vOTU vOTU-017535

vOTU: vOTU-017535

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017535
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00614 → vGENUS-09199 → vOTU-017535
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0181649
Biosample ID	SAMEA2737800
Genome length (bp)	34,199 bps
CheckV completeness	81.09% (Medium-quality)
CDS count	61
CDS density	90.81%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	99	Host agreement	72.73
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0181649_3	phrog_38832	155.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_3	665956.HMPREF1032_03087	58.5	0.00000000959	N/A	N/A
PHROG	UHGV-0181649_5	phrog_22543	46.4	0.000000000000082	N/A	unknown function
PHROG	UHGV-0181649_8	phrog_8684	105.8	3.1e-31	N/A	unknown function
UniRef90	UHGV-0181649_8	UniRef90_A0A1C6CH94	213.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0181649_8	1226322.HMPREF1545_00036	81.6	6.61e-18	YopX protein	N/A
Pfam	UHGV-0181649_8	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0181649_8	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0181649_8	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_10	phrog_373	111.0	1.3e-32	anti-repressor	transcription regulation
UniRef90	UHGV-0181649_10	UniRef90_UPI00067F36E0	189.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0181649_10	742738.HMPREF9460_02487	145.0	4.57e-40	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0181649_10	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0181649_10	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0181649_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0181649_10	PF03374,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181649_11	UniRef90_A0A8D9PDT2	164.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0181649_11	1226322.HMPREF1545_00042	159.0	0	N/A	N/A
structural_annotation	UHGV-0181649_11	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0181649_12	K06909	377.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0181649_12	phrog_5653	159.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0181649_12	UniRef90_A0A2U1BEH4	777.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0181649_12	33035.JPJF01000106_gene3136	474.0	0	Terminase small subunit	N/A
Pfam	UHGV-0181649_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0181649_12	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0181649_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0181649_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0181649_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_13	phrog_533	426.8	0	portal protein	head and packaging
UniRef90	UHGV-0181649_13	UniRef90_U2R2D2	907.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0181649_13	1226322.HMPREF1545_00044	907.0	0	N/A	N/A
Pfam	UHGV-0181649_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0181649_13	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_14	phrog_581	307.0	0	minor head protein	head and packaging
UniRef90	UHGV-0181649_14	UniRef90_U2SBR7	606.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181649_14	1226322.HMPREF1545_00046	606.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0181649_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0181649_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181649_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_15	phrog_2303	56.1	7.6e-16	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0181649_15	1226322.HMPREF1545_00049	286.0	0	N/A	N/A
AcrCatalog	UHGV-0181649_15	cluster_74817	52.8	0.0000000000623	NA	N/A
PHROG	UHGV-0181649_16	phrog_10	169.8	0	major head protein	head and packaging
UniRef90	UHGV-0181649_16	UniRef90_U2SBS0	637.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0181649_16	1226322.HMPREF1545_00050	637.0	0	Phage capsid family	N/A
Pfam	UHGV-0181649_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0181649_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0181649_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0181649_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181649_17	1226322.HMPREF1545_00051	213.0	0	N/A	N/A
PHROG	UHGV-0181649_18	phrog_541	118.9	2.4e-35	head-tail adaptor	connector
eggNOG-mapper	UHGV-0181649_18	1120998.AUFC01000030_gene2237	70.9	0.000000000000079	N/A	N/A
PHROG	UHGV-0181649_19	phrog_3366	100.4	1.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0181649_19	1226322.HMPREF1545_00053	214.0	0	N/A	N/A
structural_annotation	UHGV-0181649_19	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_20	phrog_314	85.0	1.3e-24	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181649_20	UniRef90_UPI00156F7603	141.0	2.77e-38	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0181649_20	1399942.U3PCR9_9CAUD	108.0	1.32e-26	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0181649_20	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0181649_20	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
structural_annotation	UHGV-0181649_20	PF19835,PF07460,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_21	phrog_556	65.5	7e-19	minor head protein	head and packaging
UniRef90	UHGV-0181649_21	UniRef90_A0A2U1BEM0	150.0	9.94922e-44	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0181649_21	1226322.HMPREF1545_00054	126.0	3.16e-35	Minor capsid protein	N/A
Pfam	UHGV-0181649_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0181649_21	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_22	phrog_3266	44.8	0.0000000000018	tail completion	connector
eggNOG-mapper	UHGV-0181649_22	1232443.BAIA02000078_gene24	139.0	2e-40	N/A	N/A
structural_annotation	UHGV-0181649_22	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_23	phrog_3099	88.4	9.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0181649_23	1232443.BAIA02000078_gene23	291.0	0	N/A	N/A
structural_annotation	UHGV-0181649_23	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_24	phrog_11299	87.3	1.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0181649_24	693746.OBV_18160	189.0	0	N/A	N/A
structural_annotation	UHGV-0181649_24	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_25	phrog_706	109.0	3.8e-32	N/A	unknown function
UniRef90	UHGV-0181649_25	UniRef90_A0A2U1BEN4	292.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0181649_25	693746.OBV_18170	198.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0181649_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0181649_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_26	phrog_1535	107.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0181649_26	UniRef90_A0A810PX76	120.0	1.3e-24	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0181649_26	693746.OBV_18190	239.0	0	domain protein	N/A
