vOTU vOTU-015461

vOTU: vOTU-015461

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-015461
Number of genomes	21
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00120 → vSUBFAM-07396 → vOTU-015461
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0056467
Biosample ID	N/A
Genome length (bp)	119,692 bps
CheckV completeness	79.39% (Medium-quality)
CDS count	135
CDS density	92.30%
tRNA count	8
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0056467_4	PF19266,TIGR01611,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_5	phrog_7145	49.2	0.000000000000053	baseplate wedge subunit	tail
structural_annotation	UHGV-0056467_6	PF21683,COG3500	N/A	N/A	N/A	N/A
Pfam	UHGV-0056467_7	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
KOfam	UHGV-0056467_8	K19303	41.8	0.000000000014	mepH; murein DD-endopeptidase [EC:3.4.-.-]	N/A
eggNOG-mapper	UHGV-0056467_8	411473.RUMCAL_00346	133.0	5.77e-33	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0056467_8	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0056467_8	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
PHROG	UHGV-0056467_9	phrog_9570	68.5	7.5e-20	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0056467_9	411473.RUMCAL_00345	334.0	0	NLP P60 protein	N/A
Pfam	UHGV-0056467_9	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0056467_9	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0056467_11	PF04965,TIGR03357,COG3628	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_12	335543.Sfum_3832	63.5	0.000000109	homolog of phage Mu protein gp47	N/A
COG	UHGV-0056467_12	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_12	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056467_14	UniRef90_U2M6A1	437.0	0	Phage tail protein	N/A
Pfam	UHGV-0056467_14	PF09684	N/A	N/A	Phage tail protein (Tail_P2_I)	Tail_P2_I
structural_annotation	UHGV-0056467_14	PF09684,TIGR02242,COG4385	N/A	N/A	N/A	N/A
Pfam	UHGV-0056467_16	PF00404	N/A	N/A	Dockerin type I domain	Dockerin_1
PHROG	UHGV-0056467_18	phrog_207	87.9	7.3e-26	head maturation protease	head and packaging
eggNOG-mapper	UHGV-0056467_18	444878.E3SR09_9CAUD	59.7	0.000000207	Pfam:Peptidase_S77	N/A
Pfam	UHGV-0056467_18	PF03420	N/A	N/A	Prohead core protein serine protease	Peptidase_S77
structural_annotation	UHGV-0056467_18	PF03420,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_19	phrog_138	44.6	0.0000000000012	major head protein	head and packaging
structural_annotation	UHGV-0056467_19	PF07068,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_21	phrog_3339	313.5	0	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_21	UniRef90_A0A7T3N2D0	211.0	0	Putative homing endonuclease	N/A
eggNOG-mapper	UHGV-0056467_21	1006972.H6SU53_9CAUD	204.0	0	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-0056467_21	PF04480,PF12568,MF_00824,NF007025,NF007294,COG3818,COG3727	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_23	phrog_211	42.7	0.0000000000036	head-tail adaptor Ad2	connector
structural_annotation	UHGV-0056467_23	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_25	phrog_3636	48.7	0.000000000000051	DNA binding protein	DNA, RNA and nucleotide metabolism
COG	UHGV-0056467_25	COG0783	N/A	N/A	DNA-binding ferritin-like protein (oxidative damage protectant)	N/A
structural_annotation	UHGV-0056467_25	PF00210,MF_01441,NF006975,COG0783	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_26	phrog_20259	86.8	2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0056467_26	1211640.K4K5Z9_9CAUD	67.0	0.00000000000928	N/A	N/A
Pfam	UHGV-0056467_26	PF19474	N/A	N/A	N/A	DUF6011
structural_annotation	UHGV-0056467_26	PF19474	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_29	PF11031,MF_04104,NF041673,COG2203	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_30	K01449	59.1	9.6e-17	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
