vOTU vOTU-014697

vOTU: vOTU-014697

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014697
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → UMGS2068 → UMGS2068 sp900769635
Taxonomy (UHGV)	vFAM-00159 → vSUBFAM-03045 → vGENUS-04127 → vSUBGEN-22599 → vOTU-014697
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0001399
Biosample ID	SAMEA4766070
Genome length (bp)	33,437 bps
CheckV completeness	94.38% (High-quality)
CDS count	56
CDS density	94.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	15	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → UMGS2068 → UMGS2068 sp900769635	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0001399_1	1235802.C823_00136	127.0	6.4e-34	N/A	N/A
PHROG	UHGV-0001399_2	phrog_6988	107.9	6.7e-32	N/A	unknown function
UniRef90	UHGV-0001399_2	UniRef90_G5F8B5	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0001399_2	635013.TherJR_2008	127.0	1.27e-35	N/A	N/A
PADLOC	UHGV-0001399_2	ThsB1_00013	44.1	0.0000000000072	TIR-like	Thoeris
Pfam	UHGV-0001399_2	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0001399_2	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_3	K22299	70.5	3.9e-20	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0001399_3	phrog_8	75.0	1.5e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0001399_3	UniRef90_UPI001BCE5B8B	79.3	1.9e-16	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0001399_3	340099.Teth39_2244	72.4	0.0000000000000117	transcriptional regulator, XRE family	N/A
PADLOC	UHGV-0001399_3	retron_type_VI_hth_cluster2_1	48.7	0.00000000000025	N/A	Retron
Pfam	UHGV-0001399_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0001399_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0001399_3	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001399_4	UniRef90_A0A3D0X5L0	66.2	0.00000000000113	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0001399_4	272563.CD630_09071	60.5	0.0000000000128	sequence-specific DNA binding	N/A
Pfam	UHGV-0001399_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0001399_4	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0001399_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_5	phrog_989	45.6	0.00000000000082	N/A	unknown function
eggNOG-mapper	UHGV-0001399_5	1540257.JQMW01000013_gene708	47.4	0.00000183	N/A	N/A
structural_annotation	UHGV-0001399_5	PF11372	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_9	K02086	64.7	1.5e-18	dnaD; DNA replication protein	N/A
PHROG	UHGV-0001399_9	phrog_186	97.8	1.5e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001399_9	UniRef90_A0A318KSV9	130.0	3.64e-33	DnaD/phage-associated family protein	N/A
eggNOG-mapper	UHGV-0001399_9	428127.EUBDOL_01512	120.0	8.38e-30	DnaD domain protein	N/A
Pfam	UHGV-0001399_9	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0001399_9	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0001399_9	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0001399_9	PF10771,MF_01177,TIGR01610,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_10	phrog_674	74.4	1.7e-21	N/A	unknown function
UniRef90	UHGV-0001399_10	UniRef90_A0A374N9T8	108.0	1.04e-23	N/A	N/A
eggNOG-mapper	UHGV-0001399_10	1408437.JNJN01000039_gene373	105.0	8.3e-24	N/A	N/A
Pfam	UHGV-0001399_10	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0001399_10	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_11	K07455	193.1	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0001399_11	phrog_148	223.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001399_11	UniRef90_UPI00137B13AE	361.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0001399_11	1095750.HMPREF9970_1675	308.0	0	RecT family	N/A
Pfam	UHGV-0001399_11	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0001399_11	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0001399_11	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0001399_11	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_12	K06167	45.9	0.00000000000053	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0001399_12	phrog_392	122.5	4.8e-36	metal-dependent hydrolase	other
UniRef90	UHGV-0001399_12	UniRef90_A0A353JB44	300.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0001399_12	665956.HMPREF1032_03101	181.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0001399_12	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0001399_12	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0001399_12	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_15	K03111	108.0	1.5e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0001399_15	phrog_44	120.8	1.2e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001399_15	UniRef90_A0A350H2L8	116.0	1.43e-30	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0001399_15	698758.AXY_23960	102.0	1.41e-25	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0001399_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0001399_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0001399_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0001399_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0001399_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_18	K07741	211.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0001399_18	phrog_63	173.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0001399_18	UniRef90_A0A1C6EMR2	312.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0001399_18	1035196.HMPREF9998_01733	292.0	0	N/A	N/A
Pfam	UHGV-0001399_18	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0001399_18	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0001399_18	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0001399_18	PF03374,PF08346,TIGR02681,TIGR04176,COG3561,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_19	K01160	44.3	0.0000000000051	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0001399_19	phrog_1682	52.1	0.000000000000012	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001399_19	UniRef90_G4D5I8	54.3	0.000000633	Prophage Lp2 protein 24	N/A
eggNOG-mapper	UHGV-0001399_19	997350.HMPREF9129_1668	54.3	0.000000106	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
Pfam	UHGV-0001399_19	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0001399_19	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0001399_19	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_20	phrog_1233	41.9	0.000000000016	N/A	unknown function
UniRef90	UHGV-0001399_20	UniRef90_R7IWF8	108.0	3.56e-28	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-0001399_20	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0001399_20	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_24	phrog_10455	76.7	2.6e-22	N/A	unknown function
