vOTU vOTU-019167

vOTU: vOTU-019167

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019167
Number of genomes	8
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp900316325
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02319 → vGENUS-19804 → vOTU-019167
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp900316325
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1518513
Biosample ID	N/A
Genome length (bp)	26,998 bps
CheckV completeness	78.05% (Medium-quality)
CDS count	35
CDS density	93.48%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp900316325	Total connections	274	Host agreement	94.53
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp900316325	Total connections	11	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1518513_1	K07273	140.6	1.19993e-41	acm; lysozyme	N/A
PHROG	UHGV-1518513_1	phrog_291	117.8	8.8e-35	endolysin	lysis
UniRef90	UHGV-1518513_1	UniRef90_A0A356C4H3	730.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1518513_1	411470.RUMGNA_00451	150.0	1.98e-39	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-1518513_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1518513_1	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1518513_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1518513_1	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_2	phrog_1129	73.5	1.8e-21	holin	lysis
UniRef90	UHGV-1518513_2	UniRef90_A0A356C4S4	139.0	4.46005e-41	Enolase	N/A
eggNOG-mapper	UHGV-1518513_2	411461.DORFOR_00721	102.0	3.01e-27	N/A	N/A
Pfam	UHGV-1518513_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1518513_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_3	phrog_1863	53.0	5.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1518513_3	1226322.HMPREF1545_04027	85.1	7.24e-21	N/A	N/A
eggNOG-mapper	UHGV-1518513_4	1235793.C809_03302	63.2	0.0000000292	N/A	N/A
PHROG	UHGV-1518513_5	phrog_38707	203.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1518513_5	33035.JPJF01000033_gene2261	228.0	0	tail collar domain protein	N/A
COG	UHGV-1518513_5	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1518513_6	phrog_3558	377.1	0	tail protein	tail
UniRef90	UHGV-1518513_6	UniRef90_A0A356C4L6	1049.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1518513_6	877414.ATWA01000019_gene2050	291.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1518513_6	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1518513_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1518513_6	PF06605,PF21683,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_7	phrog_33	56.7	5e-16	distal tail protein Dit	tail
UniRef90	UHGV-1518513_7	UniRef90_UPI001C016156	180.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1518513_7	411490.ANACAC_00709	164.0	0	phage tail	N/A
COG	UHGV-1518513_7	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1518513_7	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_8	phrog_6900	230.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1518513_8	UniRef90_A0A1C5Y9X6	429.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1518513_8	665950.HMPREF1025_02522	359.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1518513_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1518513_8	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_9	phrog_1633	145.3	1.69557e-43	N/A	unknown function
UniRef90	UHGV-1518513_9	UniRef90_UPI00189DAD07	131.0	4.67e-37	N/A	N/A
eggNOG-mapper	UHGV-1518513_9	1321372.AQQB01000060_gene71	120.0	1.72e-33	N/A	N/A
Pfam	UHGV-1518513_9	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1518513_9	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_10	phrog_1526	77.1	1.8e-22	N/A	unknown function
UniRef90	UHGV-1518513_10	UniRef90_A0A380I717	63.9	0.0000000000141	N/A	N/A
eggNOG-mapper	UHGV-1518513_10	665950.HMPREF1025_02524	70.9	0.00000000000000527	N/A	N/A
PHROG	UHGV-1518513_11	phrog_117	176.6	0	major tail protein	tail
UniRef90	UHGV-1518513_11	UniRef90_A0A356C4M0	358.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1518513_11	748224.HMPREF9436_00696	247.0	0	domain, Protein	N/A
COG	UHGV-1518513_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1518513_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_12	phrog_123	45.4	0.0000000000015	tail terminator	connector
UniRef90	UHGV-1518513_12	UniRef90_A0A2A5RIK6	77.0	5.12e-16	N/A	N/A
eggNOG-mapper	UHGV-1518513_12	1321784.HMPREF1987_01078	89.4	1.21e-21	N/A	N/A
structural_annotation	UHGV-1518513_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_13	phrog_387	69.3	4.5e-20	neck protein	connector
eggNOG-mapper	UHGV-1518513_13	1121864.OMO_02156	57.0	0.00000000105	N/A	N/A
PHROG	UHGV-1518513_14	phrog_501	84.2	1.3e-24	head closure Hc1	connector
UniRef90	UHGV-1518513_14	UniRef90_A0A139QHM6	147.0	6.44597e-44	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1518513_14	665950.HMPREF1025_02528	150.0	0	N/A	N/A
structural_annotation	UHGV-1518513_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_15	phrog_137	90.6	1.2e-26	head-tail adaptor Ad1	connector