Pfam	UHGV-0056467_30	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0056467_30	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0056467_30	TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_31	K14440	254.6	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0056467_31	phrog_62	296.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_31	UniRef90_U2KY82	718.0	0	Protein, SNF2 family	N/A
eggNOG-mapper	UHGV-0056467_31	411473.RUMCAL_00324	718.0	0	SNF2 family	N/A
PADLOC	UHGV-0056467_31	ZorD1_00007	144.0	0	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0056467_31	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0056467_31	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0056467_31	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0056467_31	PF00176,PF00271,PF07443,MF_01821,NF041790,TIGR01158,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_35	phrog_843	56.8	3.4e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_35	UniRef90_U2MD58	195.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0056467_35	871584.D9ZNH9_9CAUD	70.5	0.000000000000377	Recombination protein U	N/A
Pfam	UHGV-0056467_35	PF03838	N/A	N/A	Recombination protein U	RecU
structural_annotation	UHGV-0056467_35	PF03838,MF_00130,NF002582,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_38	phrog_1129	68.4	7.6e-20	holin	lysis
UniRef90	UHGV-0056467_38	UniRef90_A0A0D8J2M2	120.0	6.91e-34	Enolase	N/A
eggNOG-mapper	UHGV-0056467_38	665956.HMPREF1032_03272	118.0	1.31e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0056467_38	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0056467_38	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_39	phrog_1221	165.7	0	N/A	unknown function
UniRef90	UHGV-0056467_39	UniRef90_A0A843GH20	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056467_39	748224.HMPREF9436_03374	151.0	5.49996e-41	N/A	N/A
Pfam	UHGV-0056467_39	PF06067	N/A	N/A	N/A	DUF932
NCBIFam	UHGV-0056467_39	TIGR03299.1	N/A	N/A	phage/plasmid-like protein TIGR03299	N/A
structural_annotation	UHGV-0056467_39	PF06067,TIGR03299	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_40	K03698	50.2	0.000000000000043	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0056467_40	phrog_28876	108.1	6.7e-32	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0056467_40	UniRef90_A0A8J6IP18	134.0	8.26e-36	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_40	411473.RUMCAL_00307	190.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
Pfam	UHGV-0056467_40	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-0056467_40	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0056467_40	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_47	K03657	274.9	0	uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]	N/A
PHROG	UHGV-0056467_47	phrog_1967	246.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_47	UniRef90_U2KYN9	352.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0056467_47	411473.RUMCAL_00297	352.0	0	ATP-dependent DNA helicase	N/A
PADLOC	UHGV-0056467_47	drt-cluster22	145.9	0	DRT	DRT
Pfam	UHGV-0056467_47	PF00580	N/A	N/A	UvrD/REP helicase N-terminal domain	UvrD-helicase
Pfam	UHGV-0056467_47	PF13361	N/A	N/A	UvrD-like helicase C-terminal domain	UvrD_C
COG	UHGV-0056467_47	COG0210	N/A	N/A	Superfamily I DNA or RNA helicase	N/A
structural_annotation	UHGV-0056467_47	PF01443,MF_01920,TIGR01073,COG0210	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_49	K19171	86.4	1.3e-26	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0056467_49	phrog_77	94.1	1.4e-29	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_49	UniRef90_U2M633	328.0	0	Putative DNA sulfur modification protein DndD	N/A
Pfam	UHGV-0056467_49	PF02463	N/A	N/A	RecF/RecN/SMC N terminal domain	SMC_N
