vOTU vOTU-017040

vOTU: vOTU-017040

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017040
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01096 → vGENUS-01032 → vOTU-017040
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0066102
Biosample ID	N/A
Genome length (bp)	29,463 bps
CheckV completeness	74.55% (Medium-quality)
CDS count	48
CDS density	96.39%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	312	Host agreement	82.05
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	77	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0066102_1	phrog_424	77.7	1.6e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0066102_1	UniRef90_C0CTA2	322.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0066102_1	445972.ANACOL_01819	324.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0066102_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0066102_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0066102_1	PF01507,MF_00064,TIGR00434	N/A	N/A	N/A	N/A
KOfam	UHGV-0066102_2	K02338	231.0	0	dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]	N/A
PHROG	UHGV-0066102_2	phrog_947	156.5	0	DNA polymerase processivity factor	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_2	UniRef90_A0A3D5LLL5	169.0	1.4013e-45	Beta sliding clamp	N/A
eggNOG-mapper	UHGV-0066102_2	411471.SUBVAR_07116	129.0	2.44e-31	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	N/A
Pfam	UHGV-0066102_2	PF00712	N/A	N/A	DNA polymerase III beta subunit, N-terminal domain	DNA_pol3_beta
Pfam	UHGV-0066102_2	PF02767	N/A	N/A	DNA polymerase III beta subunit, central domain	DNA_pol3_beta_2
Pfam	UHGV-0066102_2	PF02768	N/A	N/A	DNA polymerase III beta subunit, C-terminal domain	DNA_pol3_beta_3
NCBIFam	UHGV-0066102_2	TIGR00663.1	N/A	N/A	DNA polymerase III subunit beta	N/A
COG	UHGV-0066102_2	COG0592	N/A	N/A	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	N/A
structural_annotation	UHGV-0066102_2	PF02768,PF00712,PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_4	phrog_253	132.0	3.7e-39	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_4	UniRef90_A0A410PZR1	99.4	2.46e-23	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0066102_4	699218.HMPREF0889_0310	80.9	4.9e-17	Siphovirus Gp157	N/A
Pfam	UHGV-0066102_4	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0066102_4	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_5	phrog_7838	145.8	2.90069e-43	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_5	UniRef90_A0A8D9UGW3	177.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0066102_5	742767.HMPREF9456_02052	169.0	0	N/A	N/A
structural_annotation	UHGV-0066102_5	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_6	phrog_72	65.1	7.8e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_6	UniRef90_A0A8D9PDS2	174.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0066102_6	445972.ANACOL_01825	126.0	1.6e-34	N/A	N/A
structural_annotation	UHGV-0066102_6	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_7	phrog_7566	90.3	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0066102_7	1007096.BAGW01000031_gene114	101.0	1.04e-26	N/A	N/A
KOfam	UHGV-0066102_9	K03111	153.5	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0066102_9	phrog_44	150.2	9.80909e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_9	UniRef90_R6I6X7	185.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0066102_9	445972.ANACOL_01827	152.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0066102_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0066102_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0066102_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0066102_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0066102_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_10	phrog_2113	44.3	0.0000000000023	N/A	unknown function
UniRef90	UHGV-0066102_10	UniRef90_A0A832PDJ8	53.5	0.000000766	DNA replication protein	N/A
eggNOG-mapper	UHGV-0066102_10	871968.DESME_09725	53.1	0.000000185	N/A	N/A
structural_annotation	UHGV-0066102_10	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_11	phrog_11769	192.4	0	N/A	unknown function
UniRef90	UHGV-0066102_11	UniRef90_R6WQA7	238.0	0	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-0066102_11	1567013.A0A0A7RTL4_9CAUD	182.0	0	calcium ion binding	N/A
