vOTU vOTU-014508

vOTU: vOTU-014508

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014508
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-15868 → vSUBGEN-28041 → vOTU-014508
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0107211
Biosample ID	SAMEA3708550
Genome length (bp)	37,620 bps
CheckV completeness	99.18% (High-quality)
CDS count	59
CDS density	91.20%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	809	Host agreement	98.52
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp000436475	Total connections	110	Host agreement	96.36

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0107211_1	PF04721	N/A	N/A	N/A	N/A
KOfam	UHGV-0107211_3	K04763	233.1	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0107211_3	phrog_1	181.7	0	integrase	integration and excision
UniRef90	UHGV-0107211_3	UniRef90_A0A6G5YKB8	287.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0107211_3	33035.JPJF01000058_gene3673	264.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0107211_3	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0107211_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0107211_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0107211_3	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_5	phrog_6616	157.2	0	tail protein	tail
UniRef90	UHGV-0107211_5	UniRef90_A0A8D9PGP3	529.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0107211_5	1294142.CINTURNW_1706	270.0	0	Phage minor structural protein	N/A
COG	UHGV-0107211_5	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0107211_5	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_6	phrog_1401	47.1	0.00000000000039	N/A	unknown function
structural_annotation	UHGV-0107211_6	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_7	phrog_1194	77.9	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0107211_7	33035.JPJF01000093_gene2242	157.0	0	N/A	N/A
structural_annotation	UHGV-0107211_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_8	phrog_1535	233.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0107211_8	UniRef90_A0A1C5RRP4	322.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0107211_8	742733.HMPREF9469_01814	301.0	0	tape measure	N/A
COG	UHGV-0107211_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0107211_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_9	phrog_8355	110.7	3.9e-33	N/A	unknown function
UniRef90	UHGV-0107211_9	UniRef90_UPI0006BBA9AA	148.0	7.14662e-44	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0107211_9	394503.Ccel_3036	119.0	5.06e-33	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0107211_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0107211_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_10	phrog_8300	72.7	3.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0107211_10	1151292.QEW_2425	73.9	0.00000000000000118	N/A	N/A
structural_annotation	UHGV-0107211_10	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_11	phrog_820	108.4	4.7e-32	major tail protein	tail
UniRef90	UHGV-0107211_11	UniRef90_T3DDR1	186.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0107211_11	1151292.QEW_2426	186.0	0	N/A	N/A
structural_annotation	UHGV-0107211_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_12	phrog_2595	91.2	1e-26	head-tail connector protein	connector
UniRef90	UHGV-0107211_12	UniRef90_UPI001D068DAC	140.0	3.17e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-0107211_12	742740.HMPREF9474_03510	125.0	3.13e-35	N/A	N/A
Pfam	UHGV-0107211_12	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0107211_12	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_13	phrog_556	58.4	1.1e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0107211_13	483218.BACPEC_01151	139.0	1.48e-40	N/A	N/A
PHROG	UHGV-0107211_14	phrog_8710	118.7	2.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-0107211_14	33035.JPJF01000093_gene2249	103.0	1.61e-27	N/A	N/A
structural_annotation	UHGV-0107211_14	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_15	phrog_541	65.9	6.9e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0107211_15	33035.JPJF01000093_gene2250	144.0	4.38606e-43	N/A	N/A
PHROG	UHGV-0107211_16	phrog_1378	73.3	2.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0107211_16	742740.HMPREF9474_03506	70.9	0.0000000000000131	N/A	N/A
PHROG	UHGV-0107211_17	phrog_422	359.5	0	major head protein	head and packaging
UniRef90	UHGV-0107211_17	UniRef90_A0A356C4N2	560.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0107211_17	742740.HMPREF9474_03505	475.0	0	N/A	N/A
PHROG	UHGV-0107211_18	phrog_2303	147.9	7.00649e-44	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0107211_18	483218.BACPEC_01156	147.0	8.79035e-42	N/A	N/A
PHROG	UHGV-0107211_20	phrog_373	188.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-0107211_20	UniRef90_A0A3D5LSU5	406.0	0	Phage regulatory protein	N/A
eggNOG-mapper	UHGV-0107211_20	1499683.CCFF01000014_gene3944	201.0	0	ORF6C domain	N/A
Pfam	UHGV-0107211_20	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0107211_20	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-0107211_20	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0107211_20	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0107211_20	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0107211_21	UniRef90_A0A358PKZ1	79.3	1.78e-18	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0107211_21	1235793.C809_02220	68.9	0.00000000000000464	N/A	N/A
structural_annotation	UHGV-0107211_21	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_23	phrog_581	245.3	0	minor head protein	head and packaging
UniRef90	UHGV-0107211_23	UniRef90_A0A3D5LQU4	628.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0107211_23	33035.JPJF01000093_gene2255	445.0	0	N/A	N/A
Pfam	UHGV-0107211_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0107211_23	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0107211_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_24	phrog_533	277.6	0	portal protein	head and packaging
UniRef90	UHGV-0107211_24	UniRef90_A0A3D5LTG9	954.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0107211_24	33035.JPJF01000093_gene2257	573.0	0	N/A	N/A
