vOTU vOTU-019273

vOTU: vOTU-019273

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019273
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00481 → vOTU-019273
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0055970
Biosample ID	N/A
Genome length (bp)	40,806 bps
CheckV completeness	73.22% (Medium-quality)
CDS count	62
CDS density	82.69%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	1769	Host agreement	98.93
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Butyrivibrio_A → Butyrivibrio_A crossotus	Total connections	29	Host agreement	79.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0055970_2	K19165	47.3	0.00000000000047	phd; antitoxin Phd	N/A
PHROG	UHGV-0055970_2	phrog_2194	88.6	4.6e-26	N/A	unknown function
UniRef90	UHGV-0055970_2	UniRef90_D4S1E4	152.0	0	Prevent-host-death family protein	N/A
eggNOG-mapper	UHGV-0055970_2	511680.BUTYVIB_01914	152.0	0	Antitoxin Phd_YefM, type II toxin-antitoxin system	N/A
structural_annotation	UHGV-0055970_2	PF02604,TIGR01552,COG2161	N/A	N/A	N/A	N/A
KOfam	UHGV-0055970_3	K07341	141.6	9.6003e-42	doc; death on curing protein	N/A
PHROG	UHGV-0055970_3	phrog_577	119.9	1.2e-35	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0055970_3	UniRef90_D4S1E3	252.0	0	Death-on-curing family protein	N/A
eggNOG-mapper	UHGV-0055970_3	511680.BUTYVIB_01913	252.0	0	Fic/DOC family	N/A
Pfam	UHGV-0055970_3	PF02661	N/A	N/A	Fic/DOC family	Fic
NCBIFam	UHGV-0055970_3	TIGR01550.1	N/A	N/A	type II toxin-antitoxin system death-on-curing family toxin	N/A
COG	UHGV-0055970_3	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
structural_annotation	UHGV-0055970_3	PF02661,TIGR01550,COG3654	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_6	phrog_26785	102.4	2.9e-30	N/A	unknown function
UniRef90	UHGV-0055970_6	UniRef90_A0A136MHX5	105.0	2.94e-23	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-0055970_6	511680.BUTYVIB_01910	461.0	0	helicase domain protein	N/A
PADLOC	UHGV-0055970_6	shah_acc_0139	90.4	2.8e-26	HKD+Snf2	CRISPR-CAS
COG	UHGV-0055970_6	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
eggNOG-mapper	UHGV-0055970_7	511680.BUTYVIB_01909	640.0	0	N/A	N/A
UniRef90	UHGV-0055970_8	UniRef90_UPI00054EE2D2	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0055970_8	511680.BUTYVIB_01908	400.0	0	N/A	N/A
Pfam	UHGV-0055970_8	PF19498	N/A	N/A	N/A	DUF6033
KOfam	UHGV-0055970_9	K06383	194.7	0	spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]	N/A
UniRef90	UHGV-0055970_9	UniRef90_D4S1D6	551.0	0	Putative sigma-E processing peptidase SpoIIGA	N/A
eggNOG-mapper	UHGV-0055970_9	97139.C824_03336	107.0	1.24e-24	aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR	N/A
Pfam	UHGV-0055970_9	PF03419	N/A	N/A	Sporulation factor SpoIIGA	Peptidase_U4
KOfam	UHGV-0055970_10	K03091	248.8	0	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0055970_10	phrog_351	86.0	2.50006e-41	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0055970_10	UniRef90_R5LS57	473.0	0	RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0055970_10	511680.BUTYVIB_01905	473.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
PADLOC	UHGV-0055970_10	MzaA_00001	52.3	1.9e-18	NA	mzaABCDE
Pfam	UHGV-0055970_10	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0055970_10	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0055970_10	NF006158.0	N/A	N/A	RNA polymerase sporulation sigma factor SigE	N/A
COG	UHGV-0055970_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0055970_10	PF04542,MF_00961,NF006158,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0055970_11	K03091	106.6	3.6e-31	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0055970_11	phrog_351	99.8	3.4e-29	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0055970_11	UniRef90_A0A354CIW8	148.0	1.98984e-43	RNA polymerase sigma-G factor (Fragment)	N/A
eggNOG-mapper	UHGV-0055970_11	511680.BUTYVIB_01904	193.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
PADLOC	UHGV-0055970_11	MzaA_00001	50.9	0.000000000000029	NA	mzaABCDE
Pfam	UHGV-0055970_11	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
NCBIFam	UHGV-0055970_11	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0055970_11	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0055970_11	PF04542,MF_04164,TIGR02846	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_13	phrog_21718	48.7	0.00000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0055970_13	658655.HMPREF0988_00919	120.0	3.99e-32	N/A	N/A
structural_annotation	UHGV-0055970_13	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_14	658655.HMPREF0988_00918	81.3	2.14e-19	N/A	N/A
PHROG	UHGV-0055970_15	phrog_16490	189.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0055970_15	397290.C810_01328	184.0	0	N/A	N/A
PHROG	UHGV-0055970_16	phrog_20016	225.5	0	N/A	unknown function
UniRef90	UHGV-0055970_16	UniRef90_A0A285PT46	160.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0055970_16	397290.C810_05214	229.0	0	N/A	N/A
structural_annotation	UHGV-0055970_16	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_17	658655.HMPREF0988_00915	109.0	6.61e-27	N/A	N/A
UniRef90	UHGV-0055970_18	UniRef90_A0A292SSH8	97.8	1.39e-25	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0055970_18	478749.BRYFOR_07643	64.7	0.00000000000032	N/A	N/A
structural_annotation	UHGV-0055970_18	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_20	phrog_1233	58.1	1.7e-16	N/A	unknown function
