vOTU vOTU-014735

vOTU: vOTU-014735

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014735
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-03111 → vGENUS-04277 → vSUBGEN-43478 → vOTU-014735
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp003525905
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0190601
Biosample ID	SAMEA2737816
Genome length (bp)	42,516 bps
CheckV completeness	99.90% (High-quality)
CDS count	57
CDS density	92.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp003525905	Total connections	166	Host agreement	91.57
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0190601_1	K00820	396.9	0	glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]	N/A
PHROG	UHGV-0190601_1	phrog_13807	428.7	0	N/A	unknown function
UniRef90	UHGV-0190601_1	UniRef90_A0A3D4MTK2	656.0	0	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	N/A
eggNOG-mapper	UHGV-0190601_1	552398.HMPREF0866_01985	402.0	0	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	N/A
Pfam	UHGV-0190601_1	PF13522	N/A	N/A	Glutamine amidotransferase domain	GATase_6
NCBIFam	UHGV-0190601_1	NF001484.0	N/A	N/A	isomerizing glutamine--fructose-6-phosphate transaminase	N/A
COG	UHGV-0190601_1	COG0449	N/A	N/A	Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains	N/A
PHROG	UHGV-0190601_2	phrog_2563	41.7	0.0000000000064	N/A	unknown function
eggNOG-mapper	UHGV-0190601_2	1408437.JNJN01000060_gene452	322.0	0	heme binding	N/A
COG	UHGV-0190601_2	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0190601_4	1519439.JPJG01000011_gene57	110.0	5.88e-29	N/A	N/A
structural_annotation	UHGV-0190601_4	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0190601_5	UniRef90_A0A4D7ASB8	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-0190601_5	693746.OBV_01680	382.0	0	N/A	N/A
structural_annotation	UHGV-0190601_5	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_6	K06909	126.9	1.9e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0190601_6	phrog_979	140.1	8.60397e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0190601_6	UniRef90_A0A6A8VHX7	556.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0190601_6	693746.OBV_01690	543.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0190601_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0190601_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0190601_6	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_9	K01447	59.4	6.9e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0190601_9	phrog_15001	162.5	0	endolysin	lysis
UniRef90	UHGV-0190601_9	UniRef90_A0A7X7U879	199.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0190601_9	1235835.C814_01292	210.0	0	Ami_2	N/A
Pfam	UHGV-0190601_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0190601_9	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0190601_9	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0190601_9	PF18342,PF01510,NF041850,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_10	phrog_2428	136.3	9.70007e-41	N/A	unknown function
UniRef90	UHGV-0190601_10	UniRef90_UPI0019D0F68F	143.0	5.04047e-42	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0190601_10	1009370.ALO_12376	132.0	9.32e-38	N/A	N/A
dbAPIS	UHGV-0190601_10	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
KOfam	UHGV-0190601_12	K20846	62.2	6.1e-18	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0190601_12	phrog_215	87.5	1.5e-25	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-0190601_12	1449050.JNLE01000003_gene1165	86.7	0.0000000000000112	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-0190601_12	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
Pfam	UHGV-0190601_12	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0190601_12	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0190601_12	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_13	phrog_30034	108.7	7e-32	N/A	unknown function
UniRef90	UHGV-0190601_13	UniRef90_A0A3D1XGA4	214.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0190601_13	1122971.BAME01000151_gene6566	94.0	1.62e-21	N/A	N/A
Pfam	UHGV-0190601_13	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0190601_15	phrog_156	117.7	8.3e-36	portal protein	head and packaging
eggNOG-mapper	UHGV-0190601_15	693746.OBV_01670	578.0	0	N/A	N/A
structural_annotation	UHGV-0190601_15	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_17	phrog_422	155.6	0	major head protein	head and packaging
UniRef90	UHGV-0190601_17	UniRef90_A0A6A8VJ17	310.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0190601_17	755731.Clo1100_2434	207.0	0	N/A	N/A
Pfam	UHGV-0190601_17	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0190601_17	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0190601_21	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_22	phrog_10415	40.9	0.0000000000044	N/A	unknown function
COG	UHGV-0190601_22	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
UniRef90	UHGV-0190601_25	UniRef90_UPI00164AED9E	71.2	0.000000000000154	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0190601_25	1235798.C817_04600	57.0	0.0000000086	N/A	N/A
