vOTU vOTU-014148

vOTU: vOTU-014148

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014148
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00831 → vGENUS-11249 → vSUBGEN-15771 → vOTU-014148
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0124260
Biosample ID	N/A
Genome length (bp)	52,650 bps
CheckV completeness	99.08% (High-quality)
CDS count	60
CDS density	93.58%
tRNA count	6
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	368	Host agreement	70.38
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0124260_1	K06400	387.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0124260_1	phrog_95	369.4	0	integrase	integration and excision
UniRef90	UHGV-0124260_1	UniRef90_E8LBZ4	418.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0124260_1	626939.HMPREF9443_00357	418.0	0	overlaps another CDS with the same product name	N/A
Pfam	UHGV-0124260_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0124260_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0124260_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0124260_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0124260_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0124260_5	K22300	65.2	1.5e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0124260_5	phrog_8	72.3	1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0124260_5	UniRef90_A0A316SAV3	71.2	0.000000000000155	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0124260_5	431943.CKL_3317	69.3	0.0000000000008	transcriptional regulator	N/A
PADLOC	UHGV-0124260_5	retron_type_VI_hth_cluster2_1	46.4	0.000000000001	N/A	Retron
Pfam	UHGV-0124260_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0124260_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0124260_5	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0124260_6	K07729	52.5	0.000000000000012	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0124260_6	phrog_3	42.8	0.000000000022	transcriptional repressor	transcription regulation
UniRef90	UHGV-0124260_6	UniRef90_A0A316S6E7	73.2	0.00000000000000119	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0124260_6	1250278.JQNQ01000001_gene3158	46.6	0.00000539	transcriptional regulator	N/A
Pfam	UHGV-0124260_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0124260_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0124260_6	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_8	phrog_14367	50.2	0.000000000000019	N/A	unknown function
UniRef90	UHGV-0124260_8	UniRef90_R6WTN1	79.7	2.11e-17	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-0124260_8	478749.BRYFOR_06242	53.9	0.0000000269	LysM domain	N/A
Pfam	UHGV-0124260_8	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0124260_8	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0124260_8	MF_02014,NF010723	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_11	phrog_1366	299.9	0	N/A	unknown function
UniRef90	UHGV-0124260_11	UniRef90_UPI001EDFC883	365.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0124260_11	555779.Dthio_PD3616	263.0	0	SMART AAA ATPase	N/A
Pfam	UHGV-0124260_11	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0124260_11	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0124260_11	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_12	phrog_72	58.5	9.9e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0124260_12	445972.ANACOL_01825	116.0	3.11e-30	N/A	N/A
structural_annotation	UHGV-0124260_12	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_13	phrog_270	101.3	1.3e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0124260_13	UniRef90_UPI0011DDD220	103.0	1.48e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0124260_13	1232453.BAIF02000016_gene3127	108.0	5.87e-25	N/A	N/A
Pfam	UHGV-0124260_13	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0124260_13	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0124260_13	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
UniRef90	UHGV-0124260_14	UniRef90_A0A316S7J6	99.4	9.1e-23	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0124260_14	1280706.AUJE01000046_gene1152	70.1	0.00000000000247	N/A	N/A
structural_annotation	UHGV-0124260_14	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_16	phrog_9298	400.3	0	radical SAM domain protein	other
UniRef90	UHGV-0124260_16	UniRef90_A0A348YZK3	417.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0124260_16	755731.Clo1100_1144	361.0	0	N/A	N/A
COG	UHGV-0124260_16	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0124260_16	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_18	phrog_3878	49.7	0.000000000000069	N/A	unknown function
PHROG	UHGV-0124260_21	phrog_1384	124.2	1e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0124260_21	428125.CLOLEP_01816	177.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0124260_21	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-0124260_26	K03111	136.0	4.39999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0124260_26	phrog_44	147.7	6.44597e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0124260_26	UniRef90_R6WK64	175.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0124260_26	626939.HMPREF9443_01150	169.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0124260_26	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0124260_26	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0124260_26	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0124260_26	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0124260_26	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_27	phrog_190	148.2	4.48416e-44	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0124260_27	UniRef90_UPI0018C4B0C5	131.0	2.27e-37	N/A	N/A
eggNOG-mapper	UHGV-0124260_27	1347392.CCEZ01000043_gene417	121.0	3.96e-34	N/A	N/A
Pfam	UHGV-0124260_27	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0124260_27	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0124260_28	401526.TcarDRAFT_1279	77.8	4.35e-16	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0124260_28	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_30	phrog_2329	72.6	3.4e-21	N/A	unknown function
