vOTU vOTU-018998

vOTU: vOTU-018998

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-018998
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → An92 → An92 sp900199495
Taxonomy (UHGV)	vFAM-00005 → vOTU-018998
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → An92 → An92 sp900199495
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1357199
Biosample ID	SAMN07646519
Genome length (bp)	36,406 bps
CheckV completeness	85.14% (Medium-quality)
CDS count	40
CDS density	94.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → An92 → An92 sp900199495	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → An92 → An92 sp900199495	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1357199_1	phrog_309	122.3	2.3e-36	terminase small subunit	head and packaging
UniRef90	UHGV-1357199_1	UniRef90_UPI00100A781C	129.0	1.42e-34	transposase	N/A
eggNOG-mapper	UHGV-1357199_1	469618.FVAG_00793	125.0	9.92e-34	transposase activity	N/A
COG	UHGV-1357199_1	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1357199_1	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_3	K06909	106.9	2.1e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1357199_3	phrog_979	191.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1357199_3	UniRef90_UPI001D0245C4	756.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1357199_3	411483.FAEPRAA2165_01044	647.0	0	Terminase-like family	N/A
Pfam	UHGV-1357199_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1357199_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1357199_3	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_4	phrog_156	317.4	0	portal protein	head and packaging
UniRef90	UHGV-1357199_4	UniRef90_A0A8D9UH10	590.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1357199_4	748224.HMPREF9436_01396	496.0	0	N/A	N/A
structural_annotation	UHGV-1357199_4	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_5	K07584	47.9	0.00000000000023	N/A	N/A
PHROG	UHGV-1357199_5	phrog_4478	47.3	0.00000000000026	peptidase	other
UniRef90	UHGV-1357199_5	UniRef90_A0A7X8Z6F3	56.2	0.000000064	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1357199_5	1229517.AMFD01000023_gene1317	51.2	0.000000569	Pfam:Peptidase_C108	N/A
Pfam	UHGV-1357199_5	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1357199_5	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357199_5	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_6	phrog_13908	284.3	0	N/A	unknown function
UniRef90	UHGV-1357199_6	UniRef90_UPI0012DFC3C8	107.0	8.03e-23	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1357199_6	1203606.HMPREF1526_02747	63.5	0.00000000506	N/A	N/A
PHROG	UHGV-1357199_7	phrog_1357	279.2	0	major head protein	head and packaging
UniRef90	UHGV-1357199_7	UniRef90_UPI0019599E86	533.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1357199_7	1203606.HMPREF1526_02746	377.0	0	N/A	N/A
Pfam	UHGV-1357199_7	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1357199_7	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1357199_7	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_8	phrog_15239	68.0	1.1e-19	N/A	unknown function
PHROG	UHGV-1357199_10	phrog_27545	185.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1357199_10	742738.HMPREF9460_00363	208.0	0	N/A	N/A
PHROG	UHGV-1357199_11	phrog_12105	93.9	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1357199_11	1226322.HMPREF1545_03850	50.8	0.0000027	N/A	N/A
PHROG	UHGV-1357199_12	phrog_511	180.9	0	internal virion protein	head and packaging
UniRef90	UHGV-1357199_12	UniRef90_A0A8D9UH72	333.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1357199_12	1519439.JPJG01000060_gene1903	246.0	0	N/A	N/A
structural_annotation	UHGV-1357199_12	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357199_14	1410650.JHWL01000003_gene2815	92.4	2.44e-17	N/A	N/A
PHROG	UHGV-1357199_15	phrog_22978	1083.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1357199_15	1410650.JHWL01000003_gene2814	415.0	0	N/A	N/A
Pfam	UHGV-1357199_15	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
KOfam	UHGV-1357199_16	K01447	112.6	1.8e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1357199_16	phrog_18955	497.0	0	N/A	unknown function
UniRef90	UHGV-1357199_16	UniRef90_UPI0018753F29	896.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1357199_16	742738.HMPREF9460_03968	412.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1357199_16	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-1357199_16	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1357199_16	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1357199_16	PF09992,COG4632,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_17	phrog_199	64.7	9.7e-19	holin	lysis
UniRef90	UHGV-1357199_17	UniRef90_UPI00187406B4	302.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1357199_17	445974.CLORAM_02916	131.0	7.13e-37	Bacteriophage holin family	N/A
Pfam	UHGV-1357199_17	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1357199_17	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1357199_17	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_18	K14059	115.7	6.6e-34	int; integrase	N/A
PHROG	UHGV-1357199_18	phrog_1	134.7	8.1e-40	integrase	integration and excision
UniRef90	UHGV-1357199_18	UniRef90_UPI001874116E	741.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1357199_18	1235835.C814_03141	225.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1357199_18	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1357199_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1357199_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1357199_18	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_19	phrog_2384	252.3	0	N/A	unknown function
UniRef90	UHGV-1357199_19	UniRef90_G2E734	369.0	0	P63C domain-containing protein	N/A
eggNOG-mapper	UHGV-1357199_19	765913.ThidrDRAFT_4097	369.0	0	P63C domain	N/A
