vOTU vOTU-013813

vOTU: vOTU-013813

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-013813
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01175 → vGENUS-01134 → vSUBGEN-11119 → vOTU-013813
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1514653
Biosample ID	SAMEA3136721
Genome length (bp)	43,075 bps
CheckV completeness	99.29% (High-quality)
CDS count	69
CDS density	90.37%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02	Total connections	32	Host agreement	78.13
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715	Total connections	13	Host agreement	84.62

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1514653_2	UniRef90_A0A7M1RTM1	72.0	0.00000000000144	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1514653_2	1378168.N510_03079	74.7	0.0000000000000629	N/A	N/A
structural_annotation	UHGV-1514653_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_4	phrog_16490	65.5	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1514653_4	476272.RUMHYD_01770	84.3	2.15e-17	N/A	N/A
PHROG	UHGV-1514653_5	phrog_22984	46.4	0.00000000000076	N/A	unknown function
PHROG	UHGV-1514653_8	phrog_10091	109.5	2.2e-32	holin	lysis
UniRef90	UHGV-1514653_8	UniRef90_A0A1Y4RHF4	129.0	2.16e-37	Phage holin	N/A
eggNOG-mapper	UHGV-1514653_8	445975.COLSTE_02144	115.0	7.85e-33	Bacteriophage holin	N/A
Pfam	UHGV-1514653_8	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1514653_8	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1514653_8	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514653_8	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_9	phrog_1863	64.5	1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1514653_9	748224.HMPREF9436_01412	93.6	3.06e-24	N/A	N/A
PHROG	UHGV-1514653_10	phrog_9589	50.7	0.00000000000002	endolysin	lysis
UniRef90	UHGV-1514653_10	UniRef90_UPI001BB47323	98.6	1.93e-21	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1514653_10	742740.HMPREF9474_04289	73.9	0.00000000000107	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-1514653_10	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1514653_10	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1514653_10	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514653_11	UniRef90_R6I1X1	172.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1514653_11	1203606.HMPREF1526_01926	80.9	1.67e-16	N/A	N/A
PHROG	UHGV-1514653_13	phrog_5302	125.1	3.3e-37	tail protein	tail
UniRef90	UHGV-1514653_13	UniRef90_L0KWD4	97.8	2.11e-18	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1514653_13	742740.HMPREF9474_02337	70.9	0.000000000331	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1514653_13	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1514653_13	PF14686,TIGR03000,COG1262	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_15	phrog_18725	52.4	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1514653_15	1226322.HMPREF1545_00062	106.0	2.23e-26	N/A	N/A
PHROG	UHGV-1514653_16	phrog_13879	270.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1514653_16	665956.HMPREF1032_03630	212.0	0	N/A	N/A
structural_annotation	UHGV-1514653_16	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_17	phrog_1194	94.9	6.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1514653_17	742740.HMPREF9474_03515	137.0	3.59e-40	N/A	N/A
structural_annotation	UHGV-1514653_17	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_18	phrog_1535	158.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1514653_18	UniRef90_A0A1C6L0H4	411.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1514653_18	1121866.AUGK01000003_gene1437	343.0	0	phage tail tape measure protein	N/A
COG	UHGV-1514653_18	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1514653_18	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1514653_19	1121333.JMLH01000047_gene1011	75.9	0.00000000000000128	N/A	N/A
UniRef90	UHGV-1514653_20	UniRef90_UPI00164D364F	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1514653_20	469596.HMPREF9488_01311	92.0	1.07e-22	N/A	N/A
Pfam	UHGV-1514653_20	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1514653_20	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_21	phrog_158	58.4	1.5e-16	major tail protein	tail
UniRef90	UHGV-1514653_21	UniRef90_UPI00164D954A	254.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1514653_21	1232453.BAIF02000058_gene1634	102.0	7.82e-26	N/A	N/A
Pfam	UHGV-1514653_21	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1514653_21	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514653_22	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1514653_24	1121866.AUGK01000003_gene1432	77.8	1.24e-16	N/A	N/A