COG	UHGV-0056467_49	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0056467_49	PF13166,MF_00449,NF002244,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_51	phrog_5931	108.9	5.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-0056467_51	882082.SaccyDRAFT_4646	85.1	1.98e-17	N/A	N/A
Pfam	UHGV-0056467_51	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
KOfam	UHGV-0056467_52	K01972	291.7	0	E6.5.1.2, ligA, ligB; DNA ligase (NAD+) [EC:6.5.1.2]	N/A
PHROG	UHGV-0056467_52	phrog_3869	359.0	0	NAD-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_52	UniRef90_A0A2M9WUQ3	248.0	0	DNA ligase (NAD(+))	N/A
eggNOG-mapper	UHGV-0056467_52	1201290.M902_1538	199.0	0	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	N/A
Pfam	UHGV-0056467_52	PF01653	N/A	N/A	NAD-dependent DNA ligase adenylation domain	DNA_ligase_aden
Pfam	UHGV-0056467_52	PF03120	N/A	N/A	NAD-dependent DNA ligase OB-fold domain	DNA_ligase_OB
COG	UHGV-0056467_52	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0056467_52	PF01653,PF03120,PF00533,MF_01588,NF005932,COG0272	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_53	K03465	110.1	1.4e-32	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0056467_53	phrog_85	60.2	6.7e-22	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_53	UniRef90_A0A8F0WBL8	180.0	0	Thymidylate synthase, flavin-dependent	N/A
eggNOG-mapper	UHGV-0056467_53	888832.HMPREF9420_0157	130.0	2.56e-33	thymidylate synthase (FAD) activity	N/A
Pfam	UHGV-0056467_53	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
COG	UHGV-0056467_53	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0056467_53	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_54	PF09643,NF000331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_55	PF13780	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056467_56	UniRef90_A0A3D6B2G4	219.0	0	Mtd_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_56	411470.RUMGNA_00120	62.4	0.0000001	N/A	N/A
structural_annotation	UHGV-0056467_57	PF20010	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_58	phrog_23820	44.4	0.0000000000037	tail fiber protein	tail
eggNOG-mapper	UHGV-0056467_58	768710.DesyoDRAFT_1133	83.2	0.0000000000000295	tail collar domain protein	N/A
COG	UHGV-0056467_58	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0056467_62	phrog_697	61.4	5.3e-18	structural protein	head and packaging
UniRef90	UHGV-0056467_62	UniRef90_A0A6C0CJK8	55.5	0.0000000527	Mtd_N domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0056467_62	382359.Q0QZC0_BPSYS	67.8	0.00000000000641	N/A	N/A
Pfam	UHGV-0056467_62	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
KOfam	UHGV-0056467_64	K19303	44.0	0.0000000000029	mepH; murein DD-endopeptidase [EC:3.4.-.-]	N/A
PHROG	UHGV-0056467_64	phrog_1493	65.2	1.5e-34	endolysin	lysis
UniRef90	UHGV-0056467_64	UniRef90_A0A2V2DH14	254.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_64	441769.ABFU01000033_gene39	104.0	1.23e-22	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0056467_64	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0056467_64	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0056467_64	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0056467_64	PF00877,PF01471,PF18342,NF033742,TIGR02869,NF033202,COG4991,COG3409,COG0791	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_67	K09125	109.0	5.6e-32	yhhQ; queuosine precursor transporter	N/A
PHROG	UHGV-0056467_67	phrog_4899	43.5	0.0000000000053	N/A	unknown function
UniRef90	UHGV-0056467_67	UniRef90_UPI000E3E4EB9	286.0	0	VUT family protein	N/A
eggNOG-mapper	UHGV-0056467_67	1392487.JIAD01000001_gene770	283.0	0	Putative vitamin uptake transporter	N/A
Pfam	UHGV-0056467_67	PF02592	N/A	N/A	Putative vitamin uptake transporter	Vut_1
COG	UHGV-0056467_67	COG1738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_67	PF02592,MF_02088,TIGR00697,COG1738	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_68	K00059	107.6	9.3e-32	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	N/A
