vOTU vOTU-013701

vOTU: vOTU-013701

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-013701
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → NSJ-51 → NSJ-51 sp900549795
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-03646 → vGENUS-18873 → vSUBGEN-36144 → vOTU-013701
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1930550
Biosample ID	N/A
Genome length (bp)	39,157 bps
CheckV completeness	95.59% (High-quality)
CDS count	59
CDS density	92.18%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	12	Host agreement	91.67
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → NSJ-51 → NSJ-51 sp900549795	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1930550_1	742738.HMPREF9460_03967	57.0	0.00000000433	N/A	N/A
PHROG	UHGV-1930550_2	phrog_134	40.6	0.000000000037	N/A	unknown function
UniRef90	UHGV-1930550_2	UniRef90_A0A8J6J965	93.2	3.19e-24	XkdX family protein	N/A
Pfam	UHGV-1930550_2	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1930550_2	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1930550_3	1519439.JPJG01000060_gene1895	75.1	0.0000000000000183	N/A	N/A
structural_annotation	UHGV-1930550_3	PF10618	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1930550_4	PF13859,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_6	phrog_13589	64.4	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1930550_6	411471.SUBVAR_06929	150.0	7.29936e-42	ATPase involved in DNA repair	N/A
COG	UHGV-1930550_6	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1930550_8	phrog_1084	44.7	0.0000000000021	N/A	unknown function
structural_annotation	UHGV-1930550_8	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_10	phrog_32744	517.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1930550_10	1120998.AUFC01000030_gene2247	206.0	0	N/A	N/A
structural_annotation	UHGV-1930550_10	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_11	phrog_1194	71.9	8.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1930550_11	1120998.AUFC01000030_gene2246	134.0	2.05e-37	N/A	N/A
structural_annotation	UHGV-1930550_11	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_12	phrog_1535	98.4	6.6e-29	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1930550_12	693746.OBV_18190	374.0	0	domain protein	N/A
COG	UHGV-1930550_12	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1930550_12	PF05546,TIGR02559	N/A	N/A	N/A	N/A
Pfam	UHGV-1930550_13	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-1930550_14	phrog_706	90.8	1.6e-26	N/A	unknown function
UniRef90	UHGV-1930550_14	UniRef90_UPI000682A80B	231.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1930550_14	693746.OBV_18170	207.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1930550_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1930550_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_15	phrog_11299	90.3	2.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1930550_15	693746.OBV_18160	192.0	0	N/A	N/A
structural_annotation	UHGV-1930550_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_16	phrog_3099	92.9	3.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-1930550_16	1232443.BAIA02000078_gene23	273.0	0	N/A	N/A
structural_annotation	UHGV-1930550_16	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_17	phrog_3266	63.6	2.8e-18	tail completion	connector
eggNOG-mapper	UHGV-1930550_17	693746.OBV_18140	221.0	0	N/A	N/A
structural_annotation	UHGV-1930550_17	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_18	phrog_556	65.8	5.9e-19	minor head protein	head and packaging
UniRef90	UHGV-1930550_18	UniRef90_UPI00164EC49A	138.0	4.88e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-1930550_18	33035.JPJF01000106_gene3128	70.5	0.00000000000034	N/A	N/A
Pfam	UHGV-1930550_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1930550_18	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1930550_19	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_20	phrog_541	58.3	1.4e-16	head-tail adaptor	connector
eggNOG-mapper	UHGV-1930550_20	693746.OBV_18110	111.0	3.46e-30	N/A	N/A
PHROG	UHGV-1930550_21	phrog_212	272.6	0	major head protein	head and packaging
UniRef90	UHGV-1930550_21	UniRef90_A0A8J6JGV9	620.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1930550_21	935836.JAEL01000021_gene1494	351.0	0	N/A	N/A
structural_annotation	UHGV-1930550_21	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_22	phrog_194	86.3	4.7e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-1930550_22	UniRef90_UPI00164D9F94	223.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1930550_22	693746.OBV_18080	167.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1930550_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1930550_22	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_23	phrog_3675	93.6	1.1e-27	N/A	unknown function
UniRef90	UHGV-1930550_23	UniRef90_J5UL11	128.0	1.56e-36	YjcQ protein	N/A
eggNOG-mapper	UHGV-1930550_23	936375.HMPREF1152_1073	128.0	2.62e-37	YjcQ protein	N/A
Pfam	UHGV-1930550_23	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1930550_23	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1930550_24	663278.Ethha_0498	81.3	1.44e-19	N/A	N/A
PHROG	UHGV-1930550_25	phrog_581	248.2	0	minor head protein	head and packaging
UniRef90	UHGV-1930550_25	UniRef90_UPI0006814CA4	592.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1930550_25	693746.OBV_18050	593.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1930550_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1930550_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1930550_25	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_26	phrog_533	190.1	0	portal protein	head and packaging
UniRef90	UHGV-1930550_26	UniRef90_UPI000680A1DB	538.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1930550_26	693746.OBV_18040	426.0	0	N/A	N/A
structural_annotation	UHGV-1930550_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_28	K06909	399.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1930550_28	phrog_3717	135.3	3.7e-40	terminase large subunit	head and packaging
UniRef90	UHGV-1930550_28	UniRef90_A0A8J6J2G9	853.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1930550_28	665956.HMPREF1032_02957	498.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1930550_28	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1930550_28	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1930550_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1930550_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1930550_28	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_29	phrog_2412	90.4	1.9e-26	N/A	unknown function
UniRef90	UHGV-1930550_29	UniRef90_UPI000CF51FBE	67.4	0.00000000000851	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1930550_29	1232449.BAHV02000018_gene1532	74.3	0.00000000000000345	N/A	N/A
PHROG	UHGV-1930550_30	phrog_36	86.1	4.5e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1930550_30	UniRef90_A0A8J6J9G8	270.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1930550_30	439292.Bsel_0778	58.9	0.0000000049	N/A	N/A
