vOTU vOTU-017583

vOTU: vOTU-017583

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-017583
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-04042 → vOTU-017583
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2125823
Biosample ID	N/A
Genome length (bp)	31,805 bps
CheckV completeness	81.28% (Medium-quality)
CDS count	42
CDS density	94.17%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615	Total connections	29	Host agreement	89.66
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UMGS1375 → UMGS1375 sp900066615	Total connections	58	Host agreement	89.66

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2125823_3	K03546	59.2	5.4e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-2125823_3	phrog_1499	502.8	0	N/A	unknown function
UniRef90	UHGV-2125823_3	UniRef90_A0A1C6J680	775.0	0	Predicted ATP-binding protein involved in virulence	N/A
eggNOG-mapper	UHGV-2125823_3	742723.HMPREF9477_00929	596.0	0	AAA domain	N/A
PADLOC	UHGV-2125823_3	AAA_15	43.4	0.0000000000093	N/A	N/A
Pfam	UHGV-2125823_3	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2125823_3	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2125823_3	TIGR03185,COG5293	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_4	phrog_124	254.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2125823_4	UniRef90_UPI001D084FBB	530.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-2125823_4	1235792.C808_05390	431.0	0	AAA domain	N/A
Pfam	UHGV-2125823_4	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2125823_4	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_5	phrog_2698	167.3	0	N/A	unknown function
UniRef90	UHGV-2125823_5	UniRef90_A0A414EG49	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-2125823_5	478749.BRYFOR_07585	181.0	0	N/A	N/A
Pfam	UHGV-2125823_5	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-2125823_5	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-2125823_6	K17677	353.0	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-2125823_6	phrog_16	286.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2125823_6	UniRef90_A0A1C6J6K4	1043.0	0	Type-1 restriction enzyme R protein	N/A
eggNOG-mapper	UHGV-2125823_6	1235792.C808_05388	905.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-2125823_6	mREase_IV_00005	134.5	8.8e-40	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2125823_6	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2125823_6	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2125823_6	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-2125823_6	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-2125823_7	K07505	400.4	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-2125823_7	phrog_2597	1197.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2125823_7	UniRef90_UPI001570A95E	1568.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2125823_7	411462.DORLON_00808	1137.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-2125823_7	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-2125823_7	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-2125823_7	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-2125823_7	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_8	phrog_16687	69.1	4.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-2125823_8	1214217.ALNF01000014_gene1395	50.8	0.000000124	N/A	N/A
KOfam	UHGV-2125823_9	K01160	45.6	0.0000000000017	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2125823_9	phrog_140	94.8	9.9e-28	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2125823_9	UniRef90_R6CHZ9	281.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-2125823_9	411462.DORLON_00806	221.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2125823_9	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2125823_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2125823_9	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-2125823_11	UniRef90_UPI00157081C0	401.0	0	N/A	N/A
eggNOG-mapper	UHGV-2125823_11	478749.BRYFOR_07594	107.0	6.71e-26	N/A	N/A
Pfam	UHGV-2125823_11	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-2125823_13	phrog_6568	63.9	1.6e-18	N/A	unknown function
PHROG	UHGV-2125823_14	phrog_11237	90.6	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-2125823_14	610130.Closa_0738	154.0	0	N/A	N/A
KOfam	UHGV-2125823_15	K07474	106.4	5.3e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2125823_15	phrog_51	125.5	3.6e-37	terminase small subunit	head and packaging
UniRef90	UHGV-2125823_15	UniRef90_UPI000E4E3378	271.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-2125823_15	608534.GCWU000341_02298	180.0	0	Terminase small subunit	N/A
Pfam	UHGV-2125823_15	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2125823_15	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2125823_15	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2125823_16	1304866.K413DRAFT_0811	299.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2125823_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
KOfam	UHGV-2125823_17	K06909	61.0	2.2e-17	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2125823_17	phrog_10250	54.8	3.9e-16	N/A	unknown function
UniRef90	UHGV-2125823_17	UniRef90_UPI001C02BD5C	608.0	0	terminase	N/A
eggNOG-mapper	UHGV-2125823_17	742740.HMPREF9474_03500	503.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2125823_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2125823_17	PF17289,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_18	phrog_533	307.6	0	portal protein	head and packaging
UniRef90	UHGV-2125823_18	UniRef90_UPI001C03775E	1043.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-2125823_18	742740.HMPREF9474_03501	733.0	0	N/A	N/A
structural_annotation	UHGV-2125823_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_19	phrog_25639	120.3	4.6e-36	N/A	unknown function
eggNOG-mapper	UHGV-2125823_19	742740.HMPREF9474_03502	84.3	1.13e-20	N/A	N/A
PHROG	UHGV-2125823_20	phrog_581	267.9	0	minor head protein	head and packaging
UniRef90	UHGV-2125823_20	UniRef90_UPI001C024B83	993.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2125823_20	33035.JPJF01000093_gene2255	499.0	0	N/A	N/A
