vOTU vOTU-014483

vOTU: vOTU-014483

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014483
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q sp000435655
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02141 → vGENUS-03056 → vSUBGEN-17472 → vOTU-014483
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eisenbergiella → Eisenbergiella tayi
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0098439
Biosample ID	SAMEA3708674
Genome length (bp)	36,618 bps
CheckV completeness	94.70% (High-quality)
CDS count	53
CDS density	94.68%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eisenbergiella → Eisenbergiella tayi	Total connections	16	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q sp000435655	Total connections	16	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0098439_1	K06400	287.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0098439_1	phrog_95	294.2	0	integrase	integration and excision
UniRef90	UHGV-0098439_1	UniRef90_R5LS99	720.0	0	Resolvase domain protein	N/A
eggNOG-mapper	UHGV-0098439_1	610130.Closa_2885	485.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0098439_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0098439_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0098439_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0098439_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0098439_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_2	phrog_16228	207.8	0	N/A	unknown function
UniRef90	UHGV-0098439_2	UniRef90_R6Z895	375.0	0	Uma2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0098439_2	478749.BRYFOR_07230	238.0	0	Putative restriction endonuclease	N/A
Pfam	UHGV-0098439_2	PF05685	N/A	N/A	Putative restriction endonuclease	Uma2
COG	UHGV-0098439_2	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0098439_2	PF05685,COG4636	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_3	phrog_7854	53.8	0.0000000000000037	endolysin	lysis
UniRef90	UHGV-0098439_3	UniRef90_A0A174X6J3	267.0	0	Lipoprotein	N/A
eggNOG-mapper	UHGV-0098439_3	720554.Clocl_3520	105.0	1.53e-24	cell wall binding repeat	N/A
Pfam	UHGV-0098439_3	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
COG	UHGV-0098439_3	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-0098439_4	phrog_1847	345.2	0	N/A	unknown function
UniRef90	UHGV-0098439_4	UniRef90_R6ZTZ7	974.0	0	T5orf172 domain-containing protein	N/A
eggNOG-mapper	UHGV-0098439_4	1256908.HMPREF0373_00641	474.0	0	T5orf172	N/A
Pfam	UHGV-0098439_4	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0098439_4	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0098439_4	PF13250,NF041454	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_5	phrog_87	101.2	6.8e-30	metallo-protease	other
UniRef90	UHGV-0098439_5	UniRef90_R6ZEH8	313.0	0	Putative toxin-antitoxin system toxin component	N/A
eggNOG-mapper	UHGV-0098439_5	1235802.C823_04751	171.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0098439_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0098439_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0098439_5	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_6	phrog_8	57.2	4.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098439_6	UniRef90_R6ZMD8	273.0	0	Toxin-antitoxin system antitoxin component Xre family	N/A
eggNOG-mapper	UHGV-0098439_6	1235802.C823_04750	120.0	3.13e-33	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0098439_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0098439_6	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_7	phrog_8	49.2	0.00000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098439_7	UniRef90_A0A416G2X0	84.7	1.97e-20	XRE family transcriptional regulator	N/A
Pfam	UHGV-0098439_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0098439_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0098439_7	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0098439_10	610130.Closa_2884	46.2	0.00000296	N/A	N/A
KOfam	UHGV-0098439_14	K03698	44.3	0.000000000002	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0098439_14	phrog_5889	95.7	2.9e-28	N/A	unknown function
UniRef90	UHGV-0098439_14	UniRef90_UPI001BC25CB7	407.0	0	HD family phosphohydrolase	N/A
eggNOG-mapper	UHGV-0098439_14	411468.CLOSCI_00316	240.0	0	Metal dependent phosphohydrolases with conserved 'HD' motif.	N/A
Pfam	UHGV-0098439_14	PF01966	N/A	N/A	HD domain	HD
NCBIFam	UHGV-0098439_14	TIGR00277.1	N/A	N/A	HDIG domain-containing protein	N/A