PHROG	UHGV-0056467_68	phrog_3142	58.8	1.8e-17	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0056467_68	UniRef90_A0A174HFL0	257.0	0	3-oxoacyl-[acyl-carrier-protein] reductase FabG	N/A
eggNOG-mapper	UHGV-0056467_68	1121115.AXVN01000079_gene2742	258.0	0	Enoyl-(Acyl carrier protein) reductase	N/A
Pfam	UHGV-0056467_68	PF13561	N/A	N/A	Enoyl-(Acyl carrier protein) reductase	adh_short_C2
COG	UHGV-0056467_68	COG1028	N/A	N/A	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	N/A
structural_annotation	UHGV-0056467_68	PF13561,MF_01647,NF005474,COG1028	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_69	K11991	117.4	1.7e-34	tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]	N/A
PHROG	UHGV-0056467_69	phrog_174	56.6	2.8e-17	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_69	UniRef90_A0A1G5E0F2	188.0	0	tRNA(Arg) A34 adenosine deaminase TadA	N/A
eggNOG-mapper	UHGV-0056467_69	158190.SpiGrapes_0666	175.0	0	tRNA wobble adenosine to inosine editing	N/A
Pfam	UHGV-0056467_69	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-0056467_69	COG0590	N/A	N/A	tRNA(Arg) A34 adenosine deaminase TadA	N/A
structural_annotation	UHGV-0056467_69	PF14437,MF_00972,NF008113,COG0590	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_71	phrog_8113	40.2	0.000000000048	N/A	unknown function
UniRef90	UHGV-0056467_71	UniRef90_U2M6G8	137.0	4.59e-39	KTSC domain-containing protein	N/A
Pfam	UHGV-0056467_71	PF13619	N/A	N/A	KTSC domain	KTSC
PHROG	UHGV-0056467_73	phrog_1221	94.6	1e-27	N/A	unknown function
UniRef90	UHGV-0056467_73	UniRef90_UPI001E2D938E	76.3	0.00000000000495	N/A	N/A
eggNOG-mapper	UHGV-0056467_73	97139.C824_05805	99.4	3.97e-21	N/A	N/A
Pfam	UHGV-0056467_73	PF06067	N/A	N/A	N/A	DUF932
structural_annotation	UHGV-0056467_73	PF06067,TIGR03299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_75	MF_00962,NF005644,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_77	411473.RUMCAL_00394	310.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056467_78	1341157.RF007C_02465	155.0	5.10073e-43	N/A	N/A
structural_annotation	UHGV-0056467_78	PF01695,MF_00377,NF038214,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_79	K02314	87.4	1.6e-25	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0056467_79	phrog_19	135.1	5.9e-40	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_79	UniRef90_U2KYX7	572.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_79	411473.RUMCAL_00392	572.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0056467_79	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0056467_79	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0056467_79	PF03796,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_80	K03469	171.9	0	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0056467_80	phrog_531	159.9	0	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_80	UniRef90_A0A7C6BQ30	185.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0056467_80	509191.AEDB02000082_gene2545	169.0	0	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0056467_80	PF00075	N/A	N/A	RNase H	RNase_H
NCBIFam	UHGV-0056467_80	NF001236.0	N/A	N/A	ribonuclease HI	N/A
COG	UHGV-0056467_80	COG0328	N/A	N/A	Ribonuclease HI	N/A
HAMAP	UHGV-0056467_80	MF_00042	N/A	N/A	Ribonuclease H [rnhA]	N/A
structural_annotation	UHGV-0056467_80	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_81	K02316	104.9	8.4e-31	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0056467_81	phrog_47	136.3	3.09999e-40	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_81	UniRef90_U2M6E9	409.0	0	Toprim domain protein	N/A
eggNOG-mapper	UHGV-0056467_81	411473.RUMCAL_00391	409.0	0	Toprim-like	N/A
PADLOC	UHGV-0056467_81	drt-cluster192	48.3	0.000000000000012	DRT	DRT
