vOTU vOTU-016600

vOTU: vOTU-016600

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-016600
Number of genomes	13
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00979 → vGENUS-10951 → vOTU-016600
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1428093
Biosample ID	SAMEA2151677
Genome length (bp)	33,050 bps
CheckV completeness	83.48% (Medium-quality)
CDS count	57
CDS density	90.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335	Total connections	112	Host agreement	86.61
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 83.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1428093_2	phrog_34	49.5	0.000000000000094	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428093_2	UniRef90_A0A151B7Z2	121.0	2.92e-33	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1428093_2	525919.Apre_0813	105.0	1.19e-27	Endodeoxyribonuclease RusA	N/A
COG	UHGV-1428093_2	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1428093_2	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_4	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_6	phrog_111	147.6	5.88545e-44	DNA methyltransferase	other
UniRef90	UHGV-1428093_6	UniRef90_A0A1G8EL36	181.0	0	Site-specific DNA-methyltransferase (Adenine-specific)	N/A
eggNOG-mapper	UHGV-1428093_6	1567011.A0A0A7RUD1_9VIRU	176.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-1428093_6	oMTase_00015	187.3	0	orphan methyltransferase	RM
Pfam	UHGV-1428093_6	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1428093_6	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_8	PF09871,TIGR00739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_12	PF14001,MF_01194,TIGR03318,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_14	phrog_36	57.6	2.8e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1428093_14	1121871.AUAT01000030_gene1019	52.4	0.00000157	N/A	N/A
COG	UHGV-1428093_14	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1428093_14	PF07374,NF008895	N/A	N/A	N/A	N/A
KOfam	UHGV-1428093_19	K07474	141.2	1.19993e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1428093_19	phrog_51	150.8	5.60519e-45	terminase small subunit	head and packaging
UniRef90	UHGV-1428093_19	UniRef90_R7ITW3	325.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1428093_19	469618.FVAG_01302	154.0	2.8026e-45	Terminase small subunit	N/A
Pfam	UHGV-1428093_19	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1428093_19	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1428093_19	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_20	phrog_8148	113.9	5.1e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1428093_20	UniRef90_R7ITS8	135.0	3.01999e-40	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1428093_20	469618.FVAG_00794	82.4	1.39e-17	TIGRFAM Phage	N/A
COG	UHGV-1428093_20	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_21	phrog_30251	455.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1428093_21	UniRef90_R7ITA5	760.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1428093_21	546275.FUSPEROL_02030	463.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1428093_21	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1428093_21	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_22	phrog_64	229.9	0	portal protein	head and packaging
UniRef90	UHGV-1428093_22	UniRef90_R7IUE9	872.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1428093_22	665956.HMPREF1032_03614	242.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1428093_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1428093_22	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_23	phrog_4502	99.9	3.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1428093_23	268407.PWYN_12400	110.0	2.79e-30	N/A	N/A
structural_annotation	UHGV-1428093_23	PF14083	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428093_25	UniRef90_R7IWF4	280.0	0	SPP1 gp7 family phage putative head morphogenesis protein	N/A
eggNOG-mapper	UHGV-1428093_25	665956.HMPREF1032_03615	59.3	0.0000002	cell adhesion	N/A
COG	UHGV-1428093_25	COG2369	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1428093_27	cluster_73853	37.4	0.000000106	NA	N/A
PHROG	UHGV-1428093_28	phrog_172	75.5	9.1e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-1428093_28	UniRef90_A0A3D1PKZ2	67.8	0.0000000000932	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1428093_28	908339.HMPREF9265_0944	54.7	0.00000143	N/A	N/A
Pfam	UHGV-1428093_28	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1428093_28	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_29	phrog_247	283.6	0	major head protein	head and packaging
UniRef90	UHGV-1428093_29	UniRef90_R7ITV5	728.0	0	Putative prophage Lp2 protein 40	N/A
eggNOG-mapper	UHGV-1428093_29	445335.CBN_1379	307.0	0	N/A	N/A
COG	UHGV-1428093_29	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-1428093_29	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428093_30	445972.ANACOL_01847	48.9	0.00000515	N/A	N/A
structural_annotation	UHGV-1428093_30	PF05135,TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428093_31	445972.ANACOL_01848	55.1	0.0000000422	N/A	N/A
structural_annotation	UHGV-1428093_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428093_32	665956.HMPREF1032_03623	52.0	0.00000752	N/A	N/A
structural_annotation	UHGV-1428093_32	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_33	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1428093_34	445972.ANACOL_01851	85.9	3.13e-19	N/A	N/A
