vOTU vOTU-018453

vOTU: vOTU-018453

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018453
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00538 → vGENUS-01144 → vOTU-018453
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1524803
Biosample ID	SAMEA2737812
Genome length (bp)	49,158 bps
CheckV completeness	84.38% (Medium-quality)
CDS count	80
CDS density	80.26%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	44	Host agreement	95.45
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	7	Host agreement	57.14

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1524803_1	phrog_9804	109.0	4.2e-32	N/A	unknown function
UniRef90	UHGV-1524803_1	UniRef90_A0A416G2U5	155.0	5.60519e-45	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_1	1121344.JHZO01000003_gene981	109.0	2.84e-28	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1524803_1	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1524803_1	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_2	phrog_5708	208.3	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524803_2	UniRef90_A0A2H4JF78	222.0	0	Putative DNA replication protein	N/A
eggNOG-mapper	UHGV-1524803_2	1391647.AVSV01000022_gene2531	212.0	0	DnaD domain protein	N/A
COG	UHGV-1524803_2	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1524803_2	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_3	phrog_1682	45.1	0.0000000000014	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524803_3	UniRef90_UPI001652358F	67.8	0.000000000000686	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1524803_3	33035.JPJF01000071_gene4466	67.8	0.000000000000101	crossover junction endodeoxyribonuclease activity	N/A
COG	UHGV-1524803_3	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-1524803_4	phrog_561	159.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524803_4	UniRef90_UPI001904C527	176.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1524803_4	537013.CLOSTMETH_01715	179.0	0	N/A	N/A
Pfam	UHGV-1524803_4	PF03837	N/A	N/A	RecT family	RecT
KOfam	UHGV-1524803_5	K10906	98.1	2.9e-38	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1524803_5	phrog_412	237.4	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524803_5	UniRef90_A0A1C6GFL6	218.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-1524803_5	1454004.AW11_02382	164.0	0	N/A	N/A
Pfam	UHGV-1524803_5	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1524803_5	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1524803_5	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
KOfam	UHGV-1524803_10	K07741	62.0	2.1e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-1524803_10	phrog_373	130.4	1.5e-38	anti-repressor	transcription regulation
UniRef90	UHGV-1524803_10	UniRef90_A0A1Q9J883	404.0	0	Toxin Bro	N/A
eggNOG-mapper	UHGV-1524803_10	552396.HMPREF0863_00756	214.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1524803_10	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1524803_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1524803_10	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-1524803_18	K18830	73.0	4.9e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1524803_18	phrog_8	54.3	0.0000000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524803_18	UniRef90_A0A3R6UL37	150.0	9.80909e-45	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1524803_18	1235790.C805_00012	122.0	2.95e-34	Helix-turn-helix domain	N/A
Pfam	UHGV-1524803_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1524803_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1524803_18	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_19	phrog_4	41.9	0.000000000017	transcriptional repressor	transcription regulation
UniRef90	UHGV-1524803_19	UniRef90_B0G1X6	275.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_19	742765.HMPREF9457_02739	275.0	0	N/A	N/A
Pfam	UHGV-1524803_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1524803_19	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_20	742765.HMPREF9457_02739	55.8	0.00000000607	N/A	N/A
structural_annotation	UHGV-1524803_21	PF00041	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_22	1304866.K413DRAFT_0769	70.5	0.000000000000997	N/A	N/A
PHROG	UHGV-1524803_23	phrog_18725	58.3	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1524803_23	1304866.K413DRAFT_0773	74.7	0.00000000000000285	N/A	N/A
PHROG	UHGV-1524803_24	phrog_13879	289.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1524803_24	1304866.K413DRAFT_0774	417.0	0	N/A	N/A
structural_annotation	UHGV-1524803_24	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_25	phrog_1194	50.1	0.000000000000044	N/A	unknown function
