vOTU vOTU-018524

vOTU: vOTU-018524

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018524
Number of genomes	5
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00302 → vOTU-018524
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1481242
Biosample ID	SAMN03418276
Genome length (bp)	29,814 bps
CheckV completeness	74.99% (Medium-quality)
CDS count	56
CDS density	94.72%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	107	Host agreement	93.46
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1481242_1	PF21715,MF_01804,TIGR00281,COG1386	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_3	phrog_253	82.3	6.6e-24	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_3	UniRef90_A0A8D9PDS3	165.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-1481242_3	411470.RUMGNA_02192	126.0	7.42e-35	Siphovirus Gp157	N/A
Pfam	UHGV-1481242_3	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1481242_3	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_4	phrog_7838	148.8	3.64338e-44	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_4	UniRef90_A0A8D9UGW3	277.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1481242_4	742767.HMPREF9456_02052	188.0	0	N/A	N/A
structural_annotation	UHGV-1481242_4	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_5	phrog_72	56.2	5e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_5	UniRef90_A0A2Z4Q9W9	118.0	1.9e-30	NinB	N/A
eggNOG-mapper	UHGV-1481242_5	1507.HMPREF0262_00432	121.0	2.06e-32	N/A	N/A
structural_annotation	UHGV-1481242_5	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_6	phrog_374	181.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_6	UniRef90_A0A7W0C2S3	184.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-1481242_6	411462.DORLON_00791	172.0	0	N/A	N/A
structural_annotation	UHGV-1481242_6	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-1481242_7	K07451	45.9	0.000000000001	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1481242_7	phrog_7370	64.5	1.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_7	UniRef90_R5XZW2	127.0	2.5e-36	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1481242_7	1123058.KB894266_gene1536	56.6	0.0000000617	HNH endonuclease	N/A
Pfam	UHGV-1481242_7	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1481242_7	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1481242_9	K03111	154.6	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1481242_9	phrog_44	158.6	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_9	UniRef90_R5SNS5	193.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1481242_9	1519439.JPJG01000082_gene432	187.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1481242_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1481242_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1481242_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1481242_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1481242_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_11	phrog_15768	120.9	6.8e-37	N/A	unknown function
UniRef90	UHGV-1481242_11	UniRef90_A0A8D9PDU3	142.0	3.97e-39	N/A	N/A
eggNOG-mapper	UHGV-1481242_11	203119.Cthe_2466	98.6	1.45e-21	N/A	N/A
AcrCatalog	UHGV-1481242_11	cluster_38323	92.0	1.26e-24	NA	N/A
Pfam	UHGV-1481242_11	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1481242_11	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1481242_12	K02315	131.7	7.2e-39	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1481242_12	phrog_50	128.0	8.5e-38	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_12	UniRef90_A0A810Q3X8	292.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1481242_12	1507.HMPREF0262_00302	187.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-1481242_12	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1481242_12	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1481242_12	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_13	phrog_59	116.7	1.3e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_13	UniRef90_A0A139QI12	117.0	1.96e-30	HNH homing endonuclease	N/A
eggNOG-mapper	UHGV-1481242_13	1423814.HMPREF0549_1779	105.0	1.42e-25	NUMOD4 motif	N/A
PADLOC	UHGV-1481242_13	HEase_00016	105.0	7.1e-31	homing endonuclease	RM
Pfam	UHGV-1481242_13	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1481242_13	PF13392	N/A	N/A	HNH endonuclease	HNH_3
KOfam	UHGV-1481242_14	K00558	67.3	4.3e-25	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1481242_14	phrog_17284	160.6	0	N/A	unknown function
UniRef90	UHGV-1481242_14	UniRef90_A0A1Q6JM75	547.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1481242_14	1235797.C816_01614	437.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-1481242_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1481242_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1481242_14	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_16	phrog_38832	62.2	5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1481242_16	665956.HMPREF1032_00143	64.7	0.0000000000908	N/A	N/A
structural_annotation	UHGV-1481242_16	PF11717,TIGR02450	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_17	PF14354	N/A	N/A	N/A	N/A
COG	UHGV-1481242_19	COG3582	N/A	N/A	CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity)	N/A
PHROG	UHGV-1481242_22	phrog_190	123.3	1.6e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_22	UniRef90_UPI0005288167	125.0	6.67e-35	N/A	N/A
eggNOG-mapper	UHGV-1481242_22	1121105.ATXL01000006_gene1363	98.2	1.92e-24	N/A	N/A
Pfam	UHGV-1481242_22	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1481242_22	PF06356	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_25	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_26	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-1481242_27	K00571	104.6	1.3e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1481242_27	phrog_67	97.8	2.4e-29	DNA methyltransferase	other
