vOTU vOTU-018973

vOTU: vOTU-018973

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018973
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vOTU-018973
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1334502
Biosample ID	SAMN00792088
Genome length (bp)	27,431 bps
CheckV completeness	72.35% (Medium-quality)
CDS count	34
CDS density	93.14%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	741	Host agreement	98.25
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	1002	Host agreement	90.22

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1334502_1	phrog_10226	75.4	6.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1334502_1	431943.CKL_3226	100.0	2.76e-22	N/A	N/A
KOfam	UHGV-1334502_4	K07474	155.0	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1334502_4	phrog_51	155.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-1334502_4	UniRef90_A0A356C6K0	361.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1334502_4	1499683.CCFF01000014_gene3916	185.0	0	Terminase small subunit	N/A
Pfam	UHGV-1334502_4	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1334502_4	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1334502_4	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1334502_5	K06909	101.5	1.1e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1334502_5	phrog_2	76.4	6e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1334502_5	UniRef90_A0A413YU24	900.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1334502_5	1391647.AVSV01000003_gene1802	513.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1334502_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1334502_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1334502_5	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_6	phrog_533	277.1	0	portal protein	head and packaging
UniRef90	UHGV-1334502_6	UniRef90_A0A3D5LTG9	937.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1334502_6	33035.JPJF01000093_gene2257	561.0	0	N/A	N/A
structural_annotation	UHGV-1334502_6	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_7	phrog_581	234.9	0	minor head protein	head and packaging
UniRef90	UHGV-1334502_7	UniRef90_A0A413YU28	631.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1334502_7	33035.JPJF01000093_gene2255	436.0	0	N/A	N/A
Pfam	UHGV-1334502_7	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1334502_7	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1334502_7	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_9	phrog_872	180.9	0	N/A	unknown function
UniRef90	UHGV-1334502_9	UniRef90_A0A413P9Z7	308.0	0	N/A	N/A
eggNOG-mapper	UHGV-1334502_9	749222.Nitsa_1194	168.0	0	N/A	N/A
Pfam	UHGV-1334502_9	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1334502_9	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1334502_9	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_10	phrog_2303	135.2	5.1e-40	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1334502_10	483218.BACPEC_01156	139.0	2.87e-38	N/A	N/A
PHROG	UHGV-1334502_11	phrog_422	258.3	0	major head protein	head and packaging
UniRef90	UHGV-1334502_11	UniRef90_A0A3D5M0U8	499.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1334502_11	445972.ANACOL_01845	375.0	0	N/A	N/A
structural_annotation	UHGV-1334502_11	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_12	phrog_541	67.4	2.4e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1334502_12	483218.BACPEC_01153	145.0	1.44334e-43	N/A	N/A
PHROG	UHGV-1334502_13	phrog_8710	134.4	3.7e-40	N/A	unknown function
eggNOG-mapper	UHGV-1334502_13	742740.HMPREF9474_03508	125.0	7.06e-36	N/A	N/A
structural_annotation	UHGV-1334502_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_14	phrog_556	60.5	2.6e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1334502_14	742740.HMPREF9474_03509	138.0	2.9e-40	N/A	N/A
structural_annotation	UHGV-1334502_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_15	phrog_2595	90.4	1.8e-26	head-tail connector protein	connector
UniRef90	UHGV-1334502_15	UniRef90_UPI001D068DAC	143.0	1.93001e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-1334502_15	742740.HMPREF9474_03510	130.0	2.35e-37	N/A	N/A
Pfam	UHGV-1334502_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1334502_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_16	phrog_820	112.8	2.3e-33	major tail protein	tail
UniRef90	UHGV-1334502_16	UniRef90_T3DDR1	180.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1334502_16	1151292.QEW_2426	180.0	0	N/A	N/A
structural_annotation	UHGV-1334502_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_17	phrog_8300	69.5	4.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1334502_17	1151292.QEW_2425	68.6	0.000000000000168	N/A	N/A
structural_annotation	UHGV-1334502_17	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_18	phrog_8355	101.2	4e-30	N/A	unknown function
UniRef90	UHGV-1334502_18	UniRef90_UPI0006BBA9AA	120.0	2.89e-33	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1334502_18	394503.Ccel_3036	101.0	3.17e-26	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1334502_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1334502_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_19	phrog_1535	276.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1334502_19	UniRef90_A0A1C5PIN9	516.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1334502_19	33035.JPJF01000093_gene2243	400.0	0	phage tail tape measure protein	N/A