Pfam	UHGV-0056467_81	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-0056467_81	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0056467_81	PF13155,PF01807,PF08275,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_82	NF006147	N/A	N/A	N/A	N/A
Pfam	UHGV-0056467_83	PF01242	N/A	N/A	6-pyruvoyl tetrahydropterin synthase	PTPS
COG	UHGV-0056467_83	COG0720	N/A	N/A	6-pyruvoyl-tetrahydropterin synthase	N/A
structural_annotation	UHGV-0056467_83	PF01242,MF_01527_B,TIGR03112,COG0720	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_84	phrog_14578	68.7	9.3e-20	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0056467_84	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_85	K02335	151.9	5.60519e-45	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0056467_85	phrog_12241	170.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_85	UniRef90_U2KFK5	501.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-0056467_85	411473.RUMCAL_00388	501.0	0	3-5 exonuclease	N/A
Pfam	UHGV-0056467_85	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-0056467_85	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0056467_85	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0056467_85	PF01612,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_86	phrog_3339	342.2	0	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_86	UniRef90_A0A5S9HY64	243.0	0	Putative Hef-like homing endonuclease	N/A
eggNOG-mapper	UHGV-0056467_86	722417.D5GV46_9CAUD	194.0	0	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-0056467_86	PF04480,PF12568,MF_00824,NF007025,NF007294,COG3818,COG3727	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_87	K02335	122.1	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0056467_87	phrog_17	161.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_87	UniRef90_U2KYX3	493.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0056467_87	411473.RUMCAL_00387	493.0	0	intein-mediated protein splicing	N/A
Pfam	UHGV-0056467_87	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0056467_87	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0056467_88	PF00712,PF02768,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_89	phrog_1706	114.2	1.3e-33	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0056467_89	871584.D9ZNH8_9CAUD	95.5	1.21e-20	nuclease activity	N/A
PADLOC	UHGV-0056467_89	COG1468	40.2	0.000000000095	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; acquisition_associated	CRISPR-CAS
structural_annotation	UHGV-0056467_89	PF10926,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_90	K02343	220.6	0	dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]	N/A
PHROG	UHGV-0056467_90	phrog_5846	141.2	0	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_90	UniRef90_UPI0016882862	160.0	4.35e-37	DNA polymerase III subunit gamma/tau	N/A
eggNOG-mapper	UHGV-0056467_90	411473.RUMCAL_00384	317.0	0	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	N/A
Pfam	UHGV-0056467_90	PF07591	N/A	N/A	Pretoxin HINT domain	PT-HINT
Pfam	UHGV-0056467_90	PF13177	N/A	N/A	DNA polymerase III, delta subunit	DNA_pol3_delta2
NCBIFam	UHGV-0056467_90	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
COG	UHGV-0056467_90	COG2812	N/A	N/A	DNA polymerase III, gamma/tau subunits	N/A
structural_annotation	UHGV-0056467_90	PF05203,PF13177,PF12169,PF17864,MF_01509,MF_01420,NF004046,NF005852,COG2812,COG1372	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_92	K03553	124.7	2.60642e-43	recA; recombination protein RecA	N/A
PHROG	UHGV-0056467_92	phrog_97	176.7	0	UvsX-like recombinase	other
UniRef90	UHGV-0056467_92	UniRef90_U2KYW9	533.0	0	Protein RecA	N/A
eggNOG-mapper	UHGV-0056467_92	411473.RUMCAL_00382	533.0	0	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-0056467_92	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-0056467_92	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0056467_92	PF00154,MF_00268,TIGR02012,COG0468	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_93	397290.C810_05204	55.8	0.0000000634	N/A	N/A