Pfam	UHGV-0190601_25	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0190601_25	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_27	K18830	65.6	1.1e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0190601_27	phrog_8	56.0	9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0190601_27	UniRef90_A0A3D3T8Y1	124.0	3.63e-34	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0190601_27	1235797.C816_03553	116.0	2.21e-31	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0190601_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0190601_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0190601_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0190601_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0190601_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0190601_36	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_40	phrog_3136	110.9	3.2e-33	N/A	unknown function
UniRef90	UHGV-0190601_40	UniRef90_UPI001C00EDA4	134.0	2.61e-36	ASCH domain-containing protein	N/A
COG	UHGV-0190601_40	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0190601_40	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_41	phrog_355	57.7	1.6e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0190601_41	UniRef90_A0A2V2FSM6	76.6	9.7e-16	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0190601_41	40631.O64365_BPN15	73.6	0.00000000000000242	N/A	N/A
Pfam	UHGV-0190601_41	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0190601_41	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0190601_42	1123304.AQYA01000037_gene207	52.8	0.000000355	DNA methylase	N/A
COG	UHGV-0190601_42	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0190601_43	K00571	66.2	5.9e-19	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0190601_43	phrog_67	70.2	3.1e-20	DNA methyltransferase	other
UniRef90	UHGV-0190601_43	UniRef90_A0A8D9PDC5	238.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0190601_43	1268240.ATFI01000007_gene431	158.0	0	DNA methylase	N/A
PADLOC	UHGV-0190601_43	MTase_II_00172	126.9	2e-37	Type II methyltransferase	RM
Pfam	UHGV-0190601_43	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0190601_43	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0190601_43	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_47	phrog_674	125.4	4.8e-37	N/A	unknown function
UniRef90	UHGV-0190601_47	UniRef90_UPI000553F60F	134.0	8.08e-34	N/A	N/A
eggNOG-mapper	UHGV-0190601_47	1408437.JNJN01000039_gene373	134.0	1.36e-34	N/A	N/A
Pfam	UHGV-0190601_47	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0190601_47	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_48	phrog_21649	132.2	1.4e-39	N/A	unknown function
UniRef90	UHGV-0190601_48	UniRef90_A0A3D4KYY8	182.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0190601_48	357809.Cphy_2988	178.0	0	ERF superfamily	N/A
Pfam	UHGV-0190601_48	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0190601_48	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0190601_48	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_49	K06167	61.7	1.1e-17	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0190601_49	phrog_392	96.9	2.8e-28	metal-dependent hydrolase	other
UniRef90	UHGV-0190601_49	UniRef90_R6LWZ4	139.0	2.43e-37	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0190601_49	665956.HMPREF1032_03101	134.0	1.8e-36	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0190601_49	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0190601_49	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0190601_49	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0190601_50	phrog_15768	42.1	0.000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0190601_50	888059.HMPREF9071_2037	65.5	0.0000000000488	N/A	N/A
Pfam	UHGV-0190601_50	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0190601_50	PF19808	N/A	N/A	N/A	N/A
Pfam	UHGV-0190601_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0190601_52	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
KOfam	UHGV-0190601_54	K03111	95.8	8.2e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0190601_54	phrog_44	107.2	1.9e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0190601_54	UniRef90_A0A352RPR0	118.0	1.82e-31	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0190601_54	1378168.N510_01674	114.0	3.52e-30	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0190601_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0190601_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0190601_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0190601_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0190601_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_55	K01160	57.4	4.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0190601_55	phrog_140	120.9	8.6e-36	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0190601_55	UniRef90_A0A354YVN8	126.0	7.09e-35	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0190601_55	1123263.AUKY01000072_gene2102	119.0	1.72e-32	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0190601_55	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0190601_55	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0190601_55	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0190601_57	K14059	147.0	2.39622e-43	int; integrase	N/A
PHROG	UHGV-0190601_57	phrog_1	166.2	0	integrase	integration and excision
UniRef90	UHGV-0190601_57	UniRef90_G4L1F4	176.0	0	Putative integrase	N/A
eggNOG-mapper	UHGV-0190601_57	693746.OBV_19730	176.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0190601_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0190601_57	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0190601_57	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0190601	Yes	42,516	60	100	1
UHGV-0081485	No	43,481	60	100	1
UHGV-0105704	No	40,559	61	100	1
UHGV-1607838	No	16,491	60	42	1
UHGV-1808038	No	16,000	60	41	1