Pfam	UHGV-1357199_19	PF10546	N/A	N/A	P63C domain	P63C
structural_annotation	UHGV-1357199_19	PF10546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357199_20	411467.BACCAP_02671	68.6	0.00000000000306	Endonuclease Exonuclease Phosphatase	N/A
COG	UHGV-1357199_20	COG2374	N/A	N/A	Predicted extracellular nuclease	N/A
structural_annotation	UHGV-1357199_20	PF10754	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_22	phrog_87	80.3	1.8e-23	metallo-protease	other
UniRef90	UHGV-1357199_22	UniRef90_A0A1Y3RG05	241.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1357199_22	1007096.BAGW01000011_gene2354	148.0	6.30584e-44	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1357199_22	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1357199_22	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1357199_22	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_23	K22300	58.2	2.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1357199_23	phrog_8	58.4	1.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1357199_23	UniRef90_UPI001C10ECCC	98.2	4.04e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1357199_23	702450.CUW_0511	56.6	0.0000000644	Transcriptional	N/A
PADLOC	UHGV-1357199_23	retron_type_VI_hth_cluster2_1	43.5	0.00000000000029	N/A	Retron
Pfam	UHGV-1357199_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1357199_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1357199_23	PF00717,PF12844,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_24	K14056	43.5	0.0000000000051	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-1357199_24	phrog_7241	43.3	0.0000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-1357199_24	UniRef90_UPI000262886B	73.9	7.27e-16	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1357199_24	558169.AGAV01000025_gene172	73.9	1.22e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1357199_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1357199_24	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1357199_24	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357199_29	NF037954	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_30	K07741	49.4	0.00000000000015	antB; anti-repressor protein	N/A
PHROG	UHGV-1357199_30	phrog_463	211.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-1357199_30	UniRef90_A0A7I8E0S4	192.0	0	Antirepressor	N/A
eggNOG-mapper	UHGV-1357199_30	1232446.BAIE02000002_gene798	176.0	0	ORF6C domain	N/A
Pfam	UHGV-1357199_30	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1357199_30	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1357199_30	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1357199_30	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357199_31	UniRef90_UPI000F0633F9	87.8	1.85e-21	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1357199_31	693746.OBV_43260	84.3	7.5e-21	N/A	N/A
structural_annotation	UHGV-1357199_31	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_35	K06284	94.1	1.2e-27	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-1357199_35	phrog_4681	87.6	6.4e-26	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1357199_35	UniRef90_UPI0019D3B8B5	88.2	3.59e-21	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1357199_35	373903.Hore_06360	83.6	4.49e-20	TIGRFAM looped-hinge helix DNA binding domain, AbrB family	N/A
Pfam	UHGV-1357199_35	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-1357199_35	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-1357199_35	PF04014,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-1357199_36	phrog_674	163.1	0	N/A	unknown function
UniRef90	UHGV-1357199_36	UniRef90_A0A7X9AE52	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-1357199_36	665956.HMPREF1032_03103	158.0	6.16571e-44	N/A	N/A
Pfam	UHGV-1357199_36	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1357199_36	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_37	K07455	190.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1357199_37	phrog_148	209.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357199_37	UniRef90_G9YN43	343.0	0	Recombinase, phage RecT family	N/A
eggNOG-mapper	UHGV-1357199_37	428127.EUBDOL_01509	290.0	0	RecT family	N/A
Pfam	UHGV-1357199_37	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1357199_37	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1357199_37	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1357199_37	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_38	K06167	42.6	0.0000000000031	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1357199_38	phrog_392	116.5	2.8e-34	metal-dependent hydrolase	other
UniRef90	UHGV-1357199_38	UniRef90_A0A1C6D5R1	311.0	0	Beta-lactamase superfamily domain	N/A
eggNOG-mapper	UHGV-1357199_38	665956.HMPREF1032_03101	183.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1357199_38	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1357199_38	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1357199_38	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-1357199_40	K03111	146.5	2.60642e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1357199_40	phrog_44	156.4	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357199_40	UniRef90_V2ZIP9	202.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1357199_40	1378168.N510_01674	202.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1357199_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1357199_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1357199_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1357199_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1357199_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1357199	Yes	36,406	54	85	1
UHGV-1879187	No	27,953	55	66	1
UHGV-1406866	No	25,987	55	61	1
UHGV-1451741	No	24,589	55	57	1
UHGV-1802939	No	14,971	54	35	1