vOTU vOTU-019108

vOTU: vOTU-019108

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019108
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00040 → vGENUS-00013 → vOTU-019108
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0048600
Biosample ID	N/A
Genome length (bp)	44,779 bps
CheckV completeness	77.61% (Medium-quality)
CDS count	86
CDS density	87.98%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter faecis	Total connections	1926	Host agreement	77.93
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	28	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.61)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0048600_1	phrog_36	67.5	2.7e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0048600_1	UniRef90_A0A410QFZ6	86.7	5.36e-19	N/A	N/A
eggNOG-mapper	UHGV-0048600_1	994573.T472_0211085	75.5	0.00000000000000217	sigma factor activity	N/A
COG	UHGV-0048600_1	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0048600_1	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_2	phrog_38	144.3	8.70206e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0048600_2	UniRef90_A0A8D9PG33	737.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0048600_2	1232453.BAIF02000058_gene1623	420.0	0	TIGRFAM Phage	N/A
COG	UHGV-0048600_2	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0048600_2	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0048600_7	PF04466	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_10	411473.RUMCAL_02525	102.0	1.46e-26	N/A	N/A
UniRef90	UHGV-0048600_11	UniRef90_A0A3R6JTP4	64.7	0.00000000000769	N/A	N/A
structural_annotation	UHGV-0048600_11	PF20037	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_13	phrog_229	117.4	9.9e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-0048600_13	UniRef90_UPI001D02B1F9	264.0	0	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0048600_13	428125.CLOLEP_01391	102.0	3.04e-26	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0048600_13	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0048600_13	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0048600_13	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_14	658655.HMPREF0988_00895	70.1	0.00000000000157	N/A	N/A
PHROG	UHGV-0048600_15	phrog_4608	138.3	6.29996e-41	anti-repressor	transcription regulation
UniRef90	UHGV-0048600_15	UniRef90_A0A1C5WGK5	153.0	1.10983e-42	ORF6N domain	N/A
eggNOG-mapper	UHGV-0048600_15	658655.HMPREF0988_00907	149.0	8.79035e-42	ORF6N domain	N/A
Pfam	UHGV-0048600_15	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-0048600_15	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_16	phrog_31631	42.4	0.0000000000088	N/A	unknown function
eggNOG-mapper	UHGV-0048600_16	397290.C810_01351	53.5	0.0000000082	N/A	N/A
COG	UHGV-0048600_20	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
UniRef90	UHGV-0048600_21	UniRef90_A0A7X5I8Q7	70.1	0.000000000000109	Fork-head domain-containing protein	N/A
PHROG	UHGV-0048600_24	phrog_1233	48.7	0.00000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0048600_24	658655.HMPREF0988_00914	102.0	6.79e-27	N/A	N/A
eggNOG-mapper	UHGV-0048600_25	658655.HMPREF0988_00915	93.2	2.51e-20	N/A	N/A
PHROG	UHGV-0048600_26	phrog_20016	222.6	0	N/A	unknown function
UniRef90	UHGV-0048600_26	UniRef90_A0A285PT46	164.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0048600_26	397290.C810_05214	219.0	0	N/A	N/A
structural_annotation	UHGV-0048600_26	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_27	phrog_16490	197.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0048600_27	397290.C810_01328	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-0048600_28	658655.HMPREF0988_00918	89.0	1.85e-22	N/A	N/A
eggNOG-mapper	UHGV-0048600_29	658655.HMPREF0988_00919	91.7	3.65e-21	N/A	N/A
KOfam	UHGV-0048600_31	K14059	113.3	3.8e-33	int; integrase	N/A
PHROG	UHGV-0048600_31	phrog_1	117.9	1.2e-34	integrase	integration and excision
UniRef90	UHGV-0048600_31	UniRef90_A0A173REA3	789.0	0	Site-specific tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0048600_31	397291.C804_00897	325.0	0	Phage integrase family	N/A
Pfam	UHGV-0048600_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0048600_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0048600_31	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0048600_32	UniRef90_A0A173RE24	151.0	0	Bacterial regulatory proteins, luxR family	N/A
Pfam	UHGV-0048600_32	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0048600_32	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_33	phrog_757	65.8	5.4e-19	DNA methyltransferase	other
eggNOG-mapper	UHGV-0048600_33	658655.HMPREF0988_00884	225.0	0	N/A	N/A
AcrCatalog	UHGV-0048600_33	cluster_47493	166.0	0	NA	N/A
structural_annotation	UHGV-0048600_33	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_37	phrog_874	158.9	0	N/A	unknown function
UniRef90	UHGV-0048600_37	UniRef90_A0A6N7W7Q7	187.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0048600_37	411468.CLOSCI_00298	177.0	0	N/A	N/A
structural_annotation	UHGV-0048600_37	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_42	397290.C810_05186	107.0	1.41e-28	N/A	N/A
PHROG	UHGV-0048600_43	phrog_8684	95.8	4.3e-29	N/A	unknown function
UniRef90	UHGV-0048600_43	UniRef90_A0A173RDP8	291.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0048600_43	742735.HMPREF9467_00920	87.8	2.62e-20	YopX protein	N/A
Pfam	UHGV-0048600_43	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0048600_43	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0048600_43	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_45	1235793.C809_02210	57.4	0.0000000269	N/A	N/A
PHROG	UHGV-0048600_46	phrog_22292	44.2	0.0000000000029	N/A	unknown function
KOfam	UHGV-0048600_50	K02314	310.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0048600_50	phrog_19	294.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0048600_50	UniRef90_A0A173RD23	827.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0048600_50	1298920.KI911353_gene2061	360.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0048600_50	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0048600_50	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0048600_50	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0048600_50	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_51	phrog_11769	193.8	0	N/A	unknown function