structural_annotation	UHGV-1428093_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_35	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_36	phrog_26308	75.8	5.7e-22	N/A	unknown function
UniRef90	UHGV-1428093_36	UniRef90_A0A1Q6JN93	111.0	9.36e-27	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1428093_36	1042156.CXIVA_15870	99.4	4.64e-22	sh3 domain protein	N/A
COG	UHGV-1428093_36	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_36	PF11355,PF13828,MF_00791,TIGR02588,COG5633	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_40	phrog_7940	139.7	1.70006e-41	N/A	unknown function
UniRef90	UHGV-1428093_40	UniRef90_A0A7G6E7X2	211.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1428093_40	1449126.JQKL01000006_gene832	211.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1428093_40	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1428093_40	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1428093_40	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_41	phrog_1535	126.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1428093_41	1232449.BAHV02000010_gene2723	87.0	0.0000000000000238	domain protein	N/A
COG	UHGV-1428093_41	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_41	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_42	phrog_1194	67.7	1.5e-19	N/A	unknown function
structural_annotation	UHGV-1428093_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_43	phrog_13879	84.5	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1428093_43	1122919.KB905559_gene1344	73.2	0.0000000000987	N/A	N/A
structural_annotation	UHGV-1428093_43	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428093_45	UniRef90_A0A3G1KS68	75.9	0.00000000000162	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-1428093_45	509191.AEDB02000102_gene3725	72.8	0.0000000000149	RHS repeat-associated core domain	N/A
Pfam	UHGV-1428093_45	PF07591	N/A	N/A	Pretoxin HINT domain	PT-HINT
NCBIFam	UHGV-1428093_45	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-1428093_45	COG1372	N/A	N/A	Intein/homing endonuclease	N/A
KOfam	UHGV-1428093_48	K24340	40.0	0.000000000012	COL19A; collagen type XIX alpha	N/A
PHROG	UHGV-1428093_48	phrog_5073	55.2	2e-27	tail fiber protein	tail
UniRef90	UHGV-1428093_48	UniRef90_A0A174NC72	66.2	0.000000183	BppU_N domain-containing protein	N/A
PHROG	UHGV-1428093_49	phrog_2310	47.9	0.00000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1428093_49	632245.CLP_2682	47.8	0.00000163	N/A	N/A
PHROG	UHGV-1428093_50	phrog_689	59.2	6.3e-17	holin	lysis
UniRef90	UHGV-1428093_50	UniRef90_UPI0004512484	72.8	0.00000000000000303	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-1428093_50	1230342.CTM_14513	72.8	5.09e-16	Haemolysin XhlA	N/A
Pfam	UHGV-1428093_50	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
UniRef90	UHGV-1428093_51	UniRef90_A0A1Q6LC62	349.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-1428093_51	411461.DORFOR_01937	73.2	0.0000000000588	Papain-like cysteine protease AvrRpt2	N/A
Pfam	UHGV-1428093_51	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
Pfam	UHGV-1428093_51	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1428093_51	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1428093_51	PF03412,PF08239,NF040678,COG3807,COG3271	N/A	N/A	N/A	N/A
PHROG	UHGV-1428093_52	phrog_2329	62.6	5.2e-18	N/A	unknown function
KOfam	UHGV-1428093_54	K07063	88.1	1.3e-25	N/A	N/A
UniRef90	UHGV-1428093_54	UniRef90_A0A3D1PJK3	102.0	8.19e-25	Putative toxin-antitoxin system toxin component, PIN family	N/A
eggNOG-mapper	UHGV-1428093_54	635013.TherJR_0915	69.3	0.000000000000953	PIN domain	N/A
Pfam	UHGV-1428093_54	PF13470	N/A	N/A	PIN domain	PIN_3
NCBIFam	UHGV-1428093_54	TIGR00305.1	N/A	N/A	putative toxin-antitoxin system toxin component, PIN family	N/A
COG	UHGV-1428093_54	COG1569	N/A	N/A	Predicted nucleic acid-binding protein, contains PIN domain	N/A
structural_annotation	UHGV-1428093_54	PF13470,MF_00265,TIGR00305,COG1569	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428093_55	PF02583,COG1937	N/A	N/A	N/A	N/A
KOfam	UHGV-1428093_56	K22299	43.6	0.0000000000066	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1428093_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1428093_56	COG0662	N/A	N/A	Mannose-6-phosphate isomerase, cupin superfamily	N/A
structural_annotation	UHGV-1428093_56	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1428093_57	K19449	63.3	4e-18	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-1428093_57	phrog_8	50.4	0.000000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-1428093_57	UniRef90_R5YVI1	143.0	2.20985e-42	HTH-type transcriptional regulator SinR	N/A
eggNOG-mapper	UHGV-1428093_57	1034347.CAHJ01000062_gene1015	59.7	0.000000000658	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1428093_57	retron_type_VI_hth_cluster2_1	50.3	0.000000000000069	N/A	Retron
Pfam	UHGV-1428093_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1428093_57	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-1428093_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1428093_57	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1428093	Yes	33,050	28	83	1
UHGV-0094969	No	28,735	28	73	1
UHGV-0048220	No	24,566	28	62	1
UHGV-1450074	No	24,566	28	62	1
UHGV-1383447	No	22,023	28	56	1
UHGV-0191759	No	15,656	28	40	1
UHGV-1768436	No	15,399	28	39	1
UHGV-1333682	No	14,882	28	38	1
UHGV-1738119	No	14,882	28	38	1
UHGV-1617546	No	13,210	28	33	1
UHGV-1801086	No	13,019	28	33	1
UHGV-0108419	No	11,521	28	29	1
UHGV-1588839	No	11,521	28	29	1