vOTU vOTU-017433

vOTU: vOTU-017433

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017433
Number of genomes	6
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-00048 → vOTU-017433
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1491309
Biosample ID	SAMEA2737746
Genome length (bp)	36,708 bps
CheckV completeness	63.67% (Medium-quality)
CDS count	49
CDS density	83.63%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	333	Host agreement	97.9
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1491309_1	K22299	41.2	0.00000000003	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1491309_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1491309_1	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_3	phrog_15303	73.8	1.9e-21	N/A	unknown function
KOfam	UHGV-1491309_5	K07273	173.2	0	acm; lysozyme	N/A
PHROG	UHGV-1491309_5	phrog_291	132.2	4.3e-39	endolysin	lysis
UniRef90	UHGV-1491309_5	UniRef90_A0A564U0D3	385.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1491309_5	718252.FP2_04890	232.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1491309_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1491309_5	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1491309_5	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491309_6	UniRef90_UPI001D07AB37	85.1	9.08e-21	XkdX family protein	N/A
eggNOG-mapper	UHGV-1491309_6	718252.FP2_16990	83.6	6.21e-21	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1491309_6	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1491309_6	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_10	phrog_5302	131.6	1.10002e-42	tail protein	tail
UniRef90	UHGV-1491309_10	UniRef90_UPI001CBAF2B2	417.0	0	carboxypeptidase-like regulatory domain-containing protein	N/A
eggNOG-mapper	UHGV-1491309_10	1203606.HMPREF1526_00261	544.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1491309_10	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-1491309_10	PF12985	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_11	phrog_18725	44.5	8.2e-17	N/A	unknown function
UniRef90	UHGV-1491309_11	UniRef90_UPI001D0EF571	196.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1491309_11	718252.FP2_14370	249.0	0	domain, Protein	N/A
COG	UHGV-1491309_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_11	PF15417,NF041539	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_12	phrog_13879	223.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1491309_12	1007103.AFHW01000096_gene3259	124.0	1.07e-27	N/A	N/A
Pfam	UHGV-1491309_12	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1491309_12	PF14594,PF19789,PF03256,PF09134,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_13	phrog_1194	79.6	3e-23	N/A	unknown function
Pfam	UHGV-1491309_13	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1491309_13	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_14	phrog_1535	135.5	1.4013e-45	tail length tape measure protein	tail
UniRef90	UHGV-1491309_14	UniRef90_A0A318EME6	170.0	7.67e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-1491309_14	1121866.AUGK01000003_gene1437	201.0	0	phage tail tape measure protein	N/A
COG	UHGV-1491309_14	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1491309_15	1121333.JMLH01000047_gene1011	75.1	0.00000000000000225	N/A	N/A
UniRef90	UHGV-1491309_16	UniRef90_UPI00164D364F	74.7	0.00000000000000497	N/A	N/A
eggNOG-mapper	UHGV-1491309_16	1123263.AUKY01000015_gene1618	64.7	0.00000000000614	N/A	N/A
Pfam	UHGV-1491309_16	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1491309_16	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_17	phrog_158	46.2	0.0000000000008	major tail protein	tail
UniRef90	UHGV-1491309_17	UniRef90_UPI001D087591	117.0	4.36e-31	phage tail protein	N/A
eggNOG-mapper	UHGV-1491309_17	1449343.JQLQ01000002_gene1514	55.1	0.000000206	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1491309_17	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_18	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1491309_19	476272.RUMHYD_01963	54.3	0.000000987	N/A	N/A
eggNOG-mapper	UHGV-1491309_20	1298920.KI911353_gene2656	54.3	0.00000016	N/A	N/A
structural_annotation	UHGV-1491309_20	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491309_21	UniRef90_R6N215	81.6	7.46e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-1491309_21	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_22	phrog_29	178.7	0	major head protein	head and packaging
UniRef90	UHGV-1491309_22	UniRef90_A0A2Z4QBB4	370.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1491309_22	1347368.HG964404_gene4993	262.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1491309_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1491309_22	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1491309_25	UniRef90_UPI0018A09237	71.2	0.000000000000117	N/A	N/A