Pfam	UHGV-0066102_11	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0066102_11	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0066102_11	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-0066102_13	K01520	145.6	3.60134e-43	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0066102_13	phrog_135	129.4	2e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_13	UniRef90_UPI00164A78A3	199.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0066102_13	1282887.AUJG01000016_gene1113	157.0	0	N/A	N/A
Pfam	UHGV-0066102_13	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0066102_13	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0066102_13	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0066102_13	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0066102_14	537007.BLAHAN_05460	55.8	0.00000000677	N/A	N/A
PHROG	UHGV-0066102_16	phrog_8684	64.1	1.2e-19	N/A	unknown function
UniRef90	UHGV-0066102_16	UniRef90_A0A355KXQ4	114.0	7.45e-31	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0066102_16	1246626.BleG1_2835	54.7	0.000000037	YopX protein	N/A
Pfam	UHGV-0066102_16	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0066102_16	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0066102_18	K01160	54.9	0.0000000000000024	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0066102_18	phrog_34	62.0	1.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_18	UniRef90_A0A498CNH4	150.0	2.38221e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0066102_18	1567011.A0A0A7S133_9VIRU	55.8	0.0000000415	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-0066102_18	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_19	phrog_36	48.4	0.00000000000012	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0066102_19	1321786.HMPREF1992_00991	53.5	0.000000475	sigma factor activity	N/A
Pfam	UHGV-0066102_19	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0066102_19	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0066102_19	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0066102_20	K03497	59.9	5.2e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0066102_20	phrog_940	288.7	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0066102_20	UniRef90_UPI001C389DC7	382.0	0	N/A	N/A
eggNOG-mapper	UHGV-0066102_20	1232449.BAHV02000018_gene1534	259.0	0	N/A	N/A
PADLOC	UHGV-0066102_20	MTase_II_00015	86.1	6.1e-25	Type II methyltransferase	RM
Pfam	UHGV-0066102_20	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0066102_20	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0066102_20	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0066102_20	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0066102_22	1227349.C170_03268	54.3	0.00000697	N/A	N/A
PHROG	UHGV-0066102_23	phrog_2412	41.6	0.00000000002	N/A	unknown function
KOfam	UHGV-0066102_24	K06909	126.3	3.5e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0066102_24	phrog_2	152.4	4.2039e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0066102_24	UniRef90_UPI000B8B31AD	502.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0066102_24	1226322.HMPREF1545_00043	487.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0066102_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0066102_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0066102_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0066102_24	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_26	phrog_533	201.2	0	portal protein	head and packaging
UniRef90	UHGV-0066102_26	UniRef90_UPI000680A1DB	473.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0066102_26	693746.OBV_18040	398.0	0	N/A	N/A
structural_annotation	UHGV-0066102_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_27	phrog_581	233.7	0	minor head protein	head and packaging
UniRef90	UHGV-0066102_27	UniRef90_UPI0006814CA4	462.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0066102_27	693746.OBV_18050	489.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0066102_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0066102_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0066102_27	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0066102_28	UniRef90_UPI0005F28447	55.5	0.00000286	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0066102_28	693746.OBV_18080	55.5	0.000000554	COG NOG36366 non supervised orthologous group	N/A
PHROG	UHGV-0066102_29	phrog_422	246.1	0	major head protein	head and packaging
UniRef90	UHGV-0066102_29	UniRef90_W0U896	380.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0066102_29	693746.OBV_18090	412.0	0	N/A	N/A
structural_annotation	UHGV-0066102_29	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-0066102_30	PF13912	N/A	N/A	C2H2-type zinc finger	zf-C2H2_6
PHROG	UHGV-0066102_31	phrog_541	81.3	1e-23	head-tail adaptor	connector