PHROG	UHGV-0056467_94	phrog_2002	50.5	0.000000000000027	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0056467_94	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_95	phrog_20214	42.1	0.0000000000082	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0056467_95	PF12169,PF06144,MF_01508,NF006301,COG2812	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_96	K02341	60.8	1.5e-17	holB; DNA polymerase III subunit delta' [EC:2.7.7.7]	N/A
PHROG	UHGV-0056467_96	phrog_5846	82.6	4.7e-24	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_96	UniRef90_U2KFJ7	165.0	0	DNA polymerase III, delta' subunit domain protein	N/A
eggNOG-mapper	UHGV-0056467_96	1033737.CAEV01000043_gene1475	54.7	0.0000075	DNA polymerase III	N/A
Pfam	UHGV-0056467_96	PF13177	N/A	N/A	DNA polymerase III, delta subunit	DNA_pol3_delta2
COG	UHGV-0056467_96	COG0470	N/A	N/A	DNA polymerase III, delta prime subunit	N/A
structural_annotation	UHGV-0056467_96	PF13177,MF_04162,NF004047,COG2812	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_97	phrog_887	127.1	1.4e-37	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0056467_97	UniRef90_E7DN71	191.0	0	Queuosine tRNA-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0056467_97	59241.E7DN71_BPDP1	191.0	0	tRNA modification	N/A
structural_annotation	UHGV-0056467_97	PF00290,MF_01634,TIGR00432,COG0343	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_99	phrog_18716	146.6	3.36312e-44	N/A	unknown function
UniRef90	UHGV-0056467_99	UniRef90_A0A7X7HJW5	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056467_99	1029718.SFBM_0379	120.0	1.43e-32	N/A	N/A
Pfam	UHGV-0056467_99	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0056467_99	PF18909	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_101	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_104	PF19380	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056467_107	UniRef90_U2M6C5	539.0	0	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_107	411473.RUMCAL_00366	539.0	0	N/A	N/A
structural_annotation	UHGV-0056467_107	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_108	411473.RUMCAL_00365	281.0	0	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	N/A
Pfam	UHGV-0056467_108	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0056467_108	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0056467_108	PF00533,PF01653,MF_01588,TIGR00575,COG0272	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_109	phrog_213	47.0	0.00000000000003	portal protein	head and packaging
UniRef90	UHGV-0056467_109	UniRef90_A0A843GQG5	155.0	5.25e-38	Portal protein	N/A
Pfam	UHGV-0056467_109	PF07230	N/A	N/A	Bacteriophage T4-like portal protein (Gp20)	Portal_Gp20
structural_annotation	UHGV-0056467_109	PF07230,MF_04135,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_112	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056467_113	PF16724,TIGR01633,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_115	phrog_23	77.0	1.7e-22	tail sheath	tail
eggNOG-mapper	UHGV-0056467_115	1121406.JAEX01000043_gene718	63.2	0.0000000678	Phage tail sheath C-terminal domain	N/A
COG	UHGV-0056467_115	COG3497	N/A	N/A	Phage tail sheath protein FI	N/A
structural_annotation	UHGV-0056467_115	PF17541,PF17481,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_116	phrog_3339	322.0	0	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056467_116	UniRef90_A0A5S9HY64	213.0	0	Putative Hef-like homing endonuclease	N/A
eggNOG-mapper	UHGV-0056467_116	1110702.G8GIT2_9CAUD	164.0	1.27e-41	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-0056467_116	PF04480,PF12568,MF_02018,NF000358,NF007294,COG3818,COG3727	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_117	1304866.K413DRAFT_4695	53.1	0.0000000203	N/A	N/A
