vOTU vOTU-018304

vOTU: vOTU-018304

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018304
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-00738 → vGENUS-00975 → vOTU-018304
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0044159
Biosample ID	SAMEA2042571
Genome length (bp)	32,218 bps
CheckV completeness	86.59% (Medium-quality)
CDS count	52
CDS density	96.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	1256	Host agreement	92.68
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	106	Host agreement	98.11

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0044159_1	phrog_263	78.5	5.2e-23	holin	lysis
UniRef90	UHGV-0044159_1	UniRef90_A0A3D5TN47	179.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0044159_1	315750.BPUM_3085	61.2	0.000000000036	SPP1 phage holin	N/A
Pfam	UHGV-0044159_1	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0044159_1	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0044159_1	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_2	phrog_9428	119.1	4.4e-37	N/A	unknown function
UniRef90	UHGV-0044159_2	UniRef90_A0A3D5TMQ6	151.0	7.00649e-45	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0044159_2	1519439.JPJG01000059_gene1948	110.0	1.63e-29	N/A	N/A
KOfam	UHGV-0044159_3	K01448	120.3	2e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0044159_3	phrog_435	152.8	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0044159_3	UniRef90_A0A3D5TMB6	591.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0044159_3	1203606.HMPREF1526_00962	99.8	8.03e-22	Ami_3	N/A
Pfam	UHGV-0044159_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0044159_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0044159_3	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_4	phrog_27545	96.4	3.2e-28	N/A	unknown function
UniRef90	UHGV-0044159_4	UniRef90_R6ELD6	86.3	7.09e-19	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0044159_4	411471.SUBVAR_06976	90.5	3.26e-21	N/A	N/A
Pfam	UHGV-0044159_4	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
Pfam	UHGV-0044159_6	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0044159_6	PF13306	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_9	phrog_1067	361.8	0	minor head protein	head and packaging
UniRef90	UHGV-0044159_9	UniRef90_R6GLF8	345.0	0	Phage minor structural protein region	N/A
eggNOG-mapper	UHGV-0044159_9	1160721.RBI_I01574	317.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0044159_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0044159_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0044159_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0044159_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_10	phrog_33	67.3	3.8e-19	distal tail protein Dit	tail
UniRef90	UHGV-0044159_10	UniRef90_R6GVG8	135.0	1.97e-35	Phage putative tail component N-domain protein	N/A
eggNOG-mapper	UHGV-0044159_10	1444306.JFZC01000034_gene2623	150.0	3.30006e-42	tail component	N/A
COG	UHGV-0044159_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0044159_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_11	phrog_58	101.8	1.6e-35	tail length tape measure protein	tail
UniRef90	UHGV-0044159_11	UniRef90_A0A316QKN8	290.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0044159_11	994573.T472_0201810	269.0	0	tape measure	N/A
COG	UHGV-0044159_11	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-0044159_11	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044159_12	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_13	phrog_88	79.1	5.6e-23	major tail protein	tail
UniRef90	UHGV-0044159_13	UniRef90_UPI001D07B441	135.0	8.35e-37	major tail protein	N/A
eggNOG-mapper	UHGV-0044159_13	411459.RUMOBE_00930	124.0	4.93e-33	N/A	N/A
NCBIFam	UHGV-0044159_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0044159_13	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_14	phrog_78	53.3	0.0000000000000053	tail terminator	connector
eggNOG-mapper	UHGV-0044159_14	1238184.CM001792_gene2512	71.2	0.0000000000000162	N/A	N/A
structural_annotation	UHGV-0044159_14	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_15	phrog_5	42.4	0.000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-0044159_15	UniRef90_A0A174CK72	99.4	6.97e-24	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0044159_15	1195236.CTER_5108	89.0	1.18e-20	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0044159_15	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_16	phrog_1951	48.7	0.00000000000013	head-tail adaptor	connector
eggNOG-mapper	UHGV-0044159_16	457396.CSBG_01051	53.9	0.0000000567	head-tail adaptor	N/A
Pfam	UHGV-0044159_16	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
COG	UHGV-0044159_16	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
PHROG	UHGV-0044159_17	phrog_40	40.5	0.000000000041	head-tail adaptor Ad1	connector
UniRef90	UHGV-0044159_17	UniRef90_UPI0006544DF9	52.4	0.000000672	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0044159_17	1274524.BSONL12_06143	51.6	0.000000362	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0044159_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0044159_17	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0044159_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_18	phrog_10	155.5	0	major head protein	head and packaging
UniRef90	UHGV-0044159_18	UniRef90_UPI000C7BECD8	312.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0044159_18	1414720.CBYM010000002_gene572	234.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0044159_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0044159_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0044159_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0044159_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_19	phrog_16951	256.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0044159_19	246199.CUS_7602	191.0	0	N/A	N/A
structural_annotation	UHGV-0044159_19	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_20	phrog_12	272.1	0	portal protein	head and packaging
UniRef90	UHGV-0044159_20	UniRef90_UPI001C11FE4E	491.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0044159_20	634956.Geoth_0787	434.0	0	Phage portal protein	N/A
Pfam	UHGV-0044159_20	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0044159_20	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0044159_20	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0044159_20	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_21	phrog_9	333.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0044159_21	UniRef90_UPI000C7CE66A	722.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0044159_21	742738.HMPREF9460_04067	653.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0044159_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0044159_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0044159_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0044159_21	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_22	phrog_83	84.0	1.9e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0044159_22	UniRef90_UPI00067FA7FA	134.0	2.18e-37	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0044159_22	536232.CLM_2059	133.0	1.27e-37	Phage terminase, small subunit	N/A