UniRef90	UHGV-0066102_31	UniRef90_A0A371AQT0	102.0	9.65e-26	N/A	N/A
eggNOG-mapper	UHGV-0066102_31	411902.CLOBOL_00133	98.6	5.76e-25	N/A	N/A
eggNOG-mapper	UHGV-0066102_32	1449050.JNLE01000003_gene3887	70.1	0.0000000000000693	N/A	N/A
structural_annotation	UHGV-0066102_32	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_33	phrog_556	93.4	1.6e-27	minor head protein	head and packaging
UniRef90	UHGV-0066102_33	UniRef90_UPI001B3C5A2B	144.0	4.69996e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-0066102_33	665956.HMPREF1032_02947	82.8	4.03e-18	Minor capsid protein	N/A
Pfam	UHGV-0066102_33	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0066102_33	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_34	phrog_3266	98.3	5.7e-29	tail completion	connector
eggNOG-mapper	UHGV-0066102_34	1304866.K413DRAFT_3042	134.0	4.01e-38	N/A	N/A
structural_annotation	UHGV-0066102_34	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_35	phrog_3099	138.1	4.80001e-41	N/A	unknown function
eggNOG-mapper	UHGV-0066102_35	1304866.K413DRAFT_3043	155.0	0	N/A	N/A
structural_annotation	UHGV-0066102_35	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_36	phrog_11299	111.9	4.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-0066102_36	1298920.KI911353_gene2067	75.9	0.00000000000000282	N/A	N/A
structural_annotation	UHGV-0066102_36	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_37	phrog_706	145.6	2.70451e-43	N/A	unknown function
UniRef90	UHGV-0066102_37	UniRef90_UPI00051C36A4	206.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0066102_37	1449050.JNLE01000003_gene3882	204.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0066102_37	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0066102_37	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_38	phrog_1535	116.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0066102_38	UniRef90_A0A810PX76	83.2	0.000000000000968	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0066102_38	1232443.BAIA02000078_gene18	119.0	9.16e-25	phage tail tape measure protein	N/A
COG	UHGV-0066102_38	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0066102_38	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_39	phrog_1194	66.3	3.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0066102_39	1211844.CBLM010000023_gene979	50.8	0.0000027	N/A	N/A
Pfam	UHGV-0066102_39	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0066102_39	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_40	phrog_6616	170.9	0	tail protein	tail
eggNOG-mapper	UHGV-0066102_40	469596.HMPREF9488_01318	170.0	2.18e-41	N/A	N/A
structural_annotation	UHGV-0066102_40	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0066102_42	PF10651,NF009453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0066102_43	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_45	phrog_27545	93.9	1.7e-27	N/A	unknown function
UniRef90	UHGV-0066102_45	UniRef90_D1PRE7	105.0	1.84e-26	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-0066102_45	411471.SUBVAR_06976	105.0	3.09e-27	N/A	N/A
Pfam	UHGV-0066102_45	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0066102_46	K01448	120.4	1.8e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0066102_46	phrog_435	137.7	1.2e-40	endolysin	lysis
UniRef90	UHGV-0066102_46	UniRef90_R6HWJ2	646.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0066102_46	1203606.HMPREF1526_00346	113.0	7.68e-27	Ami_3	N/A
Pfam	UHGV-0066102_46	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0066102_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0066102_46	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0066102_47	phrog_1863	77.4	9.6e-23	N/A	unknown function
UniRef90	UHGV-0066102_47	UniRef90_A0A2K9NYV1	85.1	3.18e-20	Holin	N/A
eggNOG-mapper	UHGV-0066102_47	428125.CLOLEP_01781	89.7	6.92e-23	N/A	N/A
PHROG	UHGV-0066102_48	phrog_263	72.0	5.7e-21	holin	lysis
UniRef90	UHGV-0066102_48	UniRef90_R6ITV1	188.0	0	Phage lysis protein holin	N/A
eggNOG-mapper	UHGV-0066102_48	445971.ANASTE_00091	58.5	0.00000000099	SPP1 phage holin	N/A
Pfam	UHGV-0066102_48	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
structural_annotation	UHGV-0066102_48	PF04688,TIGR01592	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0066102	Yes	29,463	49	75	1
UHGV-0050272	No	35,649	48	83	1
UHGV-0053489	No	48,992	48	78	1
UHGV-0144616	No	30,010	49	71	1
UHGV-1450389	No	28,003	49	69	1
UHGV-0335227	No	24,640	49	60	1
UHGV-1798038	No	15,951	48	41	1
UHGV-0048447	No	16,096	49	41	1
UHGV-1564803	No	16,096	49	41	1