vOTU vOTU-018578

vOTU: vOTU-018578

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018578
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Butyricicoccaceae → Butyricicoccus_A → Butyricicoccus_A sp002395695
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00116 → vOTU-018578
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019159
Biosample ID	SAMEA4766007
Genome length (bp)	37,021 bps
CheckV completeness	87.11% (Medium-quality)
CDS count	66
CDS density	94.17%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	79	Host agreement	97.47
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Butyricicoccaceae → Butyricicoccus_A → Butyricicoccus_A sp002395695	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0019159_3	phrog_38832	89.4	2.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0019159_3	665956.HMPREF1032_03087	73.2	0.000000000000046	N/A	N/A
structural_annotation	UHGV-0019159_3	PF11717,TIGR02450	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_4	PF12092	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_5	phrog_2118	99.8	3.4e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019159_5	UniRef90_A0A417HX51	199.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0019159_5	1511.CLOST_1546	117.0	2.8e-32	HNH endonuclease	N/A
Pfam	UHGV-0019159_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0019159_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0019159_5	TIGR02646,COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-0019159_8	K19779	42.8	0.0000000000071	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0019159_8	phrog_599	49.3	0.0000000000001	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0019159_8	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0019159_8	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0019159_8	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
COG	UHGV-0019159_8	COG1601	N/A	N/A	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	N/A
structural_annotation	UHGV-0019159_8	PF14354,NF007260	N/A	N/A	N/A	N/A
Pfam	UHGV-0019159_10	PF01355	N/A	N/A	High potential iron-sulfur protein	HIPIP
UniRef90	UHGV-0019159_11	UniRef90_UPI0019D1E2CF	252.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0019159_11	1410632.JHWW01000006_gene695	196.0	0	N/A	N/A
structural_annotation	UHGV-0019159_11	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_13	phrog_1770	51.3	0.000000000000023	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0019159_13	536233.CLO_1822	145.0	3.08986e-42	N/A	N/A
structural_annotation	UHGV-0019159_13	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-0019159_16	K01520	151.8	4.2039e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0019159_16	phrog_135	139.0	2.20004e-41	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019159_16	UniRef90_A0A3D3Y5Q7	249.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0019159_16	887929.HMP0721_1278	138.0	2.65e-40	dUTPase	N/A
Pfam	UHGV-0019159_16	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0019159_16	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0019159_16	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0019159_16	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019159_17	742738.HMPREF9460_02503	92.0	6.75e-23	N/A	N/A
structural_annotation	UHGV-0019159_17	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_18	phrog_2657	114.6	5.2e-34	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019159_18	UniRef90_A5MYL4	232.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0019159_18	431943.CKL_1850	232.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0019159_18	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0019159_18	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0019159_18	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0019159_18	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019159_19	UniRef90_UPI00164C5C54	153.0	1.4013e-45	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0019159_19	1226322.HMPREF1545_00042	134.0	1.48e-38	N/A	N/A
structural_annotation	UHGV-0019159_19	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0019159_20	K06909	375.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0019159_20	phrog_3717	158.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0019159_20	UniRef90_A0A2U1BEH4	716.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0019159_20	1123511.KB905868_gene187	469.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0019159_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0019159_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0019159_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0019159_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0019159_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_21	phrog_533	357.4	0	portal protein	head and packaging
UniRef90	UHGV-0019159_21	UniRef90_UPI0006C81717	696.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0019159_21	1226322.HMPREF1545_00044	607.0	0	N/A	N/A
Pfam	UHGV-0019159_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0019159_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_22	phrog_581	287.6	0	minor head protein	head and packaging
UniRef90	UHGV-0019159_22	UniRef90_A0A1C5N7V1	484.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0019159_22	1226322.HMPREF1545_00046	381.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0019159_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0019159_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_23	phrog_34144	44.3	0.0000000000021	N/A	unknown function
UniRef90	UHGV-0019159_23	UniRef90_R6AQU3	74.3	5.57e-16	Conserved protein	N/A
eggNOG-mapper	UHGV-0019159_23	1064535.MELS_1696	89.7	1.12e-22	N/A	N/A
structural_annotation	UHGV-0019159_23	PF20111	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_24	phrog_2303	52.4	0.0000000000000071	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0019159_24	1226322.HMPREF1545_00049	165.0	0	N/A	N/A
PHROG	UHGV-0019159_25	phrog_10	163.2	0	major head protein	head and packaging
UniRef90	UHGV-0019159_25	UniRef90_A0A2U1BEF2	517.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0019159_25	1226322.HMPREF1545_00050	487.0	0	Phage capsid family	N/A
Pfam	UHGV-0019159_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0019159_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0019159_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0019159_25	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_26	phrog_541	100.0	1.5e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0019159_26	642492.Clole_0822	62.4	0.000000000174	N/A	N/A
PHROG	UHGV-0019159_27	phrog_3366	104.6	7.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0019159_27	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-0019159_27	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0019159_27	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_28	phrog_556	70.1	2.8e-20	minor head protein	head and packaging
UniRef90	UHGV-0019159_28	UniRef90_UPI00195E1497	211.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0019159_28	1226322.HMPREF1545_00054	164.0	0	Minor capsid protein	N/A