COG	UHGV-0098439_14	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0098439_14	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_15	phrog_14970	304.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0098439_15	411470.RUMGNA_02193	233.0	0	double-strand break repair protein	N/A
COG	UHGV-0098439_15	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0098439_15	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_16	phrog_72	55.8	7.3e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0098439_16	411468.CLOSCI_00314	141.0	4.63e-40	N/A	N/A
structural_annotation	UHGV-0098439_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_17	phrog_7566	88.5	4.9e-26	N/A	unknown function
UniRef90	UHGV-0098439_17	UniRef90_A0A417GG52	211.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0098439_17	1304866.K413DRAFT_1198	63.9	0.00000000000552	N/A	N/A
PHROG	UHGV-0098439_18	phrog_19658	131.6	4.1e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098439_18	UniRef90_UPI001D090F0C	181.0	0	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0098439_18	742740.HMPREF9474_03492	212.0	0	DnaD domain protein	N/A
COG	UHGV-0098439_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0098439_18	PF03444,MF_01911,TIGR01610,COG5529	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098439_19	PF04703,MF_01909,NF033788,COG0640	N/A	N/A	N/A	N/A
UniRef90	UHGV-0098439_21	UniRef90_R7AV01	191.0	0	LexA_DNA_bind domain-containing protein	N/A
Pfam	UHGV-0098439_21	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
structural_annotation	UHGV-0098439_21	PF01726,MF_00732,NF008273,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_24	phrog_15198	69.1	7e-20	N/A	unknown function
UniRef90	UHGV-0098439_24	UniRef90_UPI001BC026BF	142.0	6.26997e-41	N/A	N/A
eggNOG-mapper	UHGV-0098439_24	411462.DORLON_00804	82.0	1.6e-18	N/A	N/A
Pfam	UHGV-0098439_24	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0098439_24	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_25	phrog_6568	60.6	2.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0098439_25	1203606.HMPREF1526_00241	47.4	0.00000287	N/A	N/A
UniRef90	UHGV-0098439_26	UniRef90_R6ZHB9	191.0	0	Putative bacteriocin ABC transporter	N/A
eggNOG-mapper	UHGV-0098439_26	411902.CLOBOL_06327	88.6	1.08e-20	N/A	N/A
structural_annotation	UHGV-0098439_26	PF19962,COG1579	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_27	phrog_36	56.1	8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098439_27	UniRef90_UPI001BBBDD49	260.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0098439_27	742740.HMPREF9474_03497	177.0	0	N/A	N/A
structural_annotation	UHGV-0098439_27	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0098439_29	K07474	150.2	2.24208e-44	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0098439_29	phrog_51	142.4	2.49992e-42	terminase small subunit	head and packaging
UniRef90	UHGV-0098439_29	UniRef90_A0A3R6UIT1	301.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0098439_29	1321778.HMPREF1982_02686	204.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0098439_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0098439_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0098439_29	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0098439_30	K06909	92.1	7.9e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0098439_30	phrog_2	87.0	3.5e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0098439_30	UniRef90_UPI000B896FAD	780.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0098439_30	1282664.H354_06621	662.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0098439_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0098439_30	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_31	phrog_533	282.6	0	portal protein	head and packaging
UniRef90	UHGV-0098439_31	UniRef90_R7AJB6	966.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0098439_31	742740.HMPREF9474_03501	769.0	0	N/A	N/A
structural_annotation	UHGV-0098439_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_32	phrog_25639	127.1	3.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0098439_32	742740.HMPREF9474_03502	101.0	2.39e-27	N/A	N/A
PHROG	UHGV-0098439_33	phrog_581	250.9	0	minor head protein	head and packaging
UniRef90	UHGV-0098439_33	UniRef90_A0A416KE36	637.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0098439_33	742740.HMPREF9474_03503	483.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0098439_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0098439_33	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_35	phrog_3675	100.7	7.4e-30	N/A	unknown function
