vOTU vOTU-017042

vOTU: vOTU-017042

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017042
Number of genomes	9
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → Woodwardibium → Woodwardibium gallinarum
Taxonomy (UHGV)	vFAM-00004 → vOTU-017042
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → Woodwardibium → Woodwardibium gallinarum
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1403384
Biosample ID	SAMEA2580212
Genome length (bp)	27,369 bps
CheckV completeness	64.39% (Medium-quality)
CDS count	50
CDS density	92.94%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → Woodwardibium → Woodwardibium sp900760275	Total connections	9	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → Woodwardibium → Woodwardibium gallinarum	Total connections	10	Host agreement	70

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1403384_2	phrog_11299	79.5	4.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1403384_2	693746.OBV_18160	136.0	3.32e-39	N/A	N/A
structural_annotation	UHGV-1403384_2	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_3	phrog_3099	91.1	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1403384_3	1232443.BAIA02000078_gene23	258.0	0	N/A	N/A
structural_annotation	UHGV-1403384_3	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_4	phrog_3266	56.6	3.4e-16	tail completion	connector
eggNOG-mapper	UHGV-1403384_4	1232443.BAIA02000078_gene24	192.0	0	N/A	N/A
structural_annotation	UHGV-1403384_4	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_5	phrog_556	68.5	8.4e-20	minor head protein	head and packaging
UniRef90	UHGV-1403384_5	UniRef90_A0A2U1BEM0	118.0	2.02e-31	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1403384_5	1226322.HMPREF1545_00054	98.2	3.6e-24	Minor capsid protein	N/A
Pfam	UHGV-1403384_5	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1403384_5	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_6	phrog_3366	95.1	6.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-1403384_6	1226322.HMPREF1545_00053	205.0	0	N/A	N/A
structural_annotation	UHGV-1403384_6	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_7	phrog_541	109.6	1.7e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1403384_7	1120998.AUFC01000030_gene2237	73.6	0.00000000000000614	N/A	N/A
PHROG	UHGV-1403384_8	phrog_10	172.2	0	major head protein	head and packaging
UniRef90	UHGV-1403384_8	UniRef90_A0A2U1BEF2	652.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1403384_8	1226322.HMPREF1545_00050	508.0	0	Phage capsid family	N/A
Pfam	UHGV-1403384_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1403384_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1403384_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1403384_8	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_9	phrog_2303	53.4	0.0000000000000029	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1403384_9	1226322.HMPREF1545_00049	174.0	0	N/A	N/A
PHROG	UHGV-1403384_10	phrog_581	263.3	0	minor head protein	head and packaging
UniRef90	UHGV-1403384_10	UniRef90_UPI001D080D49	425.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1403384_10	1226322.HMPREF1545_00046	399.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1403384_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1403384_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403384_10	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_12	phrog_533	397.4	0	portal protein	head and packaging
UniRef90	UHGV-1403384_12	UniRef90_A0A2U1BEK0	781.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-1403384_12	1226322.HMPREF1545_00044	734.0	0	N/A	N/A
Pfam	UHGV-1403384_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1403384_12	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_13	K06909	377.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1403384_13	phrog_5653	156.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1403384_13	UniRef90_A0A2U1BEH4	709.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1403384_13	1123511.KB905868_gene187	459.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1403384_13	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1403384_13	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1403384_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1403384_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1403384_13	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403384_14	UniRef90_UPI00164C5C54	161.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1403384_14	1226322.HMPREF1545_00042	147.0	5.46506e-44	N/A	N/A
structural_annotation	UHGV-1403384_14	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_15	K22300	53.7	0.0000000000000047	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1403384_15	phrog_8	64.2	2.7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1403384_15	UniRef90_UPI00095219E9	94.7	9.48e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1403384_15	865861.AZSU01000002_gene2597	67.0	0.000000000000164	Transcriptional	N/A
Pfam	UHGV-1403384_15	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1403384_15	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1403384_16	phrog_13999	42.9	0.0000000000041	N/A	unknown function
PHROG	UHGV-1403384_17	phrog_954	180.6	0	DNA methyltransferase	other
UniRef90	UHGV-1403384_17	UniRef90_UPI0004115370	245.0	0	methyltransferase	N/A
eggNOG-mapper	UHGV-1403384_17	1280698.AUJS01000007_gene1028	245.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1403384_17	MTase_II_00074	161.4	0	Type II methyltransferase	RM
Pfam	UHGV-1403384_17	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1403384_17	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1403384_17	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_18	phrog_874	157.3	0	N/A	unknown function
UniRef90	UHGV-1403384_18	UniRef90_A0A3P6JHM7	151.0	1.48958e-42	Upf86.8	N/A
eggNOG-mapper	UHGV-1403384_18	411468.CLOSCI_00298	136.0	2.55e-37	N/A	N/A
structural_annotation	UHGV-1403384_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_19	phrog_4433	151.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1403384_19	665950.HMPREF1025_01373	121.0	1.71e-30	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1403384_19	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-1403384_20	K00558	166.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1403384_20	phrog_363	237.6	0	DNA methyltransferase	other
UniRef90	UHGV-1403384_20	UniRef90_A0A7C6NZ37	321.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1403384_20	1304866.K413DRAFT_1208	308.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1403384_20	MTase_II_00058	141.7	6.60012e-42	Type II methyltransferase	RM