structural_annotation	UHGV-0107211_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0107211_25	K06909	95.8	5.8e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0107211_25	phrog_2	69.3	9.2e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0107211_25	UniRef90_A0A413YU24	892.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0107211_25	1391647.AVSV01000003_gene1802	520.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0107211_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0107211_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0107211_25	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0107211_26	UniRef90_A0Q0G4	56.2	0.0000000105	Phage Terminase Small Subunit	N/A
eggNOG-mapper	UHGV-0107211_26	386415.NT01CX_2043	56.2	0.00000000176	Terminase small subunit	N/A
COG	UHGV-0107211_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0107211_27	K07474	132.1	7.8e-39	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0107211_27	phrog_51	129.0	3.6e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0107211_27	UniRef90_A0A356C6K0	201.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0107211_27	1499683.CCFF01000014_gene3916	115.0	2.28e-30	Terminase small subunit	N/A
Pfam	UHGV-0107211_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0107211_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0107211_30	phrog_10226	192.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0107211_30	431943.CKL_3226	184.0	0	N/A	N/A
structural_annotation	UHGV-0107211_30	COG4127	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_31	phrog_36	60.4	4.1e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0107211_31	397290.C810_01391	103.0	2.18e-26	N/A	N/A
structural_annotation	UHGV-0107211_31	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0107211_37	478749.BRYFOR_07594	54.7	0.000000416	N/A	N/A
PHROG	UHGV-0107211_39	phrog_1891	187.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107211_39	UniRef90_A0A3D5LV28	545.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0107211_39	1282664.H354_06526	150.0	1.51004e-41	HNH endonuclease	N/A
Pfam	UHGV-0107211_39	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0107211_39	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_40	phrog_2044	110.1	8.5e-33	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0107211_40	1449126.JQKL01000051_gene3179	77.4	8.8e-18	N/A	N/A
structural_annotation	UHGV-0107211_40	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_41	phrog_17690	110.1	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-0107211_41	33035.JPJF01000123_gene2433	97.1	3.7e-24	N/A	N/A
PHROG	UHGV-0107211_42	phrog_7566	96.0	2.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0107211_42	508419.F8J187_9CAUD	73.6	0.00000000000000102	N/A	N/A
structural_annotation	UHGV-0107211_43	PF02179,NF011863	N/A	N/A	N/A	N/A
KOfam	UHGV-0107211_44	K03469	68.3	1.7e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0107211_44	phrog_531	60.8	3e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107211_44	UniRef90_A0A3B8UHR5	317.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0107211_44	941824.TCEL_01720	77.0	9.26e-16	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0107211_44	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0107211_44	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0107211_44	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_45	phrog_3584	155.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107211_45	UniRef90_A0A1I5LZL1	113.0	7.46e-27	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0107211_45	642492.Clole_0725	144.0	1.13e-39	N/A	N/A
structural_annotation	UHGV-0107211_45	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_49	phrog_20040	40.7	0.000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0107211_49	1538644.KO02_12130	104.0	1.22e-28	N/A	N/A
PHROG	UHGV-0107211_50	phrog_478	126.2	1.4e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0107211_50	UniRef90_A0A373Q857	175.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0107211_50	478749.BRYFOR_08526	102.0	2.14e-26	N/A	N/A
structural_annotation	UHGV-0107211_52	NF037954	N/A	N/A	N/A	N/A
KOfam	UHGV-0107211_55	K18830	47.2	0.00000000000054	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0107211_55	phrog_8	44.3	0.000000000004	transcriptional regulator	transcription regulation
UniRef90	UHGV-0107211_55	UniRef90_A0A356C4L0	117.0	1.96e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0107211_55	1161413.HMPREF1510_1296	49.3	0.00000347	Transcriptional regulator	N/A
Pfam	UHGV-0107211_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0107211_55	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0107211_55	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0107211_56	K22300	53.2	0.0000000000000072	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0107211_56	phrog_2967	53.2	0.0000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-0107211_56	UniRef90_A0A3D5LQZ9	253.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0107211_56	1262914.BN533_01956	68.2	0.000000000000726	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0107211_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0107211_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0107211_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_57	phrog_20886	46.5	0.00000000000041	N/A	unknown function
UniRef90	UHGV-0107211_57	UniRef90_A0A660M5N1	52.4	0.000000243	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0107211_57	1235798.C817_00619	48.9	0.00000322	N/A	N/A
structural_annotation	UHGV-0107211_57	PF06114	N/A	N/A	N/A	N/A
UniRef90	UHGV-0107211_58	UniRef90_UPI001C10185D	162.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0107211_58	1123263.AUKY01000072_gene2115	129.0	4.72e-35	N/A	N/A
structural_annotation	UHGV-0107211_58	PF13424,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0107211_59	phrog_2695	378.8	0	N/A	unknown function
UniRef90	UHGV-0107211_59	UniRef90_A0A174PBX4	1065.0	0	SIR2_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0107211_59	1504823.CCMM01000008_gene1082	535.0	0	NAD+ binding	N/A
PADLOC	UHGV-0107211_59	Sirtuin_Blast2	240.2	0	N/A	N/A
Pfam	UHGV-0107211_59	PF13289	N/A	N/A	SIR2-like domain	SIR2_2
COG	UHGV-0107211_59	COG0846	N/A	N/A	NAD-dependent protein deacetylase, SIR2 family	N/A
structural_annotation	UHGV-0107211_59	PF13289	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0107211	Yes	37,620	36	99	1
UHGV-2093580	No	34,718	36	92	1
UHGV-1519295	No	31,020	37	81	1
UHGV-1520401	No	29,247	37	77	1
UHGV-1810719	No	14,906	38	40	1
UHGV-1730376	No	14,904	38	40	1
UHGV-1813585	No	14,953	39	39	1
UHGV-1787477	No	12,354	38	33	1