PHROG	UHGV-1514653_25	phrog_132	43.8	0.0000000000038	head-tail adaptor	connector
UniRef90	UHGV-1514653_25	UniRef90_UPI00164E20D5	155.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1514653_25	1298920.KI911353_gene2658	66.6	0.000000000000777	N/A	N/A
Pfam	UHGV-1514653_25	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1514653_25	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_26	phrog_1328	127.8	6.6e-38	major head protein	head and packaging
UniRef90	UHGV-1514653_26	UniRef90_UPI00164DD2D5	596.0	0	N/A	N/A
eggNOG-mapper	UHGV-1514653_26	665956.HMPREF1032_03619	238.0	0	N/A	N/A
Pfam	UHGV-1514653_26	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1514653_26	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_28	phrog_64	209.6	0	portal protein	head and packaging
UniRef90	UHGV-1514653_28	UniRef90_UPI001C02F349	762.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1514653_28	1123263.AUKY01000015_gene1609	423.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1514653_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1514653_28	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_29	phrog_38	186.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1514653_29	UniRef90_A0A810QA10	660.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1514653_29	1298920.KI911353_gene2682	472.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1514653_29	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1514653_29	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514653_29	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_30	phrog_1233	76.6	3.9e-22	N/A	unknown function
UniRef90	UHGV-1514653_30	UniRef90_UPI001C39EFB9	116.0	3.39e-31	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1514653_30	1232453.BAIF02000011_gene3355	103.0	8.42e-27	N/A	N/A
KOfam	UHGV-1514653_31	K06400	207.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1514653_31	phrog_95	205.8	0	integrase	integration and excision
UniRef90	UHGV-1514653_31	UniRef90_A0A3D4G6V8	272.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1514653_31	697329.Rumal_3466	235.0	0	resolvase	N/A
Pfam	UHGV-1514653_31	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1514653_31	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1514653_31	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1514653_31	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514653_32	PF14201	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_33	phrog_606	41.8	0.0000000000077	terminase small subunit	head and packaging
UniRef90	UHGV-1514653_33	UniRef90_UPI001D08D6B6	262.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1514653_33	1235802.C823_05975	67.8	0.00000000002	N/A	N/A
Pfam	UHGV-1514653_33	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1514653_33	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_35	phrog_256	324.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514653_35	UniRef90_A0A1V5XFC1	566.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1514653_35	1235793.C809_02292	241.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1514653_35	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1514653_35	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1514653_35	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
KOfam	UHGV-1514653_36	K02316	68.2	1.3e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1514653_36	phrog_11992	109.4	4.1e-32	N/A	unknown function
UniRef90	UHGV-1514653_36	UniRef90_A0A1K1PGY2	104.0	1.07e-24	CHC2 zinc finger	N/A
eggNOG-mapper	UHGV-1514653_36	697329.Rumal_0697	102.0	1.21e-24	CHC2 zinc finger domain protein	N/A
PADLOC	UHGV-1514653_36	drt-cluster192	51.8	0.000000000000019	DRT	DRT
Pfam	UHGV-1514653_36	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1514653_36	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1514653_36	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_37	phrog_3490	113.1	2.3e-33	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514653_37	UniRef90_R6N0P8	214.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1514653_37	1304866.K413DRAFT_0825	164.0	0	resolution of meiotic recombination intermediates	N/A
Pfam	UHGV-1514653_37	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1514653_37	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1514653_37	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_38	phrog_18107	70.1	4.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1514653_38	476272.RUMHYD_02831	169.0	0	N/A	N/A
structural_annotation	UHGV-1514653_38	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_40	phrog_2872	218.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514653_40	UniRef90_A0A8J6P193	270.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1514653_40	1449050.JNLE01000005_gene3946	221.0	0	AAA domain	N/A
