vOTU vOTU-019704

vOTU: vOTU-019704

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019704
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00669 → vGENUS-00886 → vOTU-019704
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0169961
Biosample ID	N/A
Genome length (bp)	28,118 bps
CheckV completeness	60.90% (Medium-quality)
CDS count	37
CDS density	93.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0169961_1	K00789	374.5	0	metK, MAT; S-adenosylmethionine synthetase [EC:2.5.1.6]	N/A
PHROG	UHGV-0169961_1	phrog_1569	330.3	0	N/A	unknown function
UniRef90	UHGV-0169961_1	UniRef90_A0A3D2D5Z0	560.0	0	Methionine adenosyltransferase	N/A
eggNOG-mapper	UHGV-0169961_1	1378168.N510_03361	309.0	0	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	N/A
Pfam	UHGV-0169961_1	PF02772	N/A	N/A	S-adenosylmethionine synthetase, central domain	S-AdoMet_synt_M
Pfam	UHGV-0169961_1	PF02773	N/A	N/A	S-adenosylmethionine synthetase, C-terminal domain	S-AdoMet_synt_C
NCBIFam	UHGV-0169961_1	TIGR01034.1	N/A	N/A	methionine adenosyltransferase	N/A
COG	UHGV-0169961_1	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
KOfam	UHGV-0169961_2	K03091	139.9	2.50006e-41	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0169961_2	phrog_351	72.9	2e-32	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0169961_2	UniRef90_A0A3D2D1Z4	280.0	0	Sigma70_r2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0169961_2	1120746.CCNL01000010_gene1166	88.6	3.19e-19	Sigma-70 region 2	N/A
Pfam	UHGV-0169961_2	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0169961_2	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
NCBIFam	UHGV-0169961_2	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0169961_2	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0169961_2	PF04542,PF08281,MF_00962,NF006158,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_4	phrog_2443	284.3	0	amidoligase enzyme	other
UniRef90	UHGV-0169961_4	UniRef90_A0A3D2D3A3	477.0	0	Virulence associated protein (Fragment)	N/A
eggNOG-mapper	UHGV-0169961_4	610130.Closa_3128	355.0	0	COG NOG18822 non supervised orthologous group	N/A
AcrCatalog	UHGV-0169961_4	cluster_16277	80.5	1.9e-19	NA	N/A
Pfam	UHGV-0169961_4	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-0169961_4	PF12224	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_5	K00682	117.2	1.5e-34	GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9]	N/A
PHROG	UHGV-0169961_5	phrog_2520	130.0	1.2e-38	gamma-glutamyl cyclotransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0169961_5	UniRef90_A0A3D2D272	300.0	0	Gamma-glutamylcyclotransferase	N/A
eggNOG-mapper	UHGV-0169961_5	445972.ANACOL_02316	159.0	0	PFAM AIG2 family protein	N/A
Pfam	UHGV-0169961_5	PF06094	N/A	N/A	Gamma-glutamyl cyclotransferase, AIG2-like	GGACT
COG	UHGV-0169961_5	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
structural_annotation	UHGV-0169961_5	PF06094,COG2105	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_6	phrog_9	474.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0169961_6	UniRef90_A0A3D2D1X4	1084.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0169961_6	1414720.CBYM010000005_gene1368	848.0	0	Terminase	N/A
Pfam	UHGV-0169961_6	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0169961_6	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0169961_6	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0169961_6	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0169961_7	633697.EubceDRAFT1_2933	61.2	0.00000000000785	N/A	N/A
KOfam	UHGV-0169961_8	K07319	149.8	8.40779e-45	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0169961_8	phrog_498	468.3	0	DNA methyltransferase	other
UniRef90	UHGV-0169961_8	UniRef90_A0A7X8ZXD2	571.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0169961_8	573061.Clocel_0772	431.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0169961_8	MTase_II_00015	395.3	0	Type II methyltransferase	RM
Pfam	UHGV-0169961_8	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0169961_8	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0169961_8	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0169961_8	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_9	phrog_2555	50.2	0.000000000000049	N/A	unknown function
eggNOG-mapper	UHGV-0169961_9	1111121.HMPREF1247_1227	73.6	7.2e-17	N/A	N/A
PHROG	UHGV-0169961_10	phrog_12	398.2	0	portal protein	head and packaging
UniRef90	UHGV-0169961_10	UniRef90_UPI000B97DE72	521.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0169961_10	573061.Clocel_0780	498.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0169961_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0169961_10	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0169961_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0169961_10	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_11	K06904	176.9	0	N/A	N/A