UniRef90	UHGV-0098439_35	UniRef90_A0A3E2UCU7	207.0	0	Dihydrolipoyl dehydrogenase	N/A
eggNOG-mapper	UHGV-0098439_35	585501.HMPREF6123_0838	129.0	9.98e-38	YjcQ protein	N/A
Pfam	UHGV-0098439_35	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0098439_35	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_36	phrog_774	61.9	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0098439_36	397290.C810_05225	111.0	5.86e-31	N/A	N/A
PHROG	UHGV-0098439_37	phrog_2303	139.7	2.29995e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0098439_37	1304866.K413DRAFT_0806	207.0	0	N/A	N/A
PHROG	UHGV-0098439_38	phrog_422	347.8	0	major head protein	head and packaging
UniRef90	UHGV-0098439_38	UniRef90_R6Z318	593.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0098439_38	742740.HMPREF9474_03505	502.0	0	N/A	N/A
structural_annotation	UHGV-0098439_38	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_39	phrog_1378	84.0	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0098439_39	742740.HMPREF9474_03506	80.5	1.56e-18	N/A	N/A
PHROG	UHGV-0098439_40	phrog_541	75.4	6.7e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0098439_40	1304866.K413DRAFT_0783	178.0	0	N/A	N/A
PHROG	UHGV-0098439_41	phrog_8710	141.0	3.09967e-42	N/A	unknown function
eggNOG-mapper	UHGV-0098439_41	33035.JPJF01000093_gene2249	147.0	2.24208e-44	N/A	N/A
structural_annotation	UHGV-0098439_41	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_42	phrog_556	60.5	2.9e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0098439_42	742740.HMPREF9474_03509	173.0	0	N/A	N/A
PHROG	UHGV-0098439_43	phrog_2595	91.0	1.1e-26	head-tail connector protein	connector
UniRef90	UHGV-0098439_43	UniRef90_UPI001D0627B3	154.0	1.4013e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0098439_43	33035.JPJF01000093_gene2247	156.0	0	N/A	N/A
Pfam	UHGV-0098439_43	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0098439_43	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_44	phrog_820	114.2	7.3e-34	major tail protein	tail
eggNOG-mapper	UHGV-0098439_44	33035.JPJF01000093_gene2246	242.0	0	N/A	N/A
structural_annotation	UHGV-0098439_44	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_45	phrog_8300	74.3	1.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0098439_45	742740.HMPREF9474_03512	87.4	3.26e-21	N/A	N/A
structural_annotation	UHGV-0098439_45	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_46	phrog_8355	110.5	4.5e-33	N/A	unknown function
UniRef90	UHGV-0098439_46	UniRef90_UPI000BA45828	115.0	2.75e-31	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0098439_46	33035.JPJF01000093_gene2244	105.0	1.04e-28	N/A	N/A
Pfam	UHGV-0098439_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0098439_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_47	phrog_1535	309.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0098439_47	UniRef90_A0A174SV65	761.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0098439_47	742740.HMPREF9474_03514	611.0	0	tape measure	N/A
COG	UHGV-0098439_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0098439_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_48	phrog_1194	76.1	4.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0098439_48	742740.HMPREF9474_03515	176.0	0	N/A	N/A
structural_annotation	UHGV-0098439_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_49	phrog_13879	393.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0098439_49	742740.HMPREF9474_03516	1000.0	0	N/A	N/A
structural_annotation	UHGV-0098439_49	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0098439_50	phrog_18725	101.1	5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0098439_50	1298920.KI911353_gene4838	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0098439_51	742740.HMPREF9474_03518	137.0	1.63e-39	N/A	N/A
PHROG	UHGV-0098439_52	phrog_13589	51.1	3.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0098439_52	1298920.KI911353_gene541	78.6	0.0000000000000251	ATPase involved in DNA repair	N/A
COG	UHGV-0098439_52	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0098439_52	PF21253,NF038128	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098439_53	PF21253,NF038128,COG5156	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0098439	Yes	36,618	46	95	1
UHGV-2083978	No	34,948	46	100	1
UHGV-1439931	No	19,898	47	51	1
UHGV-1731923	No	15,219	48	40	1