vOTU vOTU-017257

vOTU: vOTU-017257

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017257
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vOTU-017257
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1451830
Biosample ID	N/A
Genome length (bp)	37,025 bps
CheckV completeness	77.57% (Medium-quality)
CDS count	61
CDS density	95.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285	Total connections	121	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1451830_1	K22300	59.5	7.3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1451830_1	phrog_4	49.5	0.000000000000085	transcriptional repressor	transcription regulation
UniRef90	UHGV-1451830_1	UniRef90_A0A3D5LEN7	75.5	0.00000000000000126	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1451830_1	642492.Clole_0718	67.8	0.000000000000231	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1451830_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1451830_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1451830_7	phrog_428	99.4	5.2e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1451830_7	UniRef90_A0A523QSG4	85.1	7.32e-17	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1451830_7	372457.A7DYC7_9CAUD	84.7	2.42e-17	calcium ion binding	N/A
Pfam	UHGV-1451830_7	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1451830_7	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
PHROG	UHGV-1451830_8	phrog_38038	73.6	0	N/A	unknown function
UniRef90	UHGV-1451830_8	UniRef90_UPI001C12AC6A	234.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1451830_8	693746.OBV_41630	233.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1451830_8	oMTase_00004	63.3	0	orphan methyltransferase	RM
Pfam	UHGV-1451830_8	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1451830_8	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1451830_10	phrog_355	78.2	8.2e-23	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1451830_10	UniRef90_UPI001CF32815	87.4	2.34e-19	N/A	N/A
eggNOG-mapper	UHGV-1451830_10	598467.BrE312_2145	76.6	7.19e-16	N/A	N/A
Pfam	UHGV-1451830_10	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1451830_10	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
KOfam	UHGV-1451830_11	K03111	108.2	1.2e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1451830_11	phrog_44	112.4	4.7e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1451830_11	UniRef90_R6SGE0	119.0	1.33e-31	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1451830_11	428125.CLOLEP_03546	92.4	5.42e-22	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1451830_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1451830_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1451830_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1451830_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1451830_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_17	phrog_3584	188.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1451830_17	1232428.CAVO010000003_gene1017	87.4	6.41e-18	N/A	N/A
structural_annotation	UHGV-1451830_17	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_18	phrog_824	147.9	2.66247e-44	N/A	unknown function
UniRef90	UHGV-1451830_18	UniRef90_A0A6N8GXS9	136.0	9.16e-39	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1451830_18	1321782.HMPREF1986_00332	131.0	2.05e-37	VRR-NUC domain	N/A
Pfam	UHGV-1451830_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1451830_18	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-1451830_19	K00571	162.2	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1451830_19	phrog_67	169.0	0	DNA methyltransferase	other
UniRef90	UHGV-1451830_19	UniRef90_A0A252F2H6	226.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1451830_19	1144664.F973_01743	213.0	0	DNA methylase	N/A
PADLOC	UHGV-1451830_19	MTase_II_00037	132.4	0	Type II methyltransferase	RM
Pfam	UHGV-1451830_19	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1451830_19	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1451830_19	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_20	phrog_36	45.0	0.0000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1451830_20	UniRef90_UPI000BBCA9D4	54.7	0.000000377	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-1451830_20	1304880.JAGB01000002_gene2225	60.5	0.000000000536	N/A	N/A
KOfam	UHGV-1451830_21	K07451	46.8	0.00000000000048	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1451830_21	phrog_144	80.4	2.3e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1451830_21	UniRef90_A0A0D8IV26	92.4	1.02e-22	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1451830_21	1226322.HMPREF1545_00111	87.8	1.18e-21	HNH nucleases	N/A
Pfam	UHGV-1451830_21	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1451830_21	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1451830_22	phrog_361	66.1	5e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1451830_22	UniRef90_A0A559U346	70.1	0.00000000000029	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1451830_22	1232446.BAIE02000002_gene822	69.7	0.0000000000000917	Phage terminase, small subunit	N/A
Pfam	UHGV-1451830_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1451830_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_23	phrog_9	300.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1451830_23	UniRef90_UPI0011778C59	702.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1451830_23	491915.Aflv_0661	695.0	0	Phage Terminase	N/A
Pfam	UHGV-1451830_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1451830_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1451830_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1451830_23	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_24	phrog_12	177.6	0	portal protein	head and packaging
UniRef90	UHGV-1451830_24	UniRef90_A0A0L6JH89	463.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1451830_24	398512.JQKC01000009_gene449	463.0	0	Phage portal protein	N/A
Pfam	UHGV-1451830_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1451830_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1451830_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1451830_24	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1451830_25	K06904	128.3	7.9e-38	N/A	N/A
PHROG	UHGV-1451830_25	phrog_80	150.2	1.82169e-44	head maturation protease	head and packaging