Pfam	UHGV-2125823_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2125823_20	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-2125823_20	PF06152	N/A	N/A	N/A	N/A
COG	UHGV-2125823_21	COG0550	N/A	N/A	DNA topoisomerase IA	N/A
PHROG	UHGV-2125823_22	phrog_872	155.0	0	N/A	unknown function
UniRef90	UHGV-2125823_22	UniRef90_A0A413P9Z7	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-2125823_22	1123288.SOV_4c02650	166.0	0	N/A	N/A
Pfam	UHGV-2125823_22	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-2125823_22	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-2125823_22	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_23	phrog_13199	79.1	3.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-2125823_23	476272.RUMHYD_02851	95.5	2.84e-25	N/A	N/A
PHROG	UHGV-2125823_24	phrog_2303	138.0	7.09996e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-2125823_24	1304866.K413DRAFT_0806	184.0	0	N/A	N/A
PHROG	UHGV-2125823_25	phrog_422	275.8	0	major head protein	head and packaging
UniRef90	UHGV-2125823_25	UniRef90_UPI001C03381A	632.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-2125823_25	663278.Ethha_1589	401.0	0	N/A	N/A
structural_annotation	UHGV-2125823_25	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_26	phrog_541	86.2	3.1e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-2125823_26	1298920.KI911353_gene4848	198.0	0	N/A	N/A
PHROG	UHGV-2125823_27	phrog_8710	145.6	1.09301e-43	N/A	unknown function
eggNOG-mapper	UHGV-2125823_27	742740.HMPREF9474_03508	147.0	9.80909e-45	N/A	N/A
structural_annotation	UHGV-2125823_27	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_28	phrog_556	56.2	5.9e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-2125823_28	742740.HMPREF9474_03509	182.0	0	N/A	N/A
PHROG	UHGV-2125823_29	phrog_2595	96.5	2.2e-28	head-tail connector protein	connector
UniRef90	UHGV-2125823_29	UniRef90_UPI001C00BA9C	263.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2125823_29	483218.BACPEC_01150	126.0	9.52e-36	N/A	N/A
Pfam	UHGV-2125823_29	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-2125823_29	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_30	phrog_820	114.3	7.5e-34	major tail protein	tail
eggNOG-mapper	UHGV-2125823_30	1282664.H354_06691	206.0	0	N/A	N/A
structural_annotation	UHGV-2125823_30	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_31	phrog_8300	90.3	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-2125823_31	1282664.H354_06701	102.0	5.06e-27	N/A	N/A
structural_annotation	UHGV-2125823_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_32	phrog_8355	81.9	3.9e-24	N/A	unknown function
UniRef90	UHGV-2125823_32	UniRef90_UPI001C031F13	151.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2125823_32	33035.JPJF01000093_gene2244	81.3	2.45e-19	N/A	N/A
PHROG	UHGV-2125823_33	phrog_1535	361.9	0	tail length tape measure protein	tail
UniRef90	UHGV-2125823_33	UniRef90_A0A2Y9BKW0	736.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-2125823_33	33035.JPJF01000093_gene2243	827.0	0	phage tail tape measure protein	N/A
COG	UHGV-2125823_33	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2125823_33	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_34	phrog_1194	79.1	4.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-2125823_34	33035.JPJF01000093_gene2242	153.0	0	N/A	N/A
structural_annotation	UHGV-2125823_34	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_35	phrog_6616	175.1	0	tail protein	tail
eggNOG-mapper	UHGV-2125823_35	742741.HMPREF9475_02362	67.4	0.00000000384	N/A	N/A
eggNOG-mapper	UHGV-2125823_36	1408428.JNJP01000079_gene3365	125.0	4.38e-28	Phage tail-collar fibre protein	N/A
COG	UHGV-2125823_36	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-2125823_36	PF18614,MF_00216,NF003076,COG1585	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_37	phrog_16164	83.5	1.4e-24	N/A	unknown function
PHROG	UHGV-2125823_38	phrog_215	44.4	0.0000000000035	structural protein with Ig domain	head and packaging
Pfam	UHGV-2125823_38	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-2125823_38	COG4085	N/A	N/A	DNA/RNA endonuclease YhcR, contains UshA esterase domain	N/A
KOfam	UHGV-2125823_39	K03651	64.6	1.5e-18	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-2125823_39	phrog_7158	126.2	2.1e-37	N/A	unknown function
UniRef90	UHGV-2125823_39	UniRef90_A0A1E8F0N5	111.0	1.06e-22	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	N/A
eggNOG-mapper	UHGV-2125823_39	1033738.CAEP01000136_gene2868	75.5	0.0000000000241	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-2125823_39	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-2125823_39	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-2125823_39	PF12850,PF10014,MF_00905,NF008359,COG5555	N/A	N/A	N/A	N/A
PHROG	UHGV-2125823_40	phrog_37799	69.1	3.1e-20	N/A	unknown function
UniRef90	UHGV-2125823_40	UniRef90_UPI00156F2401	264.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-2125823_40	1151292.QEW_0990	139.0	1.36999e-40	Bacteriophage holin family	N/A
Pfam	UHGV-2125823_40	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2125823_40	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2125823_40	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2125823_40	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-2125823_41	K01447	73.7	3.1e-21	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2125823_41	phrog_1794	127.3	1.5e-37	amidase	lysis
UniRef90	UHGV-2125823_41	UniRef90_A0A1C6J4E5	591.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-2125823_41	397290.C810_00440	162.0	1.35926e-43	Ami_2	N/A
Pfam	UHGV-2125823_41	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2125823_41	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-2125823_41	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-2125823_42	UniRef90_UPI0018AAE08D	255.0	0	N/A	N/A
eggNOG-mapper	UHGV-2125823_42	500632.CLONEX_01893	330.0	0	N/A	N/A
Pfam	UHGV-2125823_42	PF19552	N/A	N/A	N/A	DUF6075

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2125823	Yes	31,805	45	81	1
UHGV-0011394	No	31,480	44	80	1
UHGV-0014437	No	31,480	44	80	1
UHGV-0064742	No	27,676	45	69	1
UHGV-1732368	No	14,737	47	36	1
UHGV-1595068	No	11,508	47	28	1
UHGV-1556499	No	11,315	47	28	1