vOTU vOTU-019722

vOTU: vOTU-019722

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019722
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00022 → vGENUS-17158 → vOTU-019722
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0172045
Biosample ID	N/A
Genome length (bp)	42,727 bps
CheckV completeness	53.88% (Medium-quality)
CDS count	50
CDS density	88.04%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	48	Host agreement	97.92
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0172045_1	K22300	60.1	5.5e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0172045_1	phrog_8	70.6	3.4e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172045_1	UniRef90_A0A1Q6KAD1	98.2	3.72e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0172045_1	1121335.Clst_0369	77.0	1.19e-16	helix-turn-helix	N/A
Pfam	UHGV-0172045_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0172045_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0172045_1	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0172045_4	K07705	148.7	3.92364e-44	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-0172045_4	phrog_8810	138.4	5.10003e-41	N/A	unknown function
UniRef90	UHGV-0172045_4	UniRef90_A0A373NRE0	448.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-0172045_4	742740.HMPREF9474_03223	135.0	2.2e-36	LytTr DNA-binding domain	N/A
Pfam	UHGV-0172045_4	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-0172045_4	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-0172045_4	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-0172045_4	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_5	phrog_6745	51.2	0.0000000000000033	endolysin	lysis
UniRef90	UHGV-0172045_5	UniRef90_A0A412SB50	494.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0172045_5	476272.RUMHYD_01851	223.0	0	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0172045_5	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0172045_5	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0172045_5	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0172045_5	PF08239,PF09953,NF040678,COG3942,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_8	phrog_18444	73.7	1.7e-21	N/A	unknown function
UniRef90	UHGV-0172045_8	UniRef90_UPI00156E9A45	72.4	0.00000000000000211	peptide chain release factor 2	N/A
PHROG	UHGV-0172045_9	phrog_6616	718.9	0	tail protein	tail
UniRef90	UHGV-0172045_9	UniRef90_R5QUN9	867.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0172045_9	476272.RUMHYD_01992	351.0	0	N/A	N/A
structural_annotation	UHGV-0172045_9	PF05113,PF13884,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_10	phrog_1194	123.6	8.6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0172045_10	1117108.PAALTS15_13512	73.2	0.00000000000000474	N/A	N/A
structural_annotation	UHGV-0172045_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0172045_11	K03100	100.0	3.9e-29	lepB; signal peptidase I [EC:3.4.21.89]	N/A
UniRef90	UHGV-0172045_11	UniRef90_A0A373NQX5	195.0	0	Signal peptidase I	N/A
eggNOG-mapper	UHGV-0172045_11	411460.RUMTOR_02312	140.0	5e-40	N/A	N/A
Pfam	UHGV-0172045_11	PF10502	N/A	N/A	Signal peptidase, peptidase S26	Peptidase_S26
NCBIFam	UHGV-0172045_11	TIGR02227.1	N/A	N/A	signal peptidase I	N/A
COG	UHGV-0172045_11	COG0681	N/A	N/A	Signal peptidase I	N/A
structural_annotation	UHGV-0172045_11	PF10502,TIGR02227,COG4959	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172045_12	1235793.C809_00537	58.2	0.000000000321	N/A	N/A
eggNOG-mapper	UHGV-0172045_13	411473.RUMCAL_02525	148.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0172045_14	1304866.K413DRAFT_3400	82.0	5.48e-18	N/A	N/A
KOfam	UHGV-0172045_15	K07451	51.5	0.000000000000013	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0172045_15	phrog_16986	191.3	0	N/A	unknown function
UniRef90	UHGV-0172045_15	UniRef90_A0A843HQJ6	203.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0172045_15	411490.ANACAC_00801	178.0	0	endonuclease activity	N/A
Pfam	UHGV-0172045_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0172045_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0172045_16	phrog_28918	282.5	0	N/A	unknown function
UniRef90	UHGV-0172045_16	UniRef90_A0A0F0C7Q9	231.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-0172045_16	1298920.KI911353_gene2649	368.0	0	tape measure	N/A
COG	UHGV-0172045_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
KOfam	UHGV-0172045_17	K07496	182.6	0	K07496; putative transposase	N/A
PHROG	UHGV-0172045_17	phrog_506	167.9	0	transposase	integration and excision
UniRef90	UHGV-0172045_17	UniRef90_R7IV04	682.0	0	Transposase IS605 OrfB family central region	N/A
eggNOG-mapper	UHGV-0172045_17	633697.EubceDRAFT1_2043	683.0	0	Transposase, IS605 OrfB family	N/A
PADLOC	UHGV-0172045_17	Type_V_V_U3	119.