Pfam	UHGV-1403384_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1403384_20	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1403384_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1403384_20	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1403384_21	1235800.C819_02256	233.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1403384_21	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1403384_21	PF01507	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_22	K00390	44.3	0.0000000000021	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1403384_22	phrog_424	47.5	0.00000000000023	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1403384_22	UniRef90_A0A373SW63	329.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1403384_22	1235800.C819_02256	316.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1403384_22	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1403384_22	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-1403384_24	phrog_2113	50.4	0.000000000000025	N/A	unknown function
UniRef90	UHGV-1403384_24	UniRef90_A0A847W0Y2	94.0	1.52e-22	HTH domain-containing protein	N/A
PHROG	UHGV-1403384_25	phrog_190	119.7	2.1e-35	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403384_25	UniRef90_A0A3G6HM31	116.0	1.1e-31	N/A	N/A
eggNOG-mapper	UHGV-1403384_25	563031.HMPREF0666_01122	97.1	1.7e-24	N/A	N/A
Pfam	UHGV-1403384_25	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1403384_25	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_26	phrog_1408	80.1	5.8e-24	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1403384_26	203119.Cthe_2466	122.0	4.5e-30	N/A	N/A
structural_annotation	UHGV-1403384_26	PF01475,TIGR01610,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_27	K03111	135.8	4.79999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1403384_27	phrog_44	129.5	2.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403384_27	UniRef90_A0A316LR42	189.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1403384_27	1120746.CCNL01000010_gene1363	122.0	8.23e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1403384_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1403384_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1403384_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1403384_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1403384_27	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_28	phrog_72	57.0	2e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403384_28	UniRef90_A0A285PU94	96.3	1.3e-21	Recombinase NinB	N/A
eggNOG-mapper	UHGV-1403384_28	445972.ANACOL_00148	153.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-1403384_28	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_29	phrog_6244	79.5	3.9e-23	N/A	unknown function
UniRef90	UHGV-1403384_29	UniRef90_UPI0019603B16	90.9	1.69e-17	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-1403384_29	585502.HMPREF0645_2602	118.0	1.28e-28	N/A	N/A
structural_annotation	UHGV-1403384_29	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_30	phrog_155	74.4	1.5e-21	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403384_30	UniRef90_A0A6N2RMY2	198.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-1403384_30	1484479.DI14_04910	81.6	3.96e-16	ERF superfamily	N/A
Pfam	UHGV-1403384_30	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1403384_30	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403384_33	UniRef90_UPI0009FAA490	57.0	0.0000000053	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1403384_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1403384_33	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1403384_34	K09388	42.6	0.0000000000021	N/A	N/A
eggNOG-mapper	UHGV-1403384_34	572546.Arcpr_0008	56.2	0.000000235	N/A	N/A
COG	UHGV-1403384_34	COG3465	N/A	N/A	N/A	N/A
UniRef90	UHGV-1403384_39	UniRef90_A0A502IJ20	61.2	0.000000000035	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-1403384_39	1121121.KB894312_gene3201	60.8	0.00000000000835	N/A	N/A
Pfam	UHGV-1403384_39	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
structural_annotation	UHGV-1403384_39	PF03869,NF008671,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_40	phrog_2685	41.0	0.000000000037	partition protein ATPase	other
Pfam	UHGV-1403384_40	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
KOfam	UHGV-1403384_41	K22300	62.0	1.2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1403384_41	phrog_8	56.1	8.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1403384_41	UniRef90_A0A316PCA6	70.5	0.0000000000000116	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1403384_41	1392502.JNIO01000002_gene278	57.0	0.000000000416	sequence-specific DNA binding	N/A
Pfam	UHGV-1403384_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1403384_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1403384_41	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_42	K01356	144.0	1.60028e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1403384_42	phrog_4	130.7	1.3e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-1403384_42	UniRef90_A0A316LVL0	313.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-1403384_42	411473.RUMCAL_03095	183.0	0	N/A	N/A
PADLOC	UHGV-1403384_42	retron_type_VI_hth_cluster2_1	44.9	0.0000000000021	N/A	Retron
Pfam	UHGV-1403384_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1403384_42	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1403384_42	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1403384_42	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-1403384_44	K06400	301.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1403384_44	phrog_95	332.1	0	integrase	integration and excision
UniRef90	UHGV-1403384_44	UniRef90_A0A3A9ED02	491.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1403384_44	1378168.N510_03180	325.0	0	resolvase	N/A
Pfam	UHGV-1403384_44	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1403384_44	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1403384_44	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1403384_44	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1403384_44	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1403384_45	1226322.HMPREF1545_00079	72.8	0.00000000000000488	N/A	N/A
structural_annotation	UHGV-1403384_46	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_47	phrog_20016	225.0	0	N/A	unknown function
UniRef90	UHGV-1403384_47	UniRef90_A0A285PT46	185.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1403384_47	1226322.HMPREF1545_00077	225.0	0	N/A	N/A
structural_annotation	UHGV-1403384_47	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1403384_48	phrog_16490	131.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1403384_48	1226322.HMPREF1545_00076	147.0	1.75e-40	N/A	N/A
PHROG	UHGV-1403384_49	phrog_22984	75.2	5.1e-22	N/A	unknown function
PHROG	UHGV-1403384_50	phrog_21718	111.8	4.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-1403384_50	397290.C810_05210	77.4	4.85e-16	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1403384	Yes	27,369	56	64	1
UHGV-0191695	No	27,369	56	64	1
UHGV-1425001	No	22,890	54	54	1
UHGV-0068396	No	22,554	54	53	1
UHGV-1685359	No	17,784	54	42	1
UHGV-1854032	No	16,545	54	39	1
UHGV-0102981	No	14,707	57	35	1
UHGV-1721742	No	13,977	57	33	1
UHGV-0102820	No	13,466	56	32	1