PHROG	UHGV-0169961_11	phrog_80	189.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0169961_11	UniRef90_UPI000F52B158	234.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0169961_11	573061.Clocel_0781	221.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0169961_11	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0169961_11	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0169961_11	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0169961_11	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_12	phrog_10	230.7	0	major head protein	head and packaging
UniRef90	UHGV-0169961_12	UniRef90_D9SSF5	624.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0169961_12	573061.Clocel_0782	624.0	0	Phage capsid family	N/A
Pfam	UHGV-0169961_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0169961_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0169961_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0169961_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_13	phrog_40	66.4	3.7e-19	head-tail adaptor Ad1	connector
UniRef90	UHGV-0169961_13	UniRef90_A0A4P8A1T4	92.0	2.11e-22	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0169961_13	1286171.EAL2_808p01750	92.0	3.55e-23	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0169961_13	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0169961_13	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0169961_13	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_14	phrog_25	74.5	1.3e-21	head closure Hc1	connector
UniRef90	UHGV-0169961_14	UniRef90_A0A1B8T6R4	84.0	1.23e-18	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0169961_14	398512.JQKC01000005_gene5453	71.6	0.0000000000000209	Phage head-tail joining protein	N/A
Pfam	UHGV-0169961_14	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0169961_14	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0169961_14	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0169961_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_15	phrog_5	72.5	8.7e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-0169961_15	UniRef90_UPI0010EDA23B	122.0	4.29e-33	HK97 gp10 family phage protein	N/A
Pfam	UHGV-0169961_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0169961_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0169961_15	PF04883,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0169961_16	398512.JQKC01000005_gene5455	69.3	0.000000000000334	N/A	N/A
Pfam	UHGV-0169961_16	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-0169961_16	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_17	phrog_1407	90.2	2.2e-26	major tail protein	tail
UniRef90	UHGV-0169961_17	UniRef90_UPI0010EBAD88	170.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0169961_17	398512.JQKC01000005_gene5456	163.0	0	N/A	N/A
Pfam	UHGV-0169961_17	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-0169961_17	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_18	phrog_34587	64.4	2.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0169961_18	398512.JQKC01000005_gene5459	116.0	1.44e-32	N/A	N/A
structural_annotation	UHGV-0169961_18	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_19	phrog_19318	40.5	0.000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0169961_19	398512.JQKC01000005_gene5460	51.2	0.000000285	N/A	N/A
PHROG	UHGV-0169961_20	phrog_1533	366.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0169961_20	UniRef90_A0A1G5EF29	485.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0169961_20	387631.Asulf_01539	238.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0169961_20	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0169961_20	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0169961_20	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0169961_20	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_21	phrog_1194	80.5	1.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-0169961_21	645991.Sgly_0353	50.1	0.00000355	N/A	N/A
Pfam	UHGV-0169961_21	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0169961_21	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_22	phrog_13879	164.1	0	N/A	unknown function
UniRef90	UHGV-0169961_22	UniRef90_A0A1V5IFK2	156.0	1.82e-36	N/A	N/A
eggNOG-mapper	UHGV-0169961_22	645991.Sgly_0356	108.0	3.51e-22	N/A	N/A
structural_annotation	UHGV-0169961_22	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169961_24	PF16640,NF033510,COG4549	N/A	N/A	N/A	N/A