UniRef90	UHGV-1518513_15	UniRef90_UPI0019617F49	163.0	0	phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1518513_15	1280698.AUJS01000007_gene1040	162.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1518513_15	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1518513_15	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_17	phrog_32396	135.0	1.8e-40	N/A	unknown function
UniRef90	UHGV-1518513_17	UniRef90_A0A356C4M5	466.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1518513_17	936375.HMPREF1152_0679	365.0	0	Phage capsid family	N/A
Pfam	UHGV-1518513_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1518513_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_18	phrog_233	78.0	1.2e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-1518513_18	UniRef90_UPI001F1CECE0	104.0	1.55e-25	N/A	N/A
eggNOG-mapper	UHGV-1518513_18	1423775.BAMN01000011_gene605	78.6	2.96e-16	N/A	N/A
Pfam	UHGV-1518513_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1518513_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_19	phrog_17688	342.3	0	N/A	unknown function
UniRef90	UHGV-1518513_19	UniRef90_A0A356C4T8	769.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1518513_19	936375.HMPREF1152_0677	629.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1518513_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1518513_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1518513_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1518513_20	PF06442,MF_01194,NF000331,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_21	phrog_2494	300.5	0	minor head protein	head and packaging
UniRef90	UHGV-1518513_21	UniRef90_UPI001F3BD4CE	266.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1518513_21	1280698.AUJS01000007_gene1034	260.0	0	cell adhesion	N/A
Pfam	UHGV-1518513_21	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-1518513_21	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_22	phrog_104	283.0	0	portal protein	head and packaging
UniRef90	UHGV-1518513_22	UniRef90_UPI001A9C29A4	556.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1518513_22	1280698.AUJS01000007_gene1033	540.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1518513_22	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_23	phrog_338	111.9	6.3e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1518513_23	UniRef90_A0A356C4J5	205.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1518513_23	1280698.AUJS01000007_gene1032	189.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1518513_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1518513_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1518513_24	phrog_36	46.4	0.00000000000073	transcriptional regulator	transcription regulation
UniRef90	UHGV-1518513_24	UniRef90_A0A3A9CSN2	59.3	0.0000000215	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-1518513_24	397290.C810_01391	70.9	0.000000000000147	N/A	N/A
PHROG	UHGV-1518513_26	phrog_355	84.2	1.3e-24	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1518513_26	UniRef90_A0A3D5LSK2	133.0	4.56e-38	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-1518513_26	1125725.HMPREF1325_1838	70.9	0.0000000000000275	N/A	N/A
Pfam	UHGV-1518513_26	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1518513_26	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1518513_26	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_27	phrog_15077	110.7	4.7e-33	N/A	unknown function
UniRef90	UHGV-1518513_27	UniRef90_A0A174WLY0	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-1518513_27	1280698.AUJS01000007_gene1019	212.0	0	N/A	N/A
structural_annotation	UHGV-1518513_27	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_28	phrog_8470	275.7	0	N/A	unknown function
UniRef90	UHGV-1518513_28	UniRef90_UPI00164C094F	232.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1518513_28	483218.BACPEC_01166	418.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1518513_28	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1518513_28	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1518513_29	483218.BACPEC_01167	207.0	0	N/A	N/A
PHROG	UHGV-1518513_31	phrog_7566	99.7	1.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-1518513_31	1235800.C819_00511	96.7	2.91e-24	N/A	N/A
KOfam	UHGV-1518513_32	K03469	53.5	0.0000000000000048	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1518513_32	phrog_531	61.5	1.5e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1518513_32	UniRef90_A0A3B8UHR5	160.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1518513_32	1235800.C819_00514	102.0	9.31e-26	RNase H	N/A
Pfam	UHGV-1518513_32	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1518513_32	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1518513_32	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1518513_33	phrog_3584	176.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1518513_33	1235793.C809_03589	152.0	1.74041e-42	N/A	N/A
structural_annotation	UHGV-1518513_33	PF21578	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1518513	Yes	26,998	40	78	1
UHGV-1518522	No	26,909	40	78	1
UHGV-0051675	No	24,312	39	70	1
UHGV-1515787	No	22,368	40	65	1
UHGV-0170743	No	16,370	40	47	1
UHGV-1639279	No	16,370	40	47	1
UHGV-0193402	No	16,336	40	47	1
UHGV-1834397	No	12,106	39	35	1