UniRef90	UHGV-1481242_27	UniRef90_A0A1C6E5W1	485.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1481242_27	910314.HMPREF9220_0636	377.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1481242_27	MTase_II_00157	82.9	5.6e-25	Type II methyltransferase	RM
Pfam	UHGV-1481242_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1481242_27	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1481242_27	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
Pfam	UHGV-1481242_28	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
COG	UHGV-1481242_28	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-1481242_29	phrog_606	81.0	1.5e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1481242_29	UniRef90_UPI00195648BB	172.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1481242_29	397290.C810_05185	146.0	1.17008e-42	DNA-packaging protein gp3	N/A
Pfam	UHGV-1481242_29	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1481242_29	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1481242_30	K06909	143.3	2.29953e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1481242_30	phrog_10250	178.1	0	N/A	unknown function
UniRef90	UHGV-1481242_30	UniRef90_A0A8J6MB41	499.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1481242_30	1226322.HMPREF1545_00043	432.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1481242_30	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1481242_30	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1481242_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1481242_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1481242_30	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_31	phrog_64	161.6	0	portal protein	head and packaging
UniRef90	UHGV-1481242_31	UniRef90_UPI0018A8A301	595.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1481242_31	1235800.C819_02239	86.3	0.00000000000000299	phage portal protein, SPP1	N/A
Pfam	UHGV-1481242_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1481242_31	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_32	phrog_115	115.4	2.2e-34	minor head protein	head and packaging
UniRef90	UHGV-1481242_32	UniRef90_A0A810PSD3	589.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1481242_32	1111121.HMPREF1247_0797	188.0	0	cell adhesion	N/A
Pfam	UHGV-1481242_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1481242_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1481242_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_32	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_33	phrog_5	70.2	3.5e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1481242_33	UniRef90_A0A4D7AJK9	196.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1481242_33	929506.CbC4_1219	97.8	3.44e-24	N/A	N/A
Pfam	UHGV-1481242_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1481242_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_35	PF18152	N/A	N/A	N/A	N/A
Pfam	UHGV-1481242_37	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-1481242_37	PF03869,NF010256	N/A	N/A	N/A	N/A
UniRef90	UHGV-1481242_38	UniRef90_A0A6B9SU02	78.6	0.0000000000000169	Fibronectin autolysin	N/A
structural_annotation	UHGV-1481242_38	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_39	phrog_544	178.1	0	major head protein	head and packaging
UniRef90	UHGV-1481242_39	UniRef90_A0A810PZM2	719.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1481242_39	1232453.BAIF02000011_gene3359	272.0	0	N/A	N/A
Pfam	UHGV-1481242_39	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1481242_39	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_41	phrog_17977	73.6	1.9e-21	N/A	unknown function
UniRef90	UHGV-1481242_41	UniRef90_UPI00141211AB	90.5	3.97e-21	head-tail adaptor protein	N/A
structural_annotation	UHGV-1481242_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_42	phrog_99	113.1	2.5e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1481242_42	UniRef90_A0A352Q2W8	84.3	2.19e-17	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1481242_42	272943.RSP_6243	74.7	0.0000000000000125	PFAM Pathogenesis-related transcriptional factor and ERF protein	N/A
structural_annotation	UHGV-1481242_42	PF00847,PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_43	phrog_17405	40.8	0.000000000034	head protein	head and packaging
structural_annotation	UHGV-1481242_43	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_44	phrog_885	80.1	2.3e-23	major tail protein	tail
UniRef90	UHGV-1481242_44	UniRef90_A0A843J9F0	201.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1481242_44	1504822.CCNO01000012_gene492	238.0	0	N/A	N/A
structural_annotation	UHGV-1481242_44	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1481242_45	UniRef90_A0A285PXU7	70.9	0.000000000000422	Consensus disorder prediction	N/A
PHROG	UHGV-1481242_47	phrog_6900	272.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1481242_47	UniRef90_A0A3D0EFB4	233.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1481242_47	536233.CLO_1577	300.0	0	tape measure	N/A
COG	UHGV-1481242_47	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1481242_47	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_48	phrog_1194	45.0	0.0000000000018	N/A	unknown function
structural_annotation	UHGV-1481242_48	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_49	phrog_32744	543.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1481242_49	1120998.AUFC01000030_gene2247	251.0	0	N/A	N/A
structural_annotation	UHGV-1481242_49	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1481242_51	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1481242_52	phrog_31538	41.0	0.000000000035	N/A	unknown function
PHROG	UHGV-1481242_53	phrog_13589	187.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1481242_53	742733.HMPREF9469_05009	229.0	0	N/A	N/A
PHROG	UHGV-1481242_55	phrog_937	46.8	0.00000000000051	hemolysin	other
eggNOG-mapper	UHGV-1481242_55	1519439.JPJG01000023_gene533	66.2	0.000000000000843	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1481242	Yes	29,814	53	75	1
UHGV-0196198	No	18,793	53	47	1
UHGV-0135911	No	18,278	52	46	1
UHGV-1346948	No	11,463	53	29	1
UHGV-1985218	No	10,729	52	27	1