structural_annotation	UHGV-0056467_118	PF13392	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056467_121	357276.EL88_11485	83.6	3.39e-19	N/A	N/A
PHROG	UHGV-0056467_122	phrog_24386	237.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0056467_122	742740.HMPREF9474_02291	199.0	0	phosphatase activity	N/A
COG	UHGV-0056467_122	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
UniRef90	UHGV-0056467_125	UniRef90_A0A7X7NW54	64.7	0.000000564	InlB B-repeat-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0056467_125	1227349.C170_16385	62.4	0.000000688	dextransucrase activity	N/A
Pfam	UHGV-0056467_125	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-0056467_125	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
COG	UHGV-0056467_125	COG1934	N/A	N/A	Lipopolysaccharide export system protein LptA	N/A
PHROG	UHGV-0056467_126	phrog_3339	209.5	0	homing endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0056467_126	1006972.H6SU53_9CAUD	150.0	5.15e-37	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-0056467_126	PF04480,PF12568,MF_00824,NF007025,NF007294,COG3818,COG3727	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_128	phrog_3339	239.7	0	homing endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0056467_128	722417.D5GV46_9CAUD	159.0	3.13e-39	regulation of transcription, DNA-dependent	N/A
structural_annotation	UHGV-0056467_128	PF04480,PF12568,MF_02018,NF000358,NF007294,COG3818,COG3727	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_130	K06283	81.1	8.4e-24	spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D	N/A
PHROG	UHGV-0056467_130	phrog_11726	59.2	6.4e-17	sporulation stage III protein D	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0056467_130	UniRef90_A0A3E3E0H5	76.3	2.16e-16	Stage III sporulation protein D	N/A
eggNOG-mapper	UHGV-0056467_130	445971.ANASTE_00740	76.3	3.82e-17	sporulation transcriptional regulator SpoIIID	N/A
Pfam	UHGV-0056467_130	PF12116	N/A	N/A	Stage III sporulation protein D	SpoIIID
COG	UHGV-0056467_130	COG1609	N/A	N/A	DNA-binding transcriptional regulator, LacI/PurR family	N/A
structural_annotation	UHGV-0056467_130	PF12116,TIGR02844	N/A	N/A	N/A	N/A
PHROG	UHGV-0056467_131	phrog_1238	56.6	4.1e-16	phosphoheptose isomerase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0056467_131	484770.UFO1_3918	136.0	5.92e-40	UMP catabolic process	N/A
COG	UHGV-0056467_131	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
structural_annotation	UHGV-0056467_131	PF08645,TIGR01689,COG0241	N/A	N/A	N/A	N/A
KOfam	UHGV-0056467_133	K07341	64.9	2.2e-18	doc; death on curing protein	N/A
PHROG	UHGV-0056467_133	phrog_577	59.1	5.4e-17	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0056467_133	UniRef90_A0A1F7QQC4	58.2	0.0000000179	Fido domain-containing protein	N/A
eggNOG-mapper	UHGV-0056467_133	1288963.ADIS_1580	51.6	0.000000953	Fic/DOC family	N/A
Pfam	UHGV-0056467_133	PF02661	N/A	N/A	Fic/DOC family	Fic
NCBIFam	UHGV-0056467_133	TIGR01550.1	N/A	N/A	type II toxin-antitoxin system death-on-curing family toxin	N/A
COG	UHGV-0056467_133	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
structural_annotation	UHGV-0056467_134	PF12322,COG4518	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0056467	Yes	119,692	35	79	1
UHGV-1499458	No	119,692	35	79	1
UHGV-1480477	No	119,330	35	79	1
UHGV-1481805	No	119,326	35	79	1
UHGV-1399566	No	85,695	35	57	1
UHGV-1787025	No	38,239	34	25	1
UHGV-1634706	No	34,879	35	23	1
UHGV-1642547	No	34,035	35	23	1
UHGV-1762406	No	29,835	34	20	1
UHGV-1592143	No	29,383	34	20	1
UHGV-1681567	No	29,192	35	19	1
UHGV-1614859	No	26,020	35	17	1
UHGV-1733128	No	21,394	35	14	1
UHGV-0050097	No	19,610	35	13	1
UHGV-1782294	No	19,610	35	13	1
UHGV-1689217	No	18,773	34	13	1
UHGV-1642915	No	16,357	34	11	1
UHGV-1644890	No	14,369	36	9	1
UHGV-1621565	No	13,087	34	9	1
UHGV-1805992	No	12,824	34	8	1
UHGV-1803860	No	12,765	34	8	1