vOTU vOTU-014832

vOTU: vOTU-014832

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-014832
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01487 → vGENUS-01499 → vSUBGEN-04700 → vOTU-014832
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0140404
Biosample ID	N/A
Genome length (bp)	36,797 bps
CheckV completeness	94.46% (High-quality)
CDS count	64
CDS density	92.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	130	Host agreement	98.46
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	71	Host agreement	98.59

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0140404_10	phrog_22529	50.0	0.00000000000004	N/A	unknown function
UniRef90	UHGV-0140404_10	UniRef90_N9V9U6	161.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_10	796942.HMPREF9623_00735	61.6	0.000000000343	3D domain protein	N/A
Pfam	UHGV-0140404_10	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0140404_10	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0140404_10	PF06725,COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0140404_12	UniRef90_N9WI31	103.0	4.09e-28	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_12	445971.ANASTE_00673	45.4	0.00000856	N/A	N/A
Pfam	UHGV-0140404_12	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0140404_12	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_15	K07699	48.5	0.00000000000011	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
UniRef90	UHGV-0140404_15	UniRef90_N9V9T9	150.0	1.4013e-45	Spo0A_C domain-containing protein	N/A
Pfam	UHGV-0140404_15	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0140404_15	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
PHROG	UHGV-0140404_17	phrog_3584	292.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0140404_17	UniRef90_A0A4P8IFK4	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0140404_17	999413.HMPREF1094_02028	608.0	0	N/A	N/A
structural_annotation	UHGV-0140404_17	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_19	K24451	123.0	2.5e-36	zim; modification methylase	N/A
PHROG	UHGV-0140404_19	phrog_67	104.1	1.1e-30	DNA methyltransferase	other
UniRef90	UHGV-0140404_19	UniRef90_A0A6N2XFY6	604.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0140404_19	908340.HMPREF9406_2596	612.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0140404_19	MTase_II_00139	109.9	4.6e-32	Type II methyltransferase	RM
Pfam	UHGV-0140404_19	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0140404_19	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0140404_20	K14440	45.7	8.9e-23	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0140404_20	phrog_62	209.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0140404_20	UniRef90_N9V9T3	913.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_20	999413.HMPREF1094_02025	913.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0140404_20	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0140404_20	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0140404_20	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0140404_20	PF06862,MF_01821,NF003426,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_22	phrog_986	130.4	7.9e-39	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0140404_22	UniRef90_H1BE95	293.0	0	N/A	N/A
eggNOG-mapper	UHGV-0140404_22	908340.HMPREF9406_2594	292.0	0	N/A	N/A
Pfam	UHGV-0140404_22	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0140404_25	PF04319,TIGR00686	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_26	phrog_599	40.0	0.000000000075	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0140404_26	UniRef90_A0A412AWF1	69.3	0.0000000000000424	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0140404_26	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0140404_26	PF14354,NF007260,COG4888	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_27	K04763	164.8	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0140404_27	phrog_1	146.8	1.90577e-43	integrase	integration and excision
UniRef90	UHGV-0140404_27	UniRef90_A0A6N2XFP5	533.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0140404_27	908340.HMPREF9406_2589	536.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0140404_27	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0140404_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0140404_27	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0140404_27	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0140404_28	269482.Bcep1808_1151	55.5	0.00000027	N/A	N/A
PHROG	UHGV-0140404_34	phrog_36	46.9	0.00000000000045	transcriptional regulator	transcription regulation
UniRef90	UHGV-0140404_34	UniRef90_A0A6N2XDS2	95.1	2.22e-23	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-0140404_34	1321779.HMPREF1984_01313	54.3	0.000000148	N/A	N/A
Pfam	UHGV-0140404_34	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0140404_34	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0140404_35	phrog_119	52.0	0.0000000000000095	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0140404_35	UniRef90_A0A414B846	164.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0140404_35	999413.HMPREF1094_02014	213.0	0	HNH nucleases	N/A
COG	UHGV-0140404_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0140404_35	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_37	phrog_361	120.7	7.3e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0140404_37	UniRef90_A0A1Y4FAU6	142.0	1.96e-41	Terminase	N/A
eggNOG-mapper	UHGV-0140404_37	908340.HMPREF9406_2581	248.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0140404_37	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0140404_37	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_38	phrog_9	292.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0140404_38	UniRef90_G1VMM3	1139.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0140404_38	908340.HMPREF9406_2580	1144.0	0	Phage Terminase	N/A
Pfam	UHGV-0140404_38	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0140404_38	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0140404_38	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0140404_38	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_39	phrog_12	175.4	0	portal protein	head and packaging
UniRef90	UHGV-0140404_39	UniRef90_A0A099I918	761.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0140404_39	908340.HMPREF9406_2579	800.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0140404_39	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0140404_39	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0140404_39	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0140404_39	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_40	K06904	138.6	5.99994e-41	N/A	N/A
