vOTU vOTU-014778

vOTU: vOTU-014778

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014778
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-03703 → vGENUS-05688 → vSUBGEN-16715 → vOTU-014778
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0100981
Biosample ID	N/A
Genome length (bp)	43,486 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	91.92%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	19	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715	Total connections	21	Host agreement	71.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0100981_1	UniRef90_R6IC12	181.0	0	Antitoxin	N/A
eggNOG-mapper	UHGV-0100981_1	1408437.JNJN01000061_gene361	141.0	7.97339e-43	Antitoxin Phd_YefM, type II toxin-antitoxin system	N/A
Pfam	UHGV-0100981_1	PF02604	N/A	N/A	Antitoxin Phd_YefM, type II toxin-antitoxin system	PhdYeFM_antitox
NCBIFam	UHGV-0100981_1	TIGR01552.1	N/A	N/A	type II toxin-antitoxin system prevent-host-death family antitoxin	N/A
COG	UHGV-0100981_1	COG2161	N/A	N/A	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	N/A
KOfam	UHGV-0100981_2	K19092	50.0	0.000000000000079	parE1_3_4; toxin ParE1/3/4	N/A
PHROG	UHGV-0100981_2	phrog_2455	50.1	0.00000000000005	N/A	unknown function
UniRef90	UHGV-0100981_2	UniRef90_R6I1M6	206.0	0	Toxin-antitoxin system toxin component RelE family	N/A
eggNOG-mapper	UHGV-0100981_2	1408437.JNJN01000061_gene362	142.0	5.64723e-43	PFAM plasmid stabilization system	N/A
Pfam	UHGV-0100981_2	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-0100981_2	COG3668	N/A	N/A	Plasmid stabilization system protein ParE	N/A
structural_annotation	UHGV-0100981_2	PF05016,TIGR00053,COG3668	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0100981_4	715451.ambt_14505	84.3	0.00000000000000301	N/A	N/A
KOfam	UHGV-0100981_6	K18830	71.7	1.3e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0100981_6	phrog_8	58.1	2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0100981_6	UniRef90_R6I1M1	144.0	4.93958e-42	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0100981_6	887325.HMPREF0381_0352	109.0	2.94e-29	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0100981_6	retron_type_VI_hth_cluster2_1	46.7	0.00000000000035	N/A	Retron
Pfam	UHGV-0100981_6	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0100981_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0100981_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_10	phrog_26314	43.3	0.000000000005	N/A	unknown function
PHROG	UHGV-0100981_11	phrog_7566	95.6	2.8e-28	N/A	unknown function
UniRef90	UHGV-0100981_11	UniRef90_A0A8D9UHC0	117.0	5.34e-32	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0100981_11	693746.OBV_24070	131.0	3.94e-38	N/A	N/A
UniRef90	UHGV-0100981_14	UniRef90_R6IFA4	355.0	0	Hydrolase_2 domain-containing protein	N/A
COG	UHGV-0100981_14	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0100981_14	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_18	phrog_36399	114.9	3.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0100981_18	1007096.BAGW01000031_gene116	108.0	4.81e-29	N/A	N/A
PHROG	UHGV-0100981_19	phrog_8470	242.3	0	N/A	unknown function
UniRef90	UHGV-0100981_19	UniRef90_UPI0019580896	404.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0100981_19	1226322.HMPREF1545_00100	385.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0100981_19	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0100981_19	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_20	phrog_15609	280.2	0	N/A	unknown function
UniRef90	UHGV-0100981_20	UniRef90_UPI001C12751D	129.0	3.17e-31	N/A	N/A
eggNOG-mapper	UHGV-0100981_20	1378168.N510_01841	135.0	8.95e-34	N/A	N/A
Pfam	UHGV-0100981_20	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0100981_20	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0100981_20	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_29	phrog_3584	171.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0100981_29	693746.OBV_25240	94.0	3.9e-20	N/A	N/A
structural_annotation	UHGV-0100981_29	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_30	phrog_606	66.1	6e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0100981_30	UniRef90_UPI000FDB1B0C	60.5	0.0000000274	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0100981_30	1226322.HMPREF1545_03842	104.0	1.21e-25	DNA-packaging protein gp3	N/A
Pfam	UHGV-0100981_30	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0100981_30	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0100981_31	K06909	239.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0100981_31	phrog_3717	210.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0100981_31	UniRef90_H7BW36	870.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0100981_31	1226322.HMPREF1545_03843	647.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0100981_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0100981_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0100981_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0100981_31	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_32	phrog_156	289.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0100981_32	1519439.JPJG01000060_gene1886	694.0	0	N/A	N/A
structural_annotation	UHGV-0100981_32	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_33	phrog_30605	44.1	0.0000000000035	N/A	unknown function
PHROG	UHGV-0100981_34	phrog_35275	172.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0100981_34	1226322.HMPREF1545_03846	141.0	4.62e-37	N/A	N/A
PHROG	UHGV-0100981_35	phrog_24113	198.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0100981_35	1226322.HMPREF1545_03847	179.0	0	N/A	N/A
