	305.0	0	N-acetylmuramoyl-L-alanine amidase (Fragment)	N/A
eggNOG-mapper	UHGV-0064921_3	1280698.AUJS01000007_gene1059	263.0	0	Ami_2	N/A
Pfam	UHGV-0064921_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0064921_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0064921_3	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0064921_3	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_4	phrog_1129	79.7	2.3e-23	holin	lysis
UniRef90	UHGV-0064921_4	UniRef90_A0A1Q6M1T2	164.0	0	Holin	N/A
eggNOG-mapper	UHGV-0064921_4	1391647.AVSV01000036_gene884	112.0	2.49e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0064921_4	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0064921_4	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_5	phrog_937	47.7	0.00000000000029	hemolysin	other
eggNOG-mapper	UHGV-0064921_5	1235793.C809_03303	61.2	0.000000000148	N/A	N/A
PHROG	UHGV-0064921_8	phrog_5717	70.2	2e-20	tail protein	tail
UniRef90	UHGV-0064921_8	UniRef90_A0A4U8Q6R4	86.7	2.78e-17	Baseplate wedge subunit and tail pin	N/A
eggNOG-mapper	UHGV-0064921_8	1235802.C823_05263	116.0	2.7e-27	N/A	N/A
COG	UHGV-0064921_8	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0064921_8	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_9	phrog_5668	44.4	5.4e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-0064921_9	658659.HMPREF0983_03295	104.0	7.16e-20	N/A	N/A
structural_annotation	UHGV-0064921_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_11	phrog_1535	100.6	2.8026e-45	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0064921_11	1391647.AVSV01000003_gene1817	126.0	2.85e-27	phage tail tape measure protein	N/A
COG	UHGV-0064921_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0064921_11	PF09486,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_12	phrog_706	110.5	1.5e-32	N/A	unknown function
UniRef90	UHGV-0064921_12	UniRef90_UPI00067E77F7	122.0	1.08e-31	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0064921_12	469596.HMPREF9488_01327	119.0	2.89e-31	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0064921_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0064921_12	PF06854	N/A	N/A	N/A	N/A
Pfam	UHGV-0064921_14	PF03703	N/A	N/A	Bacterial PH domain	bPH_2
PHROG	UHGV-0064921_15	phrog_6148	69.3	5.8e-20	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0064921_15	UniRef90_A0A415L489	101.0	9.12e-25	N/A	N/A
eggNOG-mapper	UHGV-0064921_15	1449050.JNLE01000005_gene4075	67.8	0.0000000000011	N/A	N/A
Pfam	UHGV-0064921_15	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0064921_15	PF12978	N/A	N/A	N/A	DUF3862
structural_annotation	UHGV-0064921_15	PF12978,PF10571,MF_00925,NF008423,COG2913	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_16	phrog_3099	127.6	8.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-0064921_16	645991.Sgly_0346	92.0	2.52e-21	N/A	N/A
structural_annotation	UHGV-0064921_16	PF09393,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_17	phrog_3266	109.0	3e-32	tail completion	connector
UniRef90	UHGV-0064921_17	UniRef90_A0A355D907	81.6	5.81e-17	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0064921_17	1151292.QEW_4531	97.4	6.49e-24	N/A	N/A
structural_annotation	UHGV-0064921_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_18	phrog_556	69.7	3.5e-20	minor head protein	head and packaging
UniRef90	UHGV-0064921_18	UniRef90_A0A174E6U4	97.8	2.79e-23	Minor capsid	N/A
eggNOG-mapper	UHGV-0064921_18	1304866.K413DRAFT_3041	94.7	7.1e-23	N/A	N/A
Pfam	UHGV-0064921_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0064921_18	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0064921_19	642492.Clole_0823	60.1	0.00000000202	N/A	N/A
Pfam	UHGV-0064921_19	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0064921_19	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_20	phrog_541	75.6	4.9e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0064921_20	1449050.JNLE01000003_gene3888	61.2	0.000000000298	N/A	N/A
PHROG	UHGV-0064921_21	phrog_212	238.8	0	major head protein	head and packaging
UniRef90	UHGV-0064921_21	UniRef90_A0A416DTJ6	537.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0064921_21	935836.JAEL01000021_gene1494	382.0	0	N/A	N/A
structural_annotation	UHGV-0064921_21	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_22	phrog_194	94.8	1.1e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0064921_22	UniRef90_R6XV28	267.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0064921_22	1399941.U3PIU5_9CAUD	79.3	4.29e-16	Phage minor structural protein GP20	N/A
Pfam	UHGV-0064921_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0064921_22	PF06810,MF_02110	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0064921_23	PF09871,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_25	phrog_581	206.3	0	minor head protein	head and packaging
UniRef90	UHGV-0064921_25	UniRef90_R6YG84	681.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0064921_25	33035.JPJF01000106_gene3134	105.0	8.02e-22	Phage minor capsid protein 2	N/A
Pfam	UHGV-0064921_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0064921_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0064921_25	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_26	phrog_533	361.1	0	portal protein	head and packaging
UniRef90	UHGV-0064921_26	UniRef90_R6Y8H1	832.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0064921_26	545697.HMPREF0216_02845	395.0	0	N/A	N/A
Pfam	UHGV-0064921_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0064921_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0064921_27	K06909	118.9	5.4e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0064921_27	phrog_2	138.5	7.69999e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0064921_27	UniRef90_R6DVT6	460.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0064921_27	1120998.AUFC01000030_gene2231	439.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0064921_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0064921_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0064921_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0064921_27	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0064921_28	632518.Calow_0826	87.8	1.27e-19	N/A	N/A
PHROG	UHGV-0064921_29	phrog_1233	47.8	0.00000000000026	N/A	unknown function
structural_annotation	UHGV-0064921_29	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_31	phrog_3915	65.6	4.7e-19	N/A	unknown function
PHROG	UHGV-0064921_33	phrog_9529	189.8	0	N/A	unknown function
UniRef90	UHGV-0064921_33	UniRef90_A0A7X7EKG1	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-0064921_33	1122143.AUEG01000001_gene572	174.0	0	N/A	N/A