Pfam	UHGV-1514653_40	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1514653_40	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_43	phrog_18716	140.7	3.69943e-42	N/A	unknown function
UniRef90	UHGV-1514653_43	UniRef90_A0A1J0GJP7	142.0	1.24001e-41	N/A	N/A
eggNOG-mapper	UHGV-1514653_43	665959.HMPREF1013_00856	113.0	7.24e-31	N/A	N/A
Pfam	UHGV-1514653_43	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1514653_43	PF18909	N/A	N/A	N/A	N/A
Pfam	UHGV-1514653_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1514653_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1514653_46	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514653_47	PF15188	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514653_52	UniRef90_A0A1C5RYU8	107.0	2.83e-29	Restriction alleviation protein, Lar family	N/A
structural_annotation	UHGV-1514653_52	PF14354	N/A	N/A	N/A	N/A
KOfam	UHGV-1514653_54	K00558	157.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1514653_54	phrog_116	195.3	0	DNA methyltransferase	other
UniRef90	UHGV-1514653_54	UniRef90_R6C729	506.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1514653_54	1499680.CCFE01000031_gene3768	395.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1514653_54	oMTase_00004	210.6	0	orphan methyltransferase	RM
Pfam	UHGV-1514653_54	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1514653_54	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1514653_54	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1514653_55	K01449	49.5	0.000000000000074	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1514653_55	phrog_30550	136.8	8.00001e-41	N/A	unknown function
UniRef90	UHGV-1514653_55	UniRef90_R6CIF0	120.0	8.9e-32	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1514653_55	1519439.JPJG01000077_gene920	102.0	6.32e-26	Cell Wall Hydrolase	N/A
Pfam	UHGV-1514653_55	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1514653_55	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_56	phrog_14105	48.3	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1514653_56	526218.Sterm_0811	65.1	0.00000000406	dextransucrase activity	N/A
COG	UHGV-1514653_56	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
Pfam	UHGV-1514653_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1514653_57	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514653_61	UniRef90_UPI000F0633F9	77.4	2.95e-17	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1514653_61	693746.OBV_43260	79.3	8.78e-19	N/A	N/A
structural_annotation	UHGV-1514653_61	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1514653_65	K22300	62.7	8.6e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1514653_65	phrog_8	55.8	5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1514653_65	UniRef90_A0A3A9I218	134.0	3.8e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1514653_65	748224.HMPREF9436_01444	118.0	2.04e-32	N/A	N/A
PADLOC	UHGV-1514653_65	retron_type_VI_hth_cluster2_1	45.0	0.0000000000025	N/A	Retron
Pfam	UHGV-1514653_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1514653_65	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1514653_65	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1514653_67	phrog_6148	66.8	2.2e-19	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1514653_67	1449050.JNLE01000005_gene4075	85.9	2.05e-18	N/A	N/A
Pfam	UHGV-1514653_67	PF07467	N/A	N/A	Beta-lactamase inhibitor (BLIP)	BLIP
UniRef90	UHGV-1514653_68	UniRef90_A0A8D9UHA6	71.2	0.00000000000578	Helix-turn-helix XRE-family like protein	N/A
eggNOG-mapper	UHGV-1514653_68	1382304.JNIL01000001_gene3508	50.1	0.00000758	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1514653_68	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1514653_68	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1514653_69	K14059	100.2	3.4e-29	int; integrase	N/A
PHROG	UHGV-1514653_69	phrog_1	110.4	2.2e-32	integrase	integration and excision
UniRef90	UHGV-1514653_69	UniRef90_R6I1Y0	454.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1514653_69	246199.CUS_5913	107.0	2.63e-23	Phage integrase family	N/A
Pfam	UHGV-1514653_69	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1514653_69	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1514653_69	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1514653	Yes	43,075	48	99	1
UHGV-0083589	No	42,749	48	99	1
UHGV-1536678	No	38,185	49	88	1
UHGV-1499012	No	33,267	48	77	1
UHGV-1477948	No	29,655	48	68	1
UHGV-1377138	No	23,637	48	55	1
UHGV-1735155	No	14,917	47	34	1