vOTU vOTU-017299

vOTU: vOTU-017299

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017299
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00262 → vSUBFAM-03007 → vGENUS-12817 → vOTU-017299
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1422344
Biosample ID	SAMEA4378280
Genome length (bp)	34,157 bps
CheckV completeness	61.26% (Medium-quality)
CDS count	43
CDS density	86.98%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	7	Host agreement	85.71
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	24	Host agreement	83.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1422344_1	UniRef90_UPI0015F5EABB	363.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422344_1	742723.HMPREF9477_00919	56.2	0.000000186	N/A	N/A
Pfam	UHGV-1422344_1	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1422344_3	phrog_12834	89.7	3.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1422344_3	1123013.AUIC01000006_gene1279	84.7	0.00000000000000119	N/A	N/A
structural_annotation	UHGV-1422344_3	PF07065,MF_00047,NF004085,COG1181	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422344_5	PF08281,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_8	phrog_19458	272.6	0	primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422344_8	UniRef90_A0A7X5DCK0	221.0	0	LPD15 domain-containing protein	N/A
eggNOG-mapper	UHGV-1422344_8	411459.RUMOBE_01108	227.0	0	N/A	N/A
COG	UHGV-1422344_8	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-1422344_9	PF21485,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
Pfam	UHGV-1422344_10	PF20323	N/A	N/A	N/A	DUF6618
structural_annotation	UHGV-1422344_10	PF20323	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422344_13	UniRef90_UPI001D07B715	123.0	1.31e-31	DNA-packaging protein	N/A
Pfam	UHGV-1422344_13	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
COG	UHGV-1422344_13	COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_16	phrog_3915	59.7	3.1e-17	N/A	unknown function
PHROG	UHGV-1422344_17	phrog_419	103.8	1.9e-30	N/A	unknown function
UniRef90	UHGV-1422344_17	UniRef90_D7RWI0	102.0	3.43e-26	Gp56	N/A
eggNOG-mapper	UHGV-1422344_17	764561.D7RWI0_9CAUD	102.0	5.75e-27	N/A	N/A
PHROG	UHGV-1422344_18	phrog_38	177.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1422344_18	UniRef90_UPI001D063AE7	511.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1422344_18	476272.RUMHYD_01940	385.0	0	TIGRFAM Phage	N/A
COG	UHGV-1422344_18	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422344_18	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_19	phrog_64	178.0	0	portal protein	head and packaging
UniRef90	UHGV-1422344_19	UniRef90_A0A374HKE8	413.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1422344_19	1121866.AUGK01000003_gene1429	341.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1422344_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1422344_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422344_20	UniRef90_UPI000E41BB01	67.8	0.000000000108	N/A	N/A
eggNOG-mapper	UHGV-1422344_20	1232453.BAIF02000058_gene1626	73.2	0.000000000000208	N/A	N/A
structural_annotation	UHGV-1422344_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_21	phrog_909	61.7	1.2e-17	major head protein	head and packaging
eggNOG-mapper	UHGV-1422344_21	476272.RUMHYD_01945	64.7	0.0000000000127	N/A	N/A
PHROG	UHGV-1422344_22	phrog_29	156.6	0	major head protein	head and packaging
UniRef90	UHGV-1422344_22	UniRef90_UPI000CDB6260	342.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1422344_22	476272.RUMHYD_01946	252.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1422344_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1422344_22	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422344_24	UniRef90_A0A7C7ERG0	74.7	0.00000000000001	DNA-packaging protein	N/A
structural_annotation	UHGV-1422344_25	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422344_27	1235800.C819_00481	64.3	0.000000000132	N/A	N/A
structural_annotation	UHGV-1422344_27	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422344_28	PF08873,COG5003	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422344_29	PF16463,PF17892,MF_04116,TIGR02241,NF012211,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_32	phrog_3845	64.7	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1422344_32	552396.HMPREF0863_04116	155.0	3.78351e-44	N/A	N/A
Pfam	UHGV-1422344_32	PF17032	N/A	N/A	zinc-ribbon family	zinc_ribbon_15
KOfam	UHGV-1422344_33	K10421	41.0	0.0000000000049	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1422344_33	phrog_1535	100.0	2e-29	tail length tape measure protein	tail
UniRef90	UHGV-1422344_33	UniRef90_A8RD17	877.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-1422344_33	428127.EUBDOL_01563	877.0	0	homoserine transmembrane transporter activity	N/A
COG	UHGV-1422344_33	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1422344_34	phrog_1194	74.3	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1422344_34	1232453.BAIF02000058_gene1638	78.2	6.05e-17	N/A	N/A
structural_annotation	UHGV-1422344_34	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_36	phrog_1401	61.0	1.4e-17	N/A	unknown function
structural_annotation	UHGV-1422344_36	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_37	phrog_16267	136.7	0	N/A	unknown function
UniRef90	UHGV-1422344_37	UniRef90_A0A1C7HQK3	2486.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1422344_37	552396.HMPREF0863_01647	456.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1422344_37	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1422344_37	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1422344_37	PF05113,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_39	phrog_1863	74.1	1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1422344_39	1232449.BAHV02000017_gene1511	57.8	0.000000000458	N/A	N/A
UniRef90	UHGV-1422344_40	UniRef90_A0A1C7HSY4	543.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1422344_40	658659.HMPREF0983_03290	357.0	0	lysozyme activity	N/A
Pfam	UHGV-1422344_40	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1422344_40	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1422344_40	PF00877,TIGR02594,COG3942	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422344_41	UniRef90_UPI001D52BF63	63.5	0.0000000000224	N/A	N/A
eggNOG-mapper	UHGV-1422344_41	521045.Kole_1291	49.7	0.00000105	N/A	N/A
Pfam	UHGV-1422344_41	PF11950	N/A	N/A	N/A	DUF3467
structural_annotation	UHGV-1422344_42	PF18812,COG2929	N/A	N/A	N/A	N/A
PHROG	UHGV-1422344_43	phrog_36767	47.8	0.00000000000019	N/A	unknown function
UniRef90	UHGV-1422344_43	UniRef90_A0A7X9H1B7	55.5	0.0000000279	N/A	N/A
Pfam	UHGV-1422344_43	PF10049	N/A	N/A	N/A	DUF2283
structural_annotation	UHGV-1422344_43	PF10049,COG5428	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1422344	Yes	34,157	39	61	1
UHGV-0115741	No	34,157	39	61	1
UHGV-1544616	No	30,667	38	56	1
UHGV-1943710	No	19,612	38	41	1
UHGV-1867867	No	10,698	40	22	1
UHGV-1817158	No	14,980	38	16	1
UHGV-1841637	No	12,771	39	14	1
UHGV-1826965	No	12,050	39	13	1