Pfam	UHGV-1930550_30	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1930550_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1930550_30	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1930550_31	PF19070	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_34	phrog_21034	57.3	2.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1930550_34	379066.GAU_1809	64.7	0.000000000000969	N/A	N/A
PHROG	UHGV-1930550_35	phrog_874	186.1	0	N/A	unknown function
UniRef90	UHGV-1930550_35	UniRef90_A0A4P6LRJ9	196.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1930550_35	1232449.BAHV02000016_gene1832	170.0	0	N/A	N/A
structural_annotation	UHGV-1930550_35	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_38	phrog_7839	85.4	6.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1930550_38	665956.HMPREF1032_03091	147.0	2.52234e-44	N/A	N/A
structural_annotation	UHGV-1930550_38	PF08860	N/A	N/A	N/A	N/A
Pfam	UHGV-1930550_39	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1930550_39	PF04936,NF033558	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_40	K01160	61.6	2.3e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1930550_40	phrog_140	101.4	9.1e-30	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1930550_40	UniRef90_UPI0018A058D6	206.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1930550_40	742738.HMPREF9460_01358	206.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1930550_40	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1930550_40	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1930550_40	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_41	K07505	412.9	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1930550_41	phrog_2597	1161.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1930550_41	UniRef90_UPI0018A0FC0D	1353.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1930550_41	411462.DORLON_00808	1038.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1930550_41	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1930550_41	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1930550_41	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1930550_41	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_42	K17677	341.7	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1930550_42	phrog_16	268.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1930550_42	UniRef90_UPI00189FE75B	986.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1930550_42	1235792.C808_05388	846.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-1930550_42	mREase_IV_00005	144.9	6.50202e-43	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1930550_42	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1930550_42	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1930550_42	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1930550_42	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_43	phrog_2698	192.3	0	N/A	unknown function
UniRef90	UHGV-1930550_43	UniRef90_UPI0018A0CF19	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-1930550_43	394503.Ccel_3308	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1930550_43	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_44	phrog_124	242.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1930550_44	UniRef90_UPI0018A1021B	514.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1930550_44	645991.Sgly_0321	411.0	0	AAA domain	N/A
Pfam	UHGV-1930550_44	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1930550_44	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_45	K03546	59.1	5.6e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1930550_45	phrog_1499	473.3	0	N/A	unknown function
UniRef90	UHGV-1930550_45	UniRef90_UPI00189C91C8	639.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1930550_45	645991.Sgly_0320	543.0	0	domain protein	N/A
Pfam	UHGV-1930550_45	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1930550_45	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1930550_45	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_46	phrog_1029	156.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1930550_46	1203606.HMPREF1526_01890	141.0	1.14e-38	N/A	N/A
structural_annotation	UHGV-1930550_46	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_47	phrog_997	114.2	8e-34	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1930550_47	UniRef90_R6MCS9	103.0	2.34e-26	N/A	N/A
eggNOG-mapper	UHGV-1930550_47	552398.HMPREF0866_01626	145.0	2.53635e-43	N/A	N/A
PHROG	UHGV-1930550_48	phrog_19349	50.6	0.000000000000024	N/A	unknown function
UniRef90	UHGV-1930550_48	UniRef90_A0A8J6J9H8	192.0	0	Lytic transglycosylase domain-containing protein	N/A
eggNOG-mapper	UHGV-1930550_48	246194.CHY_0404	54.7	0.00000103	PFAM Lytic transglycosylase catalytic	N/A
Pfam	UHGV-1930550_48	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1930550_48	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1930550_48	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1930550_50	phrog_424	78.2	9.7e-23	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1930550_50	693746.OBV_43240	494.0	0	N/A	N/A
COG	UHGV-1930550_50	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1930550_50	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_55	K07729	53.0	0.0000000000000077	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1930550_55	phrog_3	51.3	0.000000000000052	transcriptional repressor	transcription regulation
UniRef90	UHGV-1930550_55	UniRef90_A0A3E2U242	77.4	1.67e-17	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1930550_55	1120978.KB894087_gene408	58.9	0.0000000000579	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1930550_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1930550_55	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1930550_56	K22299	50.3	0.000000000000055	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1930550_56	UniRef90_A0A498D1Q4	99.8	1.95e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1930550_56	35344.A0A097PBE5_BPT12	79.3	6.21e-16	Peptidase S24-like	N/A
Pfam	UHGV-1930550_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1930550_56	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1930550_58	UniRef90_UPI001956EF77	196.0	0	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-1930550_58	1297617.JPJD01000001_gene2682	114.0	2.33e-29	Peptidase propeptide and YPEB domain protein	N/A
Pfam	UHGV-1930550_58	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-1930550_58	COG3212	N/A	N/A	PepSY domain containing protein, regulator of zincin peptidase activity	N/A
KOfam	UHGV-1930550_59	K14059	185.6	0	int; integrase	N/A
PHROG	UHGV-1930550_59	phrog_1	156.8	0	integrase	integration and excision
UniRef90	UHGV-1930550_59	UniRef90_A0A8J6JEJ8	712.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1930550_59	742738.HMPREF9460_01344	226.0	0	Phage integrase family	N/A
Pfam	UHGV-1930550_59	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1930550_59	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1930550_59	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1930550	Yes	39,157	54	96	1
UHGV-1504713	No	37,476	54	91	1
UHGV-1923215	No	24,149	53	58	1
UHGV-1726133	No	15,229	55	37	1
UHGV-1800169	No	12,872	55	32	1
UHGV-1626837	No	11,332	55	28	1
UHGV-2192255	No	10,124	56	25	1