structural_annotation	UHGV-0100981_35	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_36	phrog_371	159.0	0	major head protein	head and packaging
UniRef90	UHGV-0100981_36	UniRef90_A0A8F2JBL2	308.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0100981_36	1226322.HMPREF1545_03848	509.0	0	N/A	N/A
Pfam	UHGV-0100981_36	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0100981_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0100981_38	K03646	43.1	0.000000000009	tolA; colicin import membrane protein	N/A
PHROG	UHGV-0100981_38	phrog_12105	104.8	3.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0100981_38	1226322.HMPREF1545_03850	95.9	1.15e-20	N/A	N/A
PHROG	UHGV-0100981_39	phrog_37900	234.1	0	N/A	unknown function
UniRef90	UHGV-0100981_39	UniRef90_UPI00110725F0	370.0	0	N/A	N/A
eggNOG-mapper	UHGV-0100981_39	552398.HMPREF0866_03098	206.0	0	N/A	N/A
Pfam	UHGV-0100981_39	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
COG	UHGV-0100981_39	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0100981_39	PF19190,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100981_41	UniRef90_R6I1X1	169.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-0100981_41	552398.HMPREF0866_01159	108.0	6.49e-28	N/A	N/A
PHROG	UHGV-0100981_42	phrog_774	70.6	2.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0100981_42	397290.C810_05225	66.2	0.000000000000675	N/A	N/A
KOfam	UHGV-0100981_43	K01447	59.8	5.8e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0100981_43	phrog_7698	168.7	0	endolysin	lysis
UniRef90	UHGV-0100981_43	UniRef90_D6QWN4	258.0	0	PlyM20	N/A
eggNOG-mapper	UHGV-0100981_43	1203606.HMPREF1526_01931	239.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0100981_43	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0100981_43	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0100981_43	PF01510,MF_04111,NF008758	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_44	phrog_199	64.8	1e-18	holin	lysis
UniRef90	UHGV-0100981_44	UniRef90_R5AT18	152.0	9.80909e-45	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0100981_44	1121344.JHZO01000003_gene684	138.0	7e-40	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0100981_44	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0100981_44	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0100981_44	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0100981_44	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_45	phrog_1899	72.2	3.4e-21	N/A	unknown function
UniRef90	UHGV-0100981_45	UniRef90_UPI00110693DB	167.0	2.8026e-45	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0100981_45	1226322.HMPREF1545_00783	92.4	6.71e-18	Chaperone of endosialidase	N/A
Pfam	UHGV-0100981_45	PF07902	N/A	N/A	gp58-like protein	Gp58
structural_annotation	UHGV-0100981_45	PF07902,NF041249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0100981_46	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0100981_47	phrog_511	257.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0100981_47	1226322.HMPREF1545_00785	576.0	0	N/A	N/A
structural_annotation	UHGV-0100981_47	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0100981_48	1226322.HMPREF1545_00786	207.0	0	N/A	N/A
PHROG	UHGV-0100981_49	phrog_13543	43.2	4.7e-25	N/A	unknown function
UniRef90	UHGV-0100981_49	UniRef90_A0A2V2F688	395.0	0	LPD23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0100981_49	1232449.BAHV02000016_gene1805	582.0	0	N/A	N/A
Pfam	UHGV-0100981_49	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0100981_49	PF20573	N/A	N/A	N/A	DUF6782
Pfam	UHGV-0100981_49	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
KOfam	UHGV-0100981_50	K06400	397.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0100981_50	phrog_95	422.7	0	integrase	integration and excision
UniRef90	UHGV-0100981_50	UniRef90_A0A3D4MTS8	1045.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0100981_50	397290.C810_02810	897.0	0	Recombinase	N/A
Pfam	UHGV-0100981_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0100981_50	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0100981_50	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0100981_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0100981_50	PF00239,PF07508,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0100981_51	K07171	128.9	5.2e-38	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0100981_51	phrog_1936	113.8	1.5e-33	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0100981_51	UniRef90_A0A3D4MWH4	237.0	0	mRNA interferase	N/A
eggNOG-mapper	UHGV-0100981_51	1121115.AXVN01000009_gene1509	191.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0100981_51	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0100981_51	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0100981_51	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100981_52	UniRef90_A0A3D4MUP0	273.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0100981_52	1408437.JNJN01000067_gene972	218.0	0	N/A	N/A
Pfam	UHGV-0100981_52	PF07638	N/A	N/A	ECF sigma factor	Sigma70_ECF
COG	UHGV-0100981_52	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
UniRef90	UHGV-0100981_53	UniRef90_A0A3D6BNJ9	132.0	2.33e-39	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-0100981_53	445972.ANACOL_03230	99.0	7.47e-27	Cysteine-rich KTR	N/A
Pfam	UHGV-0100981_53	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0100981_53	PF14205,NF041070	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0100981	Yes	43,486	54	100	1
UHGV-0139238	No	40,882	55	97	1
UHGV-1306579	No	26,853	56	64	1
UHGV-1449567	No	26,853	56	64	1
UHGV-1500423	No	25,921	56	60	1
UHGV-2198447	No	20,575	55	49	1
UHGV-1832124	No	11,325	56	27	1