eggNOG-mapper	UHGV-1491309_25	397290.C810_05229	68.9	0.000000000000177	N/A	N/A
structural_annotation	UHGV-1491309_25	PF14359,NF040588,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_26	phrog_64	143.4	1.19951e-42	portal protein	head and packaging
UniRef90	UHGV-1491309_26	UniRef90_A0A371ILT4	335.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1491309_26	1121866.AUGK01000003_gene1429	281.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1491309_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1491309_26	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_27	phrog_38	186.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1491309_27	UniRef90_A0A810QA10	493.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1491309_27	476272.RUMHYD_01940	340.0	0	TIGRFAM Phage	N/A
COG	UHGV-1491309_27	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_27	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-1491309_29	K14060	145.5	4.2039e-43	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1491309_29	phrog_125	174.0	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491309_29	UniRef90_A0A3E2UAG1	233.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1491309_29	1280664.AUIX01000018_gene2067	216.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1491309_29	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1491309_29	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1491309_29	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_30	PF20075	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_31	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1491309_33	PF19807,NF041793,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-1491309_34	K07741	71.2	3.2e-20	antB; anti-repressor protein	N/A
PHROG	UHGV-1491309_34	phrog_130	235.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1491309_34	UniRef90_A0A8D4D1X2	263.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1491309_34	1289596.M1PKL6_9CAUD	258.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1491309_34	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1491309_34	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1491309_34	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
Pfam	UHGV-1491309_35	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-1491309_35	PF12869,MF_00720,NF040991,COG4085	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_36	phrog_14275	52.1	8.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1491309_36	1280676.AUJO01000001_gene2313	66.6	0.000000000292	N/A	N/A
Pfam	UHGV-1491309_36	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-1491309_36	PF13157,MF_01537,NF007875,COG3123	N/A	N/A	N/A	N/A
COG	UHGV-1491309_40	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
KOfam	UHGV-1491309_44	K02945	44.0	0.000000000002	RP-S1, rpsA; small subunit ribosomal protein S1	N/A
UniRef90	UHGV-1491309_44	UniRef90_UPI001D00385F	181.0	0	RNA-binding protein	N/A
eggNOG-mapper	UHGV-1491309_44	445972.ANACOL_02572	207.0	0	Ribosomal protein S1-like RNA-binding domain	N/A
Pfam	UHGV-1491309_44	PF00575	N/A	N/A	S1 RNA binding domain	S1
COG	UHGV-1491309_44	COG0539	N/A	N/A	Ribosomal protein S1	N/A
PHROG	UHGV-1491309_45	phrog_428	84.8	1.5e-24	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1491309_45	UniRef90_A0A1T4YBZ2	506.0	0	N/A	N/A
eggNOG-mapper	UHGV-1491309_45	1235802.C823_05960	213.0	0	N/A	N/A
Pfam	UHGV-1491309_45	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-1491309_45	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-1491309_45	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1491309_45	PF19481,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1491309_46	phrog_1934	87.2	1.7e-25	N/A	unknown function
UniRef90	UHGV-1491309_46	UniRef90_UPI0015A6F1DE	136.0	6.12e-39	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-1491309_46	411467.BACCAP_03353	149.0	8.40779e-45	zinc-finger-containing domain	N/A
Pfam	UHGV-1491309_46	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-1491309_46	PF11672	N/A	N/A	N/A	N/A
KOfam	UHGV-1491309_47	K03091	45.5	0.0000000000013	sigH; RNA polymerase sporulation-specific sigma factor	N/A
UniRef90	UHGV-1491309_47	UniRef90_A0A1Q6KSK7	374.0	0	Sigma70_r2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1491309_47	445972.ANACOL_02590	158.0	0	Sigma-70 region 2	N/A
Pfam	UHGV-1491309_47	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
structural_annotation	UHGV-1491309_47	PF04542,MF_02064,NF006147,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1491309_48	445972.ANACOL_02591	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1491309_49	445972.ANACOL_00918	159.0	4.2039e-45	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1491309	Yes	36,708	51	64	1
UHGV-1832461	No	28,717	51	50	1
UHGV-0158885	No	23,225	51	40	1
UHGV-1843786	No	20,093	53	35	1
UHGV-1765264	No	13,864	52	24	1
UHGV-1553927	No	11,369	53	20	1