UniRef90	UHGV-0048600_51	UniRef90_A0A173RDT0	496.0	0	Phage replisome organizer, putative, N-terminal region	N/A
eggNOG-mapper	UHGV-0048600_51	536232.CLM_1634	188.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0048600_51	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0048600_51	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0048600_51	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_52	411471.SUBVAR_04346	62.0	0.00000000242	N/A	N/A
COG	UHGV-0048600_52	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
PHROG	UHGV-0048600_54	phrog_19106	304.8	0	N/A	unknown function
UniRef90	UHGV-0048600_54	UniRef90_A0A173RDE6	359.0	0	Group I intron endonuclease	N/A
eggNOG-mapper	UHGV-0048600_54	658655.HMPREF0988_00875	270.0	0	N/A	N/A
Pfam	UHGV-0048600_54	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-0048600_54	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0048600_56	K06167	71.3	1.4e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0048600_56	phrog_392	199.9	0	metal-dependent hydrolase	other
UniRef90	UHGV-0048600_56	UniRef90_A0A173REW9	474.0	0	Beta-lactamase superfamily domain	N/A
eggNOG-mapper	UHGV-0048600_56	1144313.PMI10_00501	189.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0048600_56	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0048600_56	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0048600_56	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_58	phrog_25456	87.3	1.5e-25	N/A	unknown function
PHROG	UHGV-0048600_59	phrog_2185	319.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0048600_59	UniRef90_UPI00189B4EB8	423.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0048600_59	658655.HMPREF0988_00886	476.0	0	N/A	N/A
structural_annotation	UHGV-0048600_59	NF007351,COG3723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_62	1232453.BAIF02000057_gene1135	70.9	0.000000000000105	N/A	N/A
KOfam	UHGV-0048600_64	K19171	101.9	6.5e-30	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0048600_64	phrog_77	234.7	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0048600_64	UniRef90_UPI001D02FD96	875.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0048600_64	1294142.CINTURNW_1008	329.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0048600_64	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0048600_64	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_66	phrog_26861	91.6	1.8e-27	N/A	unknown function
UniRef90	UHGV-0048600_66	UniRef90_A0A173RCS5	352.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0048600_66	483218.BACPEC_01931	110.0	2.77e-27	Single-strand binding protein family	N/A
Pfam	UHGV-0048600_66	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0048600_66	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0048600_66	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0048600_69	K07741	120.9	2.5e-35	antB; anti-repressor protein	N/A
PHROG	UHGV-0048600_69	phrog_130	270.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0048600_69	UniRef90_A0A844E191	330.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0048600_69	1582156.A0A0A8WIG2_9CAUD	276.0	0	DNA binding	N/A
Pfam	UHGV-0048600_69	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0048600_69	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0048600_69	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_74	phrog_32192	43.8	0.0000000000037	N/A	unknown function
UniRef90	UHGV-0048600_74	UniRef90_UPI001D0221FF	142.0	6.75986e-42	alanine-zipper protein	N/A
KOfam	UHGV-0048600_75	K18830	53.5	0.0000000000000042	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0048600_75	phrog_2967	54.5	0.0000000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0048600_75	UniRef90_A0A173RCH7	232.0	0	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-0048600_75	1235790.C805_00012	111.0	4e-30	Helix-turn-helix domain	N/A
Pfam	UHGV-0048600_75	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0048600_75	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0048600_75	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0048600_78	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0048600_78	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0048600_79	1232452.BAIB02000007_gene1607	70.1	0.000000000000142	N/A	N/A
eggNOG-mapper	UHGV-0048600_80	665956.HMPREF1032_02937	61.6	0.0000000973	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0048600_80	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0048600_81	phrog_17196	150.5	0	kinase	other
eggNOG-mapper	UHGV-0048600_81	483218.BACPEC_01141	195.0	0	N/A	N/A
structural_annotation	UHGV-0048600_81	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_82	phrog_18190	480.9	0	N/A	unknown function
UniRef90	UHGV-0048600_82	UniRef90_A0A173UFM3	936.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0048600_82	397290.C810_05239	296.0	0	N/A	N/A
Pfam	UHGV-0048600_82	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0048600_82	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_83	phrog_1194	46.7	0.00000000000048	N/A	unknown function
Pfam	UHGV-0048600_83	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0048600_83	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_84	phrog_130	140.5	1.29998e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0048600_84	UniRef90_UPI0009D7969F	236.0	0	transporter	N/A
eggNOG-mapper	UHGV-0048600_84	1443125.Z962_p0009	201.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0048600_84	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0048600_84	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0048600_84	PF02498,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0048600_85	UniRef90_A0A173UG14	575.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0048600_85	1410624.JNKK01000088_gene2110	68.9	0.000000000113	Bacterial Ig-like domain (group 2)	N/A
structural_annotation	UHGV-0048600_85	PF02368,PF07233,NF038353,NF005261	N/A	N/A	N/A	N/A
PHROG	UHGV-0048600_86	phrog_11489	108.5	6.8e-37	N/A	unknown function
UniRef90	UHGV-0048600_86	UniRef90_A0A173UHS1	521.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0048600_86	1232443.BAIA02000078_gene18	80.1	0.000000000000725	phage tail tape measure protein	N/A
COG	UHGV-0048600_86	COG1511	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0048600	Yes	44,779	40	78	1
UHGV-1450162	No	44,779	40	78	1
UHGV-1455390	No	44,175	40	77	1
UHGV-1694069	No	19,840	39	34	1
UHGV-1592936	No	18,024	39	31	1
UHGV-1655945	No	11,132	40	19	1