UniRef90	UHGV-0055970_20	UniRef90_A0A345BPX6	85.9	1.21e-19	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-0055970_20	397290.C810_01336	93.6	1.94e-23	N/A	N/A
PHROG	UHGV-0055970_23	phrog_10678	50.8	0.000000000000042	N/A	unknown function
structural_annotation	UHGV-0055970_27	PF08207,MF_00085,TIGR00037,COG0231	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_32	phrog_31631	60.1	2.6e-17	N/A	unknown function
UniRef90	UHGV-0055970_34	UniRef90_A0A8D9UIS5	278.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0055970_34	658655.HMPREF0988_00895	92.4	4.69e-21	N/A	N/A
structural_annotation	UHGV-0055970_34	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0055970_35	UniRef90_A0A8D9PGW1	64.3	0.00000000000271	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-0055970_35	PF05225,COG2886	N/A	N/A	N/A	N/A
UniRef90	UHGV-0055970_41	UniRef90_UPI000E473058	71.2	0.000000000000133	N/A	N/A
eggNOG-mapper	UHGV-0055970_41	411473.RUMCAL_00360	70.1	0.0000000000000543	N/A	N/A
structural_annotation	UHGV-0055970_41	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_42	phrog_38	126.0	1.9e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0055970_42	UniRef90_A0A3D4KYF7	745.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0055970_42	1232453.BAIF02000058_gene1623	436.0	0	TIGRFAM Phage	N/A
COG	UHGV-0055970_42	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0055970_42	PF05203,PF17289,MF_04147,MF_01420,NF033889,NF007072,COG5362,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_43	phrog_36	64.8	1.7e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0055970_43	397290.C810_01391	186.0	0	N/A	N/A
structural_annotation	UHGV-0055970_43	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0055970_44	UniRef90_A0A8D9UIR9	126.0	7.71e-37	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0055970_45	phrog_64	167.0	0	portal protein	head and packaging
UniRef90	UHGV-0055970_45	UniRef90_R7BGE4	758.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0055970_45	1298920.KI911353_gene2663	465.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0055970_45	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0055970_45	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0055970_46	UniRef90_R6C0B6	122.0	7.98e-32	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0055970_47	phrog_909	52.3	0.0000000000000092	major head protein	head and packaging
eggNOG-mapper	UHGV-0055970_47	1298920.KI911353_gene2661	123.0	6.59e-35	N/A	N/A
PHROG	UHGV-0055970_48	phrog_29	156.3	0	major head protein	head and packaging
UniRef90	UHGV-0055970_48	UniRef90_UPI001D02C54B	682.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0055970_48	1298920.KI911353_gene2660	348.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0055970_48	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0055970_48	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0055970_49	UniRef90_A0A416G2T8	50.1	0.00000303	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0055970_49	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_50	397290.C810_01402	70.5	0.000000000000122	N/A	N/A
PHROG	UHGV-0055970_51	phrog_4105	90.1	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0055970_51	411459.RUMOBE_00911	160.0	0	N/A	N/A
PHROG	UHGV-0055970_52	phrog_18218	138.5	1.79997e-41	N/A	unknown function
UniRef90	UHGV-0055970_52	UniRef90_A0A8D9PGR5	189.0	0	Holin	N/A
eggNOG-mapper	UHGV-0055970_52	411902.CLOBOL_03424	79.0	1.39e-17	N/A	N/A
structural_annotation	UHGV-0055970_52	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_53	1298920.KI911353_gene2656	57.8	0.0000000141	N/A	N/A
structural_annotation	UHGV-0055970_53	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_54	476272.RUMHYD_01963	88.6	1.36e-19	N/A	N/A
structural_annotation	UHGV-0055970_55	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0055970_56	476272.RUMHYD_01968	159.0	0	N/A	N/A
structural_annotation	UHGV-0055970_56	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_57	phrog_36112	54.2	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-0055970_57	UniRef90_A0A8D9PG71	136.0	3.27e-38	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0055970_57	1298920.KI911353_gene2651	70.9	0.000000000000206	N/A	N/A
structural_annotation	UHGV-0055970_57	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_59	phrog_28918	148.3	0	N/A	unknown function
UniRef90	UHGV-0055970_59	UniRef90_A0A318EME6	391.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0055970_59	1298920.KI911353_gene2649	283.0	0	tape measure	N/A
COG	UHGV-0055970_59	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0055970_60	phrog_1194	62.7	5.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0055970_60	1158602.I590_01694	61.2	0.000000000221	N/A	N/A
structural_annotation	UHGV-0055970_60	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_61	phrog_1401	47.0	0.00000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0055970_61	1415775.U729_2617	56.2	0.0000000219	N/A	N/A
structural_annotation	UHGV-0055970_61	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0055970_62	phrog_6616	83.1	2.5e-24	tail protein	tail
eggNOG-mapper	UHGV-0055970_62	1211844.CBLM010000023_gene978	88.2	0.0000000000000095	cellulase activity	N/A
COG	UHGV-0055970_62	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0055970	Yes	40,806	38	73	1
UHGV-1469989	No	40,806	38	73	1
UHGV-1802616	No	13,755	37	24	1
UHGV-1690663	No	10,899	38	19	1
UHGV-1673798	No	10,669	38	19	1
UHGV-1623915	No	10,495	38	18	1
UHGV-1615528	No	10,409	38	18	1
UHGV-1617624	No	10,406	38	18	1