PHROG	UHGV-0169961_27	phrog_24267	92.3	6e-27	N/A	unknown function
UniRef90	UHGV-0169961_27	UniRef90_A0A516LG32	97.4	1.13e-20	Putative baseplate wedge protein	N/A
eggNOG-mapper	UHGV-0169961_27	508419.F8J176_9CAUD	107.0	2.5e-24	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-0169961_27	COG4675	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169961_28	UniRef90_R7KBG5	77.8	0.00000000000000305	Conserved domain protein	N/A
PHROG	UHGV-0169961_29	phrog_9428	100.9	7.6e-30	N/A	unknown function
UniRef90	UHGV-0169961_29	UniRef90_A0A3D0LZL5	53.5	0.000000336	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0169961_29	1449050.JNLE01000005_gene4825	48.1	0.00000851	N/A	N/A
PHROG	UHGV-0169961_30	phrog_1129	49.0	0.000000000000087	holin	lysis
UniRef90	UHGV-0169961_30	UniRef90_A0A1G6ETY7	96.7	4.79e-24	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0169961_30	665956.HMPREF1032_03272	50.8	0.000000636	Phage holin family Hol44, in holin superfamily V	N/A
structural_annotation	UHGV-0169961_30	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_32	K06400	309.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0169961_32	phrog_95	341.8	0	integrase	integration and excision
UniRef90	UHGV-0169961_32	UniRef90_UPI000984C2A9	389.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0169961_32	646529.Desaci_1340	257.0	0	Similarity to COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0169961_32	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0169961_32	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0169961_32	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0169961_32	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0169961_32	PF00239,PF07508,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_33	K06400	369.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0169961_33	phrog_95	424.4	0	integrase	integration and excision
UniRef90	UHGV-0169961_33	UniRef90_UPI000987B26F	423.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0169961_33	748727.CLJU_c03770	328.0	0	resolvase	N/A
Pfam	UHGV-0169961_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0169961_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0169961_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0169961_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0169961_33	PF00239,PF07508,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_34	K07726	41.2	0.000000000029	K07726; putative transcriptional regulator	N/A
UniRef90	UHGV-0169961_34	UniRef90_A0A3D5PF53	135.0	2.63e-40	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0169961_34	1232437.KL662061_gene4153	61.2	0.0000000000121	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0169961_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0169961_34	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0169961_34	PF01381,NF041951,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0169961_35	K00558	293.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0169961_35	phrog_116	254.5	0	DNA methyltransferase	other
UniRef90	UHGV-0169961_35	UniRef90_A0A3D5PES9	672.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0169961_35	264731.PRU_0938	539.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0169961_35	MTase_II_00164	405.2	0	Type II methyltransferase	RM
Pfam	UHGV-0169961_35	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0169961_35	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0169961_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0169961_35	PF00145,MF_02237,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169961_36	UniRef90_A0A3D5PE65	639.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0169961_36	411465.PEPMIC_01414	408.0	0	HaeIII restriction endonuclease	N/A
PADLOC	UHGV-0169961_36	REase_II_00032	396.8	0	Type II restriction enzyme	RM
Pfam	UHGV-0169961_36	PF09556	N/A	N/A	HaeIII restriction endonuclease	RE_HaeIII
PHROG	UHGV-0169961_37	phrog_4740	66.8	3.4e-19	N/A	unknown function
UniRef90	UHGV-0169961_37	UniRef90_UPI00189FE9FB	68.2	0.0000000000556	P-loop NTPase fold protein	N/A
eggNOG-mapper	UHGV-0169961_37	857290.HMPREF9156_00844	163.0	2.8026e-45	KAP family P-loop domain	N/A
PADLOC	UHGV-0169961_37	ATPase_Blast	69.9	7.8e-20	N/A	N/A
Pfam	UHGV-0169961_37	PF07693	N/A	N/A	KAP family P-loop domain	KAP_NTPase
COG	UHGV-0169961_37	COG4928	N/A	N/A	Predicted P-loop ATPase, KAP-like	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0169961	Yes	28,118	46	61	1
UHGV-1659619	No	23,020	47	49	1
UHGV-1659621	No	23,020	47	49	1
UHGV-1841985	No	20,778	48	44	1
UHGV-1522317	No	20,073	48	43	1
UHGV-1806946	No	12,723	46	28	1