Pfam	UHGV-0044159_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0044159_22	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0044159_22	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0044159_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0044159_23	K07451	48.7	0.00000000000014	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0044159_23	phrog_144	107.0	1.5e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0044159_23	UniRef90_UPI0006D7C695	94.4	3.45e-22	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0044159_23	1508644.SFBmNL_01550	88.2	9.02e-21	HNH endonuclease	N/A
Pfam	UHGV-0044159_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0044159_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0044159_23	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_25	phrog_36	46.0	0.00000000000082	transcriptional regulator	transcription regulation
COG	UHGV-0044159_25	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0044159_25	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
Pfam	UHGV-0044159_26	PF11781	N/A	N/A	Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7	zf-RRN7
Pfam	UHGV-0044159_27	PF15499	N/A	N/A	Ubiquitin-specific peptidase-like, SUMO isopeptidase	Peptidase_C98
PHROG	UHGV-0044159_28	phrog_3584	130.7	9.1e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0044159_28	537013.CLOSTMETH_02141	79.7	0.00000000000000165	N/A	N/A
structural_annotation	UHGV-0044159_28	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_29	phrog_24518	45.4	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0044159_29	693746.OBV_25370	80.9	1.91e-16	N/A	N/A
eggNOG-mapper	UHGV-0044159_30	1235790.C805_00069	67.4	0.000000000000123	Restriction alleviation protein Lar	N/A
PHROG	UHGV-0044159_35	phrog_15609	145.1	4.59626e-43	N/A	unknown function
UniRef90	UHGV-0044159_35	UniRef90_A0A3A6ESC2	107.0	3.36e-22	N/A	N/A
eggNOG-mapper	UHGV-0044159_35	641112.ACOK01000073_gene2872	70.5	0.0000000000374	N/A	N/A
Pfam	UHGV-0044159_35	PF11300	N/A	N/A	N/A	DUF3102
structural_annotation	UHGV-0044159_35	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_36	phrog_8470	305.5	0	N/A	unknown function
UniRef90	UHGV-0044159_36	UniRef90_UPI001409E5A2	215.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0044159_36	1117108.PAALTS15_13637	190.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0044159_36	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0044159_36	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_37	phrog_7445	62.6	6.7e-18	N/A	unknown function
UniRef90	UHGV-0044159_37	UniRef90_UPI001B3C69A2	74.7	0.00000000000000445	Cas9 inhibitor AcrIIA9 family protein	N/A
Pfam	UHGV-0044159_37	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0044159_37	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_38	phrog_824	132.7	1.3e-39	N/A	unknown function
UniRef90	UHGV-0044159_38	UniRef90_A0A3D5TLJ2	323.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0044159_38	1235792.C808_00075	140.0	4.1e-39	VRR_NUC	N/A
Pfam	UHGV-0044159_38	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0044159_38	PF08774,COG1996	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_42	phrog_22040	42.0	0.000000000013	N/A	unknown function
structural_annotation	UHGV-0044159_42	PF07073,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0044159_43	UniRef90_A0A2V2EEG3	75.1	0.000000000000199	N/A	N/A
eggNOG-mapper	UHGV-0044159_43	665950.HMPREF1025_02540	65.5	0.000000000364	N/A	N/A
Pfam	UHGV-0044159_43	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0044159_45	K01449	61.8	8.7e-18	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0044159_45	phrog_18750	148.0	6.44597e-44	N/A	unknown function
UniRef90	UHGV-0044159_45	UniRef90_A0A3D5TM41	211.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0044159_45	1203606.HMPREF1526_01876	152.0	3.92364e-44	Cell wall hydrolase	N/A
Pfam	UHGV-0044159_45	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0044159_45	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0044159_45	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_47	phrog_6058	46.6	0.00000000000038	N/A	unknown function
eggNOG-mapper	UHGV-0044159_47	693746.OBV_19810	48.9	0.00000527	N/A	N/A
KOfam	UHGV-0044159_48	K07729	50.4	0.000000000000053	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0044159_48	phrog_8	40.5	0.000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-0044159_48	UniRef90_A0A3D5TL86	144.0	1.41531e-43	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0044159_48	718252.FP2_16270	67.8	0.0000000000000645	sequence-specific DNA binding	N/A
Pfam	UHGV-0044159_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0044159_48	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0044159_48	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0044159_49	K07729	60.7	3.3e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0044159_49	phrog_8	58.2	2.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0044159_49	UniRef90_A0A3D5TL51	218.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0044159_49	445972.ANACOL_01759	75.9	2.59e-16	sequence-specific DNA binding	N/A
Pfam	UHGV-0044159_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0044159_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0044159_49	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0044159_50	phrog_87	78.4	7.4e-23	metallo-protease	other
UniRef90	UHGV-0044159_50	UniRef90_A0A1Y4S739	152.0	8.40779e-45	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0044159_50	1507.HMPREF0262_00423	132.0	1.39e-37	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0044159_50	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0044159_50	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0044159_50	PF06114,COG2856	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0044159_51	PF08797,TIGR00086	N/A	N/A	N/A	N/A
KOfam	UHGV-0044159_52	K14059	159.5	0	int; integrase	N/A
PHROG	UHGV-0044159_52	phrog_1	191.7	0	integrase	integration and excision
UniRef90	UHGV-0044159_52	UniRef90_A0A7K4BXA9	292.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0044159_52	693746.OBV_19730	268.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0044159_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0044159_52	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0044159_52	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0044159	Yes	32,218	51	87	1
UHGV-1427487	No	23,021	50	60	1
UHGV-1380758	No	19,647	52	51	1
UHGV-0186471	No	14,254	52	39	1
UHGV-0042344	No	13,367	52	37	1