UniRef90	UHGV-1451830_25	UniRef90_UPI0008716C68	177.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1451830_25	1232453.BAIF02000028_gene2722	155.0	1.4013e-45	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1451830_25	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1451830_25	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1451830_25	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1451830_25	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_26	phrog_10	169.7	0	major head protein	head and packaging
UniRef90	UHGV-1451830_26	UniRef90_A0A7X9SQK1	292.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1451830_26	398512.JQKC01000009_gene451	289.0	0	Phage capsid family	N/A
Pfam	UHGV-1451830_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1451830_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1451830_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1451830_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_27	phrog_2550	48.9	0.000000000000074	N/A	unknown function
structural_annotation	UHGV-1451830_27	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_28	phrog_19734	61.4	1.8e-17	N/A	unknown function
UniRef90	UHGV-1451830_28	UniRef90_A0A316NL63	74.7	0.00000000000000433	Head-tail adaptor protein	N/A
Pfam	UHGV-1451830_28	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1451830_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1451830_29	908340.HMPREF9406_2574	59.7	0.000000000493	N/A	N/A
structural_annotation	UHGV-1451830_29	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1451830_30	UniRef90_UPI000C86A49F	53.1	0.00000897	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1451830_30	509191.AEDB02000020_gene3254	57.0	0.000000055	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1451830_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
PHROG	UHGV-1451830_31	phrog_88	89.0	5.2e-26	major tail protein	tail
UniRef90	UHGV-1451830_31	UniRef90_UPI00189BD00F	128.0	6.48e-33	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1451830_31	1216932.CM240_0623	95.1	1.05e-21	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1451830_31	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1451830_31	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1451830_31	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1451830_32	PF16478	N/A	N/A	N/A	N/A
KOfam	UHGV-1451830_34	K23368	42.4	0.00000000000035	TRIP11; thyroid receptor-interacting protein 11	N/A
PHROG	UHGV-1451830_34	phrog_33680	80.6	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1451830_34	1195236.CTER_5104	70.5	0.000000000823	nuclear chromosome segregation	N/A
COG	UHGV-1451830_34	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1451830_34	TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1451830_35	1195236.CTER_5103	109.0	5.27e-22	N/A	N/A
structural_annotation	UHGV-1451830_35	PF06995,PF02010,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_36	phrog_26795	136.7	1.2e-40	N/A	unknown function
eggNOG-mapper	UHGV-1451830_36	1273742.M1IQS1_9CAUD	155.0	5.13015e-42	N/A	N/A
structural_annotation	UHGV-1451830_36	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1451830_37	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1451830_38	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_39	phrog_27545	103.2	1.9e-30	N/A	unknown function
UniRef90	UHGV-1451830_39	UniRef90_A0A3D1XGA4	224.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1451830_39	1235796.C815_00903	72.4	0.000000000000295	N/A	N/A
Pfam	UHGV-1451830_39	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1451830_40	phrog_4105	93.3	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-1451830_40	397288.C806_00115	95.9	3.23e-24	N/A	N/A
KOfam	UHGV-1451830_41	K19304	99.2	4.7e-29	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1451830_41	phrog_7767	97.5	1.4e-28	metallo-endopeptidase	other
UniRef90	UHGV-1451830_41	UniRef90_A0A1E1VI95	82.8	0.0000000000000169	Muramidase	N/A
eggNOG-mapper	UHGV-1451830_41	1158601.I585_02846	94.7	5.34e-18	Peptidase family M23	N/A
Pfam	UHGV-1451830_41	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1451830_41	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-1451830_41	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1451830_41	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1451830_43	1122921.KB898212_gene2740	55.8	0.00000000799	N/A	N/A
eggNOG-mapper	UHGV-1451830_45	1408437.JNJN01000043_gene805	48.9	0.00000254	N/A	N/A
PHROG	UHGV-1451830_47	phrog_16490	87.0	2.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-1451830_47	1408437.JNJN01000043_gene803	118.0	2.14e-29	N/A	N/A
eggNOG-mapper	UHGV-1451830_48	1408437.JNJN01000043_gene802	154.0	0	N/A	N/A
eggNOG-mapper	UHGV-1451830_50	1378168.N510_03079	63.5	0.0000000000384	N/A	N/A
PHROG	UHGV-1451830_55	phrog_16123	71.9	8.4e-21	N/A	unknown function
PHROG	UHGV-1451830_56	phrog_25567	50.6	0.000000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1451830_56	1410631.JHWZ01000002_gene1263	56.6	0.00000000418	sequence-specific DNA binding	N/A
COG	UHGV-1451830_56	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1451830_56	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1451830_57	1392486.JIAF01000004_gene2652	59.7	0.0000000022	N/A	N/A
KOfam	UHGV-1451830_58	K06400	335.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1451830_58	phrog_95	322.2	0	integrase	integration and excision
UniRef90	UHGV-1451830_58	UniRef90_A0A351AWC1	387.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1451830_58	1235835.C814_03413	358.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1451830_58	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1451830_58	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1451830_58	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1451830_58	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1451830_58	PF00239,PF07508,PF19962,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1451830_60	phrog_10680	48.2	0.00000000000013	N/A	unknown function
UniRef90	UHGV-1451830_60	UniRef90_A0A5C4RZ16	52.8	0.00000916	Zinc-ribbon domain and TM2 domain-containing protein	N/A
Pfam	UHGV-1451830_60	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1451830_60	COG2314	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1451830	Yes	37,025	51	78	1
UHGV-1423143	No	37,095	51	77	1
UHGV-1448038	No	36,998	51	74	1
UHGV-1442473	No	29,182	51	59	1
UHGV-1620000	No	25,050	50	49	1
UHGV-1788539	No	19,702	50	38	1
UHGV-1570197	No	11,986	52	34	1