Pfam	UHGV-0064921_33	PF04480	N/A	N/A	N/A	DUF559
COG	UHGV-0064921_33	COG2852	N/A	N/A	Very-short-patch-repair endonuclease	N/A
structural_annotation	UHGV-0064921_33	PF04480,NF007294,COG2852	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0064921_34	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_42	phrog_23490	50.5	0.000000000000019	N/A	unknown function
KOfam	UHGV-0064921_45	K01160	44.1	0.0000000000052	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0064921_45	phrog_1682	74.5	1.6e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0064921_45	UniRef90_R7FGZ0	120.0	5.51e-33	Gp63	N/A
eggNOG-mapper	UHGV-0064921_45	428125.CLOLEP_01819	94.4	3.15e-23	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
Pfam	UHGV-0064921_45	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0064921_45	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0064921_45	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0064921_46	K00571	160.8	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0064921_46	phrog_67	136.6	1.10002e-41	DNA methyltransferase	other
UniRef90	UHGV-0064921_46	UniRef90_A0A1Q6TZF2	244.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0064921_46	469596.HMPREF9488_00879	238.0	0	DNA methylase	N/A
PADLOC	UHGV-0064921_46	MTase_II_00157	153.2	1.4013e-45	Type II methyltransferase	RM
Pfam	UHGV-0064921_46	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0064921_46	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A
structural_annotation	UHGV-0064921_46	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_48	phrog_1123	54.7	0.0000000000000016	N/A	unknown function
UniRef90	UHGV-0064921_48	UniRef90_A0A7U3NJT7	67.8	0.00000000000262	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0064921_48	445972.ANACOL_03346	62.0	0.0000000000403	N/A	N/A
structural_annotation	UHGV-0064921_48	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0064921_50	UniRef90_G3MAW6	49.7	0.0000038	Gp586	N/A
PHROG	UHGV-0064921_51	phrog_13246	92.9	6.8e-28	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0064921_51	UniRef90_UPI001DCA8760	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0064921_51	720554.Clocl_0687	135.0	2.47e-35	HNH endonuclease	N/A
Pfam	UHGV-0064921_51	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0064921_51	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0064921_52	phrog_7566	60.1	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0064921_52	1507.HMPREF0262_00433	52.0	0.000000168	N/A	N/A
PHROG	UHGV-0064921_53	phrog_72	64.8	1.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0064921_53	718252.FP2_01040	63.9	0.000000000135	N/A	N/A
Pfam	UHGV-0064921_53	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0064921_53	NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0064921_54	K03111	144.7	9.5008e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0064921_54	phrog_44	146.6	1.30321e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0064921_54	UniRef90_R6YHT0	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0064921_54	203119.Cthe_2186	159.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0064921_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0064921_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0064921_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0064921_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0064921_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_55	phrog_155	133.0	2.2e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0064921_55	UniRef90_A0A3D1PJF8	284.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0064921_55	1304866.K413DRAFT_1196	223.0	0	ERF superfamily	N/A
Pfam	UHGV-0064921_55	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0064921_55	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0064921_55	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0064921_56	phrog_253	105.1	7e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0064921_56	UniRef90_UPI000368F966	84.3	1.65e-17	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0064921_56	1296659.S5M9S4_9CAUD	72.8	0.0000000000000664	Siphovirus Gp157	N/A
Pfam	UHGV-0064921_56	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0064921_56	PF05565,NF002139	N/A	N/A	N/A	N/A
UniRef90	UHGV-0064921_63	UniRef90_UPI0012B5CFF9	72.0	0.00000000000000588	N/A	N/A
eggNOG-mapper	UHGV-0064921_63	646413.C5IUM3_9CAUD	64.3	0.000000000000909	N/A	N/A
Pfam	UHGV-0064921_63	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0064921_63	PF05339,MF_00535,NF002773,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0064921_64	K01356	127.9	1.3e-37	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0064921_64	phrog_4	123.5	2.1e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-0064921_64	UniRef90_R7F6V6	263.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-0064921_64	1203606.HMPREF1526_00998	136.0	1.79e-37	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0064921_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0064921_64	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0064921_64	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0064921_64	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0064921_66	K06400	314.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0064921_66	phrog_95	344.5	0	integrase	integration and excision
UniRef90	UHGV-0064921_66	UniRef90_UPI00038C706F	368.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0064921_66	1151292.QEW_0309	362.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0064921_66	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0064921_66	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0064921_66	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0064921_66	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0064921_66	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0064921_67	545697.HMPREF0216_02902	78.6	6.34e-17	N/A	N/A
UniRef90	UHGV-0064921_68	UniRef90_R6BFU4	196.0	0	Plasmid stabilization system family protein	N/A
eggNOG-mapper	UHGV-0064921_68	913865.DOT_2772	55.5	0.0000000128	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-0064921_68	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-0064921_68	COG3668	N/A	N/A	Plasmid stabilization system protein ParE	N/A
eggNOG-mapper	UHGV-0064921_69	439235.Dalk_0512	45.8	0.00000667	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0064921	Yes	39,677	30	100	1
UHGV-1453033	No	34,469	30	91	1
UHGV-1453836	No	34,490	30	91	1
UHGV-1638940	No	16,188	31	42	1
UHGV-1640544	No	16,188	31	42	1
UHGV-1580717	No	11,960	31	31	1