COG	UHGV-1334502_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1334502_19	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_20	phrog_1194	52.6	0.0000000000000075	N/A	unknown function
eggNOG-mapper	UHGV-1334502_20	33035.JPJF01000093_gene2242	84.3	3.04e-20	N/A	N/A
UniRef90	UHGV-1334502_21	UniRef90_A0A0U2MXI4	92.4	5.93e-18	Peptidase_C39_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1334502_21	411461.DORFOR_02049	758.0	0	N/A	N/A
eggNOG-mapper	UHGV-1334502_22	411461.DORFOR_02050	224.0	0	N/A	N/A
UniRef90	UHGV-1334502_23	UniRef90_B0G6R7	558.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1334502_23	411461.DORFOR_02051	558.0	0	COG NOG21982 non supervised orthologous group	N/A
Pfam	UHGV-1334502_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1334502_23	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
eggNOG-mapper	UHGV-1334502_24	411470.RUMGNA_03135	218.0	0	N/A	N/A
KOfam	UHGV-1334502_25	K07467	332.1	0	nicK; putative DNA relaxase	N/A
PHROG	UHGV-1334502_25	phrog_453	71.8	3.1e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334502_25	UniRef90_A7B6C1	746.0	0	Rol_Rep_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1334502_25	411461.DORFOR_02053	747.0	0	N/A	N/A
Pfam	UHGV-1334502_25	PF18106	N/A	N/A	Rolling Circle replication initiation protein N-terminal domain	Rol_Rep_N
Pfam	UHGV-1334502_25	PF02486	N/A	N/A	Replication initiation factor	Rep_trans
COG	UHGV-1334502_25	COG2946	N/A	N/A	DNA relaxase NicK	N/A
structural_annotation	UHGV-1334502_25	PF02486,PF18106,MF_00408,NF041493,COG2946	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_26	phrog_7338	46.5	0.00000000000062	N/A	unknown function
UniRef90	UHGV-1334502_26	UniRef90_R5DU66	151.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-1334502_26	411470.RUMGNA_03133	124.0	1.15e-36	Helix-turn-helix domain	N/A
Pfam	UHGV-1334502_26	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1334502_26	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
KOfam	UHGV-1334502_27	K14059	288.1	0	int; integrase	N/A
PHROG	UHGV-1334502_27	phrog_1	240.6	0	integrase	integration and excision
UniRef90	UHGV-1334502_27	UniRef90_A0A174EMX0	808.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1334502_27	411461.DORFOR_02055	778.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1334502_27	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1334502_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1334502_27	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1334502_27	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1334502_28	33035.JPJF01000093_gene2242	85.1	8.48e-21	N/A	N/A
PHROG	UHGV-1334502_29	phrog_1401	57.4	2.6e-16	N/A	unknown function
UniRef90	UHGV-1334502_29	UniRef90_UPI00077668B1	65.9	0.0000000000339	N/A	N/A
eggNOG-mapper	UHGV-1334502_29	1391647.AVSV01000003_gene1820	77.8	1.31e-16	N/A	N/A
structural_annotation	UHGV-1334502_29	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_30	phrog_6616	151.1	0	tail protein	tail
UniRef90	UHGV-1334502_30	UniRef90_UPI00083903F4	89.0	0.00000000000000607	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-1334502_30	1232453.BAIF02000058_gene1641	216.0	0	Phage minor structural protein	N/A
COG	UHGV-1334502_30	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1334502_30	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1334502_31	phrog_16267	71.3	1.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1334502_31	1262449.CP6013_3213	106.0	1.44e-22	Phage minor structural protein	N/A
COG	UHGV-1334502_31	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-1334502_32	phrog_1980	50.3	0.000000000000028	tail fiber protein	tail
eggNOG-mapper	UHGV-1334502_32	754059.M1PRW7_9CAUD	61.6	0.000000346	outer membrane	N/A
Pfam	UHGV-1334502_32	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-1334502_33	phrog_199	73.6	2.6e-21	holin	lysis
UniRef90	UHGV-1334502_33	UniRef90_A0A356C4Q2	242.0	0	Holin	N/A
eggNOG-mapper	UHGV-1334502_33	483218.BACPEC_01140	217.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1334502_33	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1334502_33	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1334502_33	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1334502_33	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1334502_34	K07273	119.9	3.1e-35	acm; lysozyme	N/A
PHROG	UHGV-1334502_34	phrog_291	97.5	2e-28	endolysin	lysis
UniRef90	UHGV-1334502_34	UniRef90_A0A356C4L5	753.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1334502_34	515620.EUBELI_01316	166.0	2.8026e-45	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-1334502_34	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1334502_34	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1334502_34	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1334502	Yes	27,431	38	72	1
UHGV-0124324	No	16,153	39	42	1
UHGV-1569643	No	16,153	39	42	1
UHGV-1701075	No	14,486	39	38	1
UHGV-1620463	No	10,492	38	27	1