UniRef90	UHGV-0124260_30	UniRef90_UPI001A21AB60	65.1	0.00000000000108	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0124260_30	1120746.CCNL01000005_gene152	66.2	0.000000000000949	N/A	N/A
Pfam	UHGV-0124260_30	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
structural_annotation	UHGV-0124260_30	PF04014,NF007312,COG2336	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_31	phrog_13470	47.9	0.0000000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0124260_31	742738.HMPREF9460_00886	113.0	5.47e-27	N/A	N/A
UniRef90	UHGV-0124260_32	UniRef90_W1I432	50.1	0.00000129	Uncultured bacterium plasmid pRGI00226	N/A
eggNOG-mapper	UHGV-0124260_34	1280689.AUJC01000003_gene960	50.1	0.00000157	N/A	N/A
KOfam	UHGV-0124260_35	K07474	85.6	1.4e-24	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0124260_35	phrog_51	87.7	1.4e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0124260_35	UniRef90_A0A1I0K7H5	100.0	3.79e-24	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0124260_35	1391647.AVSV01000003_gene1801	94.4	1.47e-22	Terminase small subunit	N/A
Pfam	UHGV-0124260_35	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0124260_35	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0124260_35	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0124260_36	K06909	254.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0124260_36	phrog_3717	233.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0124260_36	UniRef90_A0A316S7L1	739.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0124260_36	1009370.ALO_12436	584.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0124260_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0124260_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0124260_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0124260_36	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0124260_37	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0124260_37	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_38	phrog_156	439.4	0	portal protein	head and packaging
UniRef90	UHGV-0124260_38	UniRef90_F7NK66	508.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0124260_38	401526.TcarDRAFT_1284	535.0	0	Tfp pilus assembly protein FimV	N/A
COG	UHGV-0124260_38	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0124260_38	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_41	phrog_334	296.0	0	major head protein	head and packaging
UniRef90	UHGV-0124260_41	UniRef90_A0A316SB53	442.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0124260_41	401526.TcarDRAFT_1286	313.0	0	N/A	N/A
Pfam	UHGV-0124260_41	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0124260_41	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0124260_41	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_42	phrog_399	48.2	0.00000000000009	structural protein	head and packaging
Pfam	UHGV-0124260_42	PF20387	N/A	N/A	N/A	DUF6682
structural_annotation	UHGV-0124260_42	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_43	phrog_26466	55.3	1e-16	N/A	unknown function
UniRef90	UHGV-0124260_43	UniRef90_G9YK55	74.3	0.000000000147	Fibronectin type III domain protein	N/A
eggNOG-mapper	UHGV-0124260_43	592028.GCWU000321_01390	118.0	2.17e-25	Putative phage tail protein	N/A
COG	UHGV-0124260_43	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0124260_44	phrog_2427	58.0	1.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0124260_44	706434.HMPREF9429_00512	61.6	0.00000000152	N/A	N/A
PHROG	UHGV-0124260_45	phrog_4062	50.1	0.000000000000035	N/A	unknown function
KOfam	UHGV-0124260_46	K16628	119.5	1.1e-35	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0124260_46	phrog_819	68.2	1.6e-32	tail protein	tail
Pfam	UHGV-0124260_46	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0124260_46	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0124260_46	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0124260_48	478749.BRYFOR_07557	55.5	0.0000056	tail collar domain protein	N/A
COG	UHGV-0124260_48	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0124260_50	phrog_2837	59.3	6.4e-17	tail protein	tail
UniRef90	UHGV-0124260_50	UniRef90_A0A3C1IQ26	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-0124260_50	1286631.X805_38770	62.8	0.000000000989	N/A	N/A
Pfam	UHGV-0124260_50	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0124260_50	PF14301	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0124260_51	883156.HMPREF9282_00569	221.0	0	N/A	N/A
structural_annotation	UHGV-0124260_51	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0124260_52	PF00765,MF_02210,NF007644,COG2153	N/A	N/A	N/A	N/A
UniRef90	UHGV-0124260_53	UniRef90_A0A1G6NNF8	155.0	1.49995e-41	Intein N-terminal splicing region	N/A
eggNOG-mapper	UHGV-0124260_53	1232428.CAVO010000067_gene416	170.0	0	N/A	N/A
PHROG	UHGV-0124260_55	phrog_10089	1690.9	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0124260_55	UniRef90_A0A6I2UJK2	1468.0	0	Transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0124260_55	278957.ABEA03000004_gene4552	1112.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0124260_55	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
Pfam	UHGV-0124260_55	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0124260_55	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-0124260_55	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0124260_55	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
eggNOG-mapper	UHGV-0124260_58	1392502.JNIO01000008_gene1280	219.0	0	N/A	N/A
structural_annotation	UHGV-0124260_58	PF21277	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0124260	Yes	52,650	45	99	1
UHGV-1560131	No	48,180	45	91	1
UHGV-1337281	No	40,960	46	77	1
UHGV-1665277	No	22,932	44	43	1
UHGV-1775678	No	17,333	47	33	1
UHGV-0188334	No	17,324	47	33	1