PHROG	UHGV-0140404_40	phrog_80	171.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0140404_40	UniRef90_G1VMM5	365.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0140404_40	908340.HMPREF9406_2578	367.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0140404_40	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0140404_40	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0140404_40	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0140404_40	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_41	phrog_10	203.4	0	major head protein	head and packaging
UniRef90	UHGV-0140404_41	UniRef90_N9WI02	1016.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0140404_41	908340.HMPREF9406_2577	1021.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0140404_41	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0140404_41	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0140404_41	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0140404_41	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_42	phrog_2550	83.1	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0140404_42	908340.HMPREF9406_2576	177.0	0	N/A	N/A
PHROG	UHGV-0140404_43	phrog_19734	172.6	0	N/A	unknown function
UniRef90	UHGV-0140404_43	UniRef90_A0A3E5GR03	102.0	6.89e-26	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0140404_43	999413.HMPREF1094_02006	239.0	0	N/A	N/A
structural_annotation	UHGV-0140404_43	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_44	phrog_78	48.0	0.00000000000025	tail terminator	connector
eggNOG-mapper	UHGV-0140404_44	999413.HMPREF1094_02005	209.0	0	N/A	N/A
structural_annotation	UHGV-0140404_44	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0140404_45	UniRef90_R6UNR2	255.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0140404_45	908340.HMPREF9406_2573	255.0	0	N/A	N/A
structural_annotation	UHGV-0140404_45	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_46	phrog_88	109.4	3.1e-32	major tail protein	tail
UniRef90	UHGV-0140404_46	UniRef90_N9WHZ7	412.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0140404_46	33035.JPJF01000039_gene278	200.0	0	N/A	N/A
NCBIFam	UHGV-0140404_46	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0140404_46	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_48	K10402	47.6	0.0000000000000029	KIF20; kinesin family member 20	N/A
PHROG	UHGV-0140404_48	phrog_5218	522.6	0	N/A	unknown function
UniRef90	UHGV-0140404_48	UniRef90_N9V933	1770.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_48	908340.HMPREF9406_2570	1972.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0140404_48	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0140404_48	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0140404_48	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_49	phrog_33	69.2	1.1e-19	distal tail protein Dit	tail
UniRef90	UHGV-0140404_49	UniRef90_A0A3E3AF06	256.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0140404_49	908340.HMPREF9406_2569	488.0	0	phage tail	N/A
NCBIFam	UHGV-0140404_49	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0140404_49	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0140404_49	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_50	phrog_1067	344.8	0	minor head protein	head and packaging
UniRef90	UHGV-0140404_50	UniRef90_G1VMN5	1268.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_50	908340.HMPREF9406_2568	1265.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0140404_50	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0140404_50	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0140404_50	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0140404_50	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0140404_51	UniRef90_UPI001E4F503F	79.0	0.0000000000000654	collagen-like protein	N/A
eggNOG-mapper	UHGV-0140404_51	908340.HMPREF9406_2567	414.0	0	N/A	N/A
PHROG	UHGV-0140404_52	phrog_4492	124.0	1.2e-36	tail fiber protein	tail
UniRef90	UHGV-0140404_52	UniRef90_A0A0M2NIZ4	84.3	0.0000000000000317	Microcystin dependent protein	N/A
eggNOG-mapper	UHGV-0140404_52	908340.HMPREF9406_2566	617.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0140404_52	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0140404_53	phrog_24451	187.4	0	N/A	unknown function
UniRef90	UHGV-0140404_53	UniRef90_A0A3P6KYQ0	84.7	9.03e-19	N/A	N/A
eggNOG-mapper	UHGV-0140404_53	908340.HMPREF9406_2565	213.0	0	N/A	N/A
Pfam	UHGV-0140404_54	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0140404_54	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0140404_55	phrog_1129	78.1	7.4e-23	holin	lysis
UniRef90	UHGV-0140404_55	UniRef90_A0A099I905	175.0	0	Holin	N/A
eggNOG-mapper	UHGV-0140404_55	552396.HMPREF0863_01649	124.0	3.88e-36	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0140404_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0140404_55	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0140404_57	UniRef90_A0A318KDR1	265.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0140404_57	742740.HMPREF9474_01683	117.0	2.51e-27	Glycosyl hydrolases family 25	N/A
COG	UHGV-0140404_57	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-0140404_58	K18843	77.4	2.6e-22	hicB; antitoxin HicB	N/A
PHROG	UHGV-0140404_58	phrog_497	88.1	1.5e-25	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0140404_58	UniRef90_G1VMP2	276.0	0	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0140404_58	908340.HMPREF9406_2561	274.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-0140404_58	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0140404_58	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0140404_58	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_59	K07339	64.2	1.9e-18	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0140404_59	phrog_353	88.9	2.9e-26	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0140404_59	UniRef90_D0GMY5	99.4	3.59e-26	Toxin-antitoxin system, toxin component, HicA family	N/A
eggNOG-mapper	UHGV-0140404_59	908340.HMPREF9406_2560	138.0	2.29953e-42	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0140404_59	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0140404_59	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0140404_59	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0140404_60	K19117	51.5	3.4e-16	csd1, cas8c; CRISPR-associated protein Csd1	N/A
eggNOG-mapper	UHGV-0140404_60	999413.HMPREF1094_00546	64.7	0.0000000474	CRISPR-associated protein (Cas_Csd1)	N/A
PADLOC	UHGV-0140404_60	pfam09709	46.5	1.8e-18	CAS-I-C; effector_LS	CRISPR-CAS
COG	UHGV-0140404_60	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-0140404_61	phrog_25567	161.3	0	N/A	unknown function
Pfam	UHGV-0140404_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
AcrCatalog	UHGV-0140404_63	cluster_11486	168.0	0	NA	N/A
eggNOG-mapper	UHGV-0140404_64	999413.HMPREF1094_00643	186.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0140404	Yes	36,797	41	94	1
UHGV-0137780	No	42,811	41	100	1
UHGV-2005909	No	27,268	42	70	1
UHGV-1974600	No	22,878	44	59	1
UHGV-0387798	No	18,642	43	48	1
UHGV-2023133	No	10,271	41	26	1