eggNOG-mapper	UHGV-1524803_25	585501.HMPREF6123_0824	81.6	3.44e-18	N/A	N/A
structural_annotation	UHGV-1524803_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_26	phrog_167	356.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1524803_26	UniRef90_UPI00131A0471	715.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_26	397290.C810_01419	461.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-1524803_26	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1524803_26	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1524803_26	NF012014	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524803_28	UniRef90_UPI001D0975F6	100.0	1.02e-24	N/A	N/A
UniRef90	UHGV-1524803_29	UniRef90_A0A8D9PGN2	182.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1524803_29	1232453.BAIF02000058_gene1634	54.3	0.0000004	N/A	N/A
structural_annotation	UHGV-1524803_29	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524803_30	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_31	phrog_5	52.4	0.000000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-1524803_31	UniRef90_UPI001BBD4500	125.0	3.19e-33	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1524803_31	397290.C810_01411	129.0	2.28e-35	N/A	N/A
Pfam	UHGV-1524803_31	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1524803_31	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1524803_31	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524803_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_33	phrog_1129	73.3	2e-21	holin	lysis
UniRef90	UHGV-1524803_33	UniRef90_A0A8D9UII9	130.0	8.68e-38	Holin	N/A
eggNOG-mapper	UHGV-1524803_33	411461.DORFOR_00721	98.2	1.21e-25	N/A	N/A
Pfam	UHGV-1524803_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1524803_33	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_34	phrog_1863	55.3	4.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1524803_34	1232452.BAIB02000007_gene1606	70.1	0.0000000000000442	N/A	N/A
UniRef90	UHGV-1524803_35	UniRef90_UPI000836E88E	51.6	0.00000393	phage head-tail connector protein	N/A
UniRef90	UHGV-1524803_36	UniRef90_A0A416G2T8	60.5	0.000000000269	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1524803_36	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_37	phrog_29	174.3	0	major head protein	head and packaging
UniRef90	UHGV-1524803_37	UniRef90_A0A1C5WIT9	592.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1524803_37	1347368.HG964404_gene4993	159.0	5.57717e-43	Phage major capsid protein E	N/A
Pfam	UHGV-1524803_37	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1524803_37	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_38	phrog_909	77.3	1.5e-22	major head protein	head and packaging
UniRef90	UHGV-1524803_38	UniRef90_R7BGI8	193.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1524803_38	1536772.R70723_06665	58.5	0.00000000142	N/A	N/A
PHROG	UHGV-1524803_40	phrog_2742	81.0	1.6e-23	endolysin	lysis
UniRef90	UHGV-1524803_40	UniRef90_A0A173ZHV9	705.0	0	Clostridial hydrophobic W	N/A
eggNOG-mapper	UHGV-1524803_40	411462.DORLON_00764	255.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1524803_40	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1524803_40	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-1524803_40	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1524803_40	PF01520,TIGR02883,COG5492,COG0860	N/A	N/A	N/A	N/A
COG	UHGV-1524803_41	COG3204	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_43	phrog_64	139.4	1.99993e-41	portal protein	head and packaging
UniRef90	UHGV-1524803_43	UniRef90_R6CA99	558.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1524803_43	1298920.KI911353_gene2663	425.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1524803_43	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1524803_43	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_44	phrog_36	59.0	9.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524803_44	UniRef90_A0A7C6JU72	70.1	0.00000000000171	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_44	397290.C810_01391	89.4	9.33e-21	N/A	N/A
Pfam	UHGV-1524803_44	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1524803_44	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_45	phrog_38	169.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1524803_45	UniRef90_A0A318EQM2	521.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1524803_45	1123263.AUKY01000015_gene1608	327.0	0	chromosome segregation	N/A
COG	UHGV-1524803_45	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524803_45	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_49	phrog_355	58.9	7.2e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524803_49	UniRef90_UPI000CFA6BAA	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-1524803_49	97138.C820_00250	132.0	1.18e-38	N/A	N/A