Pfam	UHGV-0019159_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0019159_28	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_29	phrog_3266	48.8	0.000000000000092	tail completion	connector
eggNOG-mapper	UHGV-0019159_29	1232443.BAIA02000078_gene24	161.0	0	N/A	N/A
structural_annotation	UHGV-0019159_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_30	phrog_3099	78.1	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0019159_30	693746.OBV_18150	202.0	0	N/A	N/A
structural_annotation	UHGV-0019159_30	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_31	phrog_11299	65.2	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0019159_31	693746.OBV_18160	159.0	0	N/A	N/A
structural_annotation	UHGV-0019159_31	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_32	phrog_706	130.2	1.4e-38	N/A	unknown function
UniRef90	UHGV-0019159_32	UniRef90_UPI000682A80B	221.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0019159_32	693746.OBV_18170	207.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0019159_32	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0019159_32	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_33	phrog_1535	117.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0019159_33	UniRef90_A0A810PX76	234.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0019159_33	1235797.C816_04182	406.0	0	SLT domain	N/A
COG	UHGV-0019159_33	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_34	phrog_1194	74.0	1.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0019159_34	411902.CLOBOL_00125	115.0	2.23e-31	N/A	N/A
structural_annotation	UHGV-0019159_34	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_35	phrog_13879	239.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0019159_35	1226322.HMPREF1545_00061	353.0	0	N/A	N/A
structural_annotation	UHGV-0019159_35	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_36	phrog_18725	56.0	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0019159_36	1226322.HMPREF1545_00062	83.6	4.59e-18	N/A	N/A
structural_annotation	UHGV-0019159_37	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_38	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019159_39	428125.CLOLEP_01433	52.8	0.0000000786	N/A	N/A
PHROG	UHGV-0019159_40	phrog_13589	149.0	2.38221e-44	N/A	unknown function
eggNOG-mapper	UHGV-0019159_40	742733.HMPREF9469_05009	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019159_41	428125.CLOLEP_01435	53.1	0.00000122	N/A	N/A
PHROG	UHGV-0019159_42	phrog_37900	79.9	4.3e-25	N/A	unknown function
UniRef90	UHGV-0019159_42	UniRef90_UPI00051B4A1C	289.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019159_42	1519439.JPJG01000060_gene1894	289.0	0	N/A	N/A
Pfam	UHGV-0019159_42	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0019159_42	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0019159_42	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_43	phrog_10993	227.6	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0019159_43	UniRef90_UPI00082CBED4	257.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019159_43	1121334.KB911071_gene1970	201.0	0	N/A	N/A
Pfam	UHGV-0019159_43	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0019159_43	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019159_44	1235797.C816_04174	115.0	6.32e-30	N/A	N/A
PHROG	UHGV-0019159_45	phrog_937	53.0	0.0000000000000067	hemolysin	other
PHROG	UHGV-0019159_47	phrog_13256	62.6	3.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0019159_47	428125.CLOLEP_01907	73.6	1.83e-16	N/A	N/A
UniRef90	UHGV-0019159_48	UniRef90_UPI00164EA432	217.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019159_48	525254.HMPREF0072_1273	207.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0019159_48	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0019159_48	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_49	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_50	phrog_3754	102.9	2.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0019159_50	476272.RUMHYD_01764	168.0	0	N/A	N/A
PHROG	UHGV-0019159_51	phrog_21718	103.1	2.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0019159_51	476272.RUMHYD_01768	56.2	0.0000000771	N/A	N/A
PHROG	UHGV-0019159_52	phrog_22984	75.4	1.1e-22	N/A	unknown function
PHROG	UHGV-0019159_53	phrog_16490	159.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0019159_53	397290.C810_05212	99.4	6.89e-22	N/A	N/A
PHROG	UHGV-0019159_54	phrog_20016	176.1	0	N/A	unknown function
UniRef90	UHGV-0019159_54	UniRef90_A0A285PT46	178.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0019159_54	1226322.HMPREF1545_00077	158.0	0	N/A	N/A
structural_annotation	UHGV-0019159_54	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_55	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019159_56	1226322.HMPREF1545_00079	112.0	8.48e-31	N/A	N/A
KOfam	UHGV-0019159_57	K14059	155.0	1.4013e-45	int; integrase	N/A
PHROG	UHGV-0019159_57	phrog_1	151.8	5.60519e-45	integrase	integration and excision
UniRef90	UHGV-0019159_57	UniRef90_A0A3D3Y5E0	608.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0019159_57	445972.ANACOL_01797	307.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0019159_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0019159_57	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0019159_57	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0019159_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0019159_58	PF12844	N/A	N/A	N/A	N/A
PHROG	UHGV-0019159_60	phrog_10292	62.9	3.3e-18	N/A	unknown function
UniRef90	UHGV-0019159_60	UniRef90_UPI0009DE3FE8	164.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019159_60	665956.HMPREF1032_00562	147.0	4.76441e-44	TM2 domain	N/A
Pfam	UHGV-0019159_60	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0019159_60	COG2314	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019159_60	PF05154,PF12773,MF_00788,NF003161	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019159_61	477974.Daud_0794	72.4	0.00000000000152	PFAM nuclease (SNase	N/A
Pfam	UHGV-0019159_61	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-0019159_61	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
KOfam	UHGV-0019159_62	K22300	62.5	9.8e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0019159_62	phrog_8	53.0	0.000000000000006	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019159_62	UniRef90_A0A2U1BEG8	117.0	1.55e-31	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0019159_62	1235793.C809_03587	107.0	3.11e-28	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0019159_62	retron_type_VI_hth_cluster2_1	40.5	0.000000000056	N/A	Retron
Pfam	UHGV-0019159_62	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0019159_62	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019159_62	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0019159	Yes	37,021	52	87	1
UHGV-1348751	No	32,972	52	78	1
UHGV-0132523	No	30,457	53	72	1
UHGV-1387642	No	30,457	53	72	1
UHGV-0333482	No	20,774	52	49	1
UHGV-0201523	No	20,034	52	47	1