COG	UHGV-0181649_26	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181649_26	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_27	phrog_1194	72.4	5.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0181649_27	1226322.HMPREF1545_00060	266.0	0	N/A	N/A
structural_annotation	UHGV-0181649_27	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_28	phrog_13879	440.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_28	1226322.HMPREF1545_00061	940.0	0	N/A	N/A
structural_annotation	UHGV-0181649_28	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_29	phrog_18725	210.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_29	1226322.HMPREF1545_00062	336.0	0	N/A	N/A
PHROG	UHGV-0181649_31	phrog_10993	588.9	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0181649_31	UniRef90_U2SK79	763.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181649_31	1226322.HMPREF1545_00064	763.0	0	N/A	N/A
Pfam	UHGV-0181649_31	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0181649_31	PF19789,PF19081,PF09136,MF_04116,NF032891,COG3401	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181649_33	552398.HMPREF0866_01159	63.9	0.000000000128	N/A	N/A
PHROG	UHGV-0181649_34	phrog_937	67.7	1.2e-19	hemolysin	other
eggNOG-mapper	UHGV-0181649_34	1226322.HMPREF1545_00067	223.0	0	N/A	N/A
PHROG	UHGV-0181649_35	phrog_23092	158.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_35	1226322.HMPREF1545_02799	145.0	9.10844e-44	N/A	N/A
PHROG	UHGV-0181649_36	phrog_1129	70.5	1.7e-20	holin	lysis
UniRef90	UHGV-0181649_36	UniRef90_A0A1C7FPV3	130.0	1.38e-37	Enolase	N/A
eggNOG-mapper	UHGV-0181649_36	1226322.HMPREF1545_00069	165.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0181649_36	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0181649_36	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0181649_37	K01447	111.3	1.3e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0181649_37	phrog_670	155.0	0	endolysin	lysis
UniRef90	UHGV-0181649_37	UniRef90_U2SBT6	430.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0181649_37	1226322.HMPREF1545_00070	430.0	0	Ami_2	N/A
Pfam	UHGV-0181649_37	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0181649_37	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0181649_37	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181649_38	UniRef90_U2R3E6	132.0	4.34e-39	KORA domain-containing protein	N/A
structural_annotation	UHGV-0181649_38	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_39	phrog_3754	123.0	1.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0181649_39	1226322.HMPREF1545_00073	259.0	0	N/A	N/A
PHROG	UHGV-0181649_40	phrog_21718	174.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_40	397290.C810_05210	56.2	0.0000000716	N/A	N/A
PHROG	UHGV-0181649_41	phrog_22984	122.0	1.9e-36	N/A	unknown function
PHROG	UHGV-0181649_42	phrog_16490	143.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0181649_42	1226322.HMPREF1545_00076	226.0	0	N/A	N/A
PHROG	UHGV-0181649_43	phrog_20016	191.6	0	N/A	unknown function
UniRef90	UHGV-0181649_43	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0181649_43	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0181649_43	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181649_44	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181649_45	1226322.HMPREF1545_00079	220.0	0	N/A	N/A
KOfam	UHGV-0181649_46	K14059	156.2	0	int; integrase	N/A
PHROG	UHGV-0181649_46	phrog_1	161.3	0	integrase	integration and excision
UniRef90	UHGV-0181649_46	UniRef90_A0A1C5W824	708.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0181649_46	445972.ANACOL_01797	302.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0181649_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0181649_46	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0181649_46	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_47	phrog_33872	43.7	0.0000000000054	N/A	unknown function
eggNOG-mapper	UHGV-0181649_47	1007096.BAGW01000023_gene158	99.0	6.48e-26	N/A	N/A
PHROG	UHGV-0181649_48	phrog_33872	47.9	0.00000000000012	N/A	unknown function
PHROG	UHGV-0181649_49	phrog_2546	48.8	0.000000000000044	N/A	unknown function
UniRef90	UHGV-0181649_49	UniRef90_UPI001ADD7737	95.9	9.15e-22	ribosomal protein L7/L12	N/A
eggNOG-mapper	UHGV-0181649_49	742740.HMPREF9474_01531	81.6	5.86e-17	zinc-ribbon domain	N/A
Pfam	UHGV-0181649_49	PF17032	N/A	N/A	zinc-ribbon family	zinc_ribbon_15
structural_annotation	UHGV-0181649_49	PF13248	N/A	N/A	N/A	N/A
KOfam	UHGV-0181649_50	K07448	121.0	1.1e-35	mrr; restriction system protein	N/A
PHROG	UHGV-0181649_50	phrog_19856	40.7	0.000000000024	N/A	unknown function
UniRef90	UHGV-0181649_50	UniRef90_A0A416IWX8	166.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0181649_50	1280680.AUJU01000007_gene2172	142.0	2.69e-40	Restriction endonuclease	N/A
PADLOC	UHGV-0181649_50	ZorD1_00005	63.7	2.6e-18	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0181649_50	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0181649_50	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0181649_51	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_52	phrog_8	42.8	0.000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181649_52	UniRef90_A0A1V0QCF9	88.6	2.11e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0181649_52	1226322.HMPREF1545_00148	74.7	0.00000000000000118	Transcriptional	N/A
Pfam	UHGV-0181649_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0181649_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0181649_52	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181649_54	UniRef90_U2SKF4	130.0	2.75e-38	Toxin-antitoxin system, antitoxin component, Xre domain protein	N/A
Pfam	UHGV-0181649_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0181649_54	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181649_58	UniRef90_A0A8D9PDM8	56.6	0.00000000428	Pyocin activator protein	N/A
structural_annotation	UHGV-0181649_60	PF06003,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-0181649_61	phrog_7713	59.6	3.8e-17	N/A	unknown function
Pfam	UHGV-0181649_61	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
COG	UHGV-0181649_61	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181649_61	PF13599	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0181649	Yes	34,199	51	81	1
UHGV-0078334	No	24,767	52	58	1
UHGV-1447805	No	24,767	52	58	1
UHGV-0276184	No	23,146	52	54	1
UHGV-2024377	No	20,828	50	48	1
UHGV-1596255	No	16,753	50	39	1
UHGV-1600507	No	16,631	50	39	1