Pfam	UHGV-1524803_49	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1524803_49	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524803_50	PF13069	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524803_54	PF06004,NF033216,COG4568	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_56	397290.C810_01353	152.0	1.37327e-43	N/A	N/A
eggNOG-mapper	UHGV-1524803_57	397287.C807_02568	101.0	1.1e-27	N/A	N/A
AcrCatalog	UHGV-1524803_57	cluster_18515	37.4	0.0000008	NA	N/A
KOfam	UHGV-1524803_58	K06218	69.3	1.2e-19	relE, stbE; mRNA interferase RelE/StbE	N/A
PHROG	UHGV-1524803_58	phrog_1213	73.1	3.8e-21	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1524803_58	UniRef90_A0A413TY98	152.0	0	Type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-1524803_58	1235793.C809_03093	135.0	8.88998e-41	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-1524803_58	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-1524803_58	COG2026	N/A	N/A	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	N/A
structural_annotation	UHGV-1524803_58	PF05016,TIGR00053,COG2026	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_59	phrog_31631	42.9	0.0000000000057	N/A	unknown function
eggNOG-mapper	UHGV-1524803_59	658655.HMPREF0988_00903	46.2	0.00000664	N/A	N/A
eggNOG-mapper	UHGV-1524803_61	397290.C810_01347	45.8	0.00000914	N/A	N/A
structural_annotation	UHGV-1524803_61	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_64	phrog_373	63.7	2.3e-19	anti-repressor	transcription regulation
UniRef90	UHGV-1524803_64	UniRef90_R9K3E2	108.0	5.92e-26	Rha family phage regulatory protein	N/A
eggNOG-mapper	UHGV-1524803_64	1235792.C808_03051	108.0	9.94e-27	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1524803_64	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1524803_64	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1524803_64	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1524803_64	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524803_66	UniRef90_UPI001106069C	71.6	0.00000000000000222	ribbon-helix-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_66	1235793.C809_02220	73.6	6.58e-17	N/A	N/A
structural_annotation	UHGV-1524803_66	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_68	1235800.C819_00492	71.2	6.28e-16	N/A	N/A
structural_annotation	UHGV-1524803_68	PF01402,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524803_69	UniRef90_A0A832RJS1	53.5	0.0000000765	LITAF domain-containing protein	N/A
structural_annotation	UHGV-1524803_69	TIGR04165,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_70	phrog_130	189.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1524803_70	UniRef90_A0A317UAG4	367.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1524803_70	658655.HMPREF0988_00912	337.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1524803_70	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1524803_70	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1524803_70	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1524803_70	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_71	397290.C810_01336	105.0	3e-28	N/A	N/A
eggNOG-mapper	UHGV-1524803_72	658655.HMPREF0988_00915	120.0	9.8e-31	N/A	N/A
PHROG	UHGV-1524803_73	phrog_20016	197.7	0	N/A	unknown function
UniRef90	UHGV-1524803_73	UniRef90_A0A285PT46	164.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1524803_73	397290.C810_05214	174.0	0	N/A	N/A
structural_annotation	UHGV-1524803_73	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1524803_74	phrog_16490	161.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1524803_74	397290.C810_01328	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-1524803_75	658655.HMPREF0988_00918	63.9	0.00000000000139	N/A	N/A
eggNOG-mapper	UHGV-1524803_76	658655.HMPREF0988_00919	105.0	1.12e-26	N/A	N/A
structural_annotation	UHGV-1524803_76	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524803_77	658655.HMPREF0988_00920	47.0	0.00000216	N/A	N/A
UniRef90	UHGV-1524803_78	UniRef90_A0A6N3CTR7	48.1	0.00000349	MATE family multidrug exporter	N/A
eggNOG-mapper	UHGV-1524803_78	411462.DORLON_01434	62.4	0.0000000000598	COG COG0534 Na -driven multidrug efflux pump	N/A
COG	UHGV-1524803_78	COG0534	N/A	N/A	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	N/A
eggNOG-mapper	UHGV-1524803_79	500632.CLONEX_00023	89.0	1.5e-21	N/A	N/A
eggNOG-mapper	UHGV-1524803_80	411462.DORLON_01432	154.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1524803	Yes	49,158	37	84	1
UHGV-1446789	No	44,857	37	77	1
UHGV-0189268	No	24,134	37	41	1
UHGV-2055140	No	13,821	37	24	1
UHGV-1693647	No	12,912	36	22	1