UniRef90	UHGV-0001399_24	UniRef90_R7IT47	159.0	0	Conserved domain protein	N/A
KOfam	UHGV-0001399_26	K03744	156.9	0	lemA; LemA protein	N/A
PHROG	UHGV-0001399_26	phrog_1383	133.5	1.1e-39	virion structural protein	head and packaging
UniRef90	UHGV-0001399_26	UniRef90_A0A1Q6M2C0	203.0	0	LemA family protein	N/A
eggNOG-mapper	UHGV-0001399_26	742735.HMPREF9467_00879	157.0	0	LemA family	N/A
Pfam	UHGV-0001399_26	PF04011	N/A	N/A	LemA family	LemA
COG	UHGV-0001399_26	COG1704	N/A	N/A	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	N/A
structural_annotation	UHGV-0001399_26	PF04011,NF040966,COG1704	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_27	phrog_3886	193.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0001399_27	1497679.EP56_05675	135.0	1.4e-35	N/A	N/A
structural_annotation	UHGV-0001399_28	PF10654	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001399_29	PF16535,PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_30	phrog_606	74.1	3.5e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0001399_30	UniRef90_A0A6M3XSH7	114.0	3.73e-30	Putative terminase small subunit	N/A
eggNOG-mapper	UHGV-0001399_30	931276.Cspa_c57180	118.0	1.32e-32	DNA-packaging protein gp3	N/A
Pfam	UHGV-0001399_30	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0001399_30	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0001399_31	K06909	202.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0001399_31	phrog_3717	124.2	9.9e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0001399_31	UniRef90_A0A6N7QVH7	285.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0001399_31	40522.A8ASJ2_BPA50	268.0	0	Pfam:Terminase_3C	N/A
Pfam	UHGV-0001399_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0001399_31	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0001399_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
structural_annotation	UHGV-0001399_31	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_32	phrog_533	346.9	0	portal protein	head and packaging
UniRef90	UHGV-0001399_32	UniRef90_I3DY03	281.0	0	Putative portal protein	N/A
eggNOG-mapper	UHGV-0001399_32	997296.PB1_16244	281.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0001399_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0001399_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_33	phrog_581	266.9	0	minor head protein	head and packaging
UniRef90	UHGV-0001399_33	UniRef90_A0A6N7QW86	221.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0001399_33	997296.PB1_16234	207.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0001399_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0001399_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001399_33	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_35	phrog_918	120.8	4e-36	N/A	unknown function
UniRef90	UHGV-0001399_35	UniRef90_UPI00115A7D93	127.0	2.02e-36	N/A	N/A
eggNOG-mapper	UHGV-0001399_35	469618.FVAG_01307	129.0	3.89e-38	N/A	N/A
Pfam	UHGV-0001399_35	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0001399_35	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_36	phrog_2303	53.6	7.5e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0001399_36	UniRef90_W7YV79	57.0	0.000000894	N/A	N/A
eggNOG-mapper	UHGV-0001399_36	1460640.JCM19046_3518	57.0	0.00000015	N/A	N/A
UniRef90	UHGV-0001399_37	UniRef90_D4LDZ8	148.0	9.65e-38	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0001399_37	411471.SUBVAR_06993	159.0	1.49939e-43	N/A	N/A
Pfam	UHGV-0001399_37	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
PHROG	UHGV-0001399_40	phrog_793	67.5	1.9e-19	head-tail adaptor	connector
UniRef90	UHGV-0001399_40	UniRef90_UPI001A9D18B6	57.8	0.0000000172	putative minor capsid protein	N/A
eggNOG-mapper	UHGV-0001399_40	935836.JAEL01000021_gene1491	49.7	0.00000383	Minor capsid protein	N/A
Pfam	UHGV-0001399_40	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0001399_40	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0001399_40	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_41	phrog_556	58.3	1.4e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-0001399_41	935836.JAEL01000086_gene48	53.1	0.00000025	Minor capsid protein	N/A
PHROG	UHGV-0001399_42	phrog_2595	41.6	0.000000000019	head-tail connector protein	connector
Pfam	UHGV-0001399_42	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
PHROG	UHGV-0001399_45	phrog_706	49.4	0.00000000000007	N/A	unknown function
Pfam	UHGV-0001399_45	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0001399_46	phrog_1272	392.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0001399_46	573061.Clocel_3533	276.0	0	tail tape measure protein	N/A
Pfam	UHGV-0001399_46	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0001399_46	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0001399_46	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0001399_46	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001399_47	1188235.MBVG_6920	95.1	5.74e-18	N/A	N/A
structural_annotation	UHGV-0001399_47	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001399_48	PF18975,MF_03022,TIGR04528,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_49	phrog_24267	67.0	3.7e-19	N/A	unknown function
UniRef90	UHGV-0001399_49	UniRef90_R5LPM8	57.4	0.000000186	Putative truncated prophage LambdaSa1 minor structural protein	N/A
eggNOG-mapper	UHGV-0001399_49	1035184.HMPREF1042_1210	73.9	0.000000000000629	N/A	N/A
COG	UHGV-0001399_49	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0001399_49	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0001399_51	phrog_1863	64.8	8.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0001399_51	768486.EHR_09640	54.7	0.00000000454	N/A	N/A
KOfam	UHGV-0001399_53	K01447	106.4	4e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0001399_53	phrog_3088	243.9	0	amidase	lysis
UniRef90	UHGV-0001399_53	UniRef90_A0A3E3JYJ7	252.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0001399_53	428125.CLOLEP_01782	218.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0001399_53	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0001399_53	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0001399_53	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001399_56	1284352.AOIG01000022_gene3821	104.0	1.38e-22	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0001399_56	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0001399_56	PF01832,NF007681,COG1705	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0001399	Yes	33,437	30	94	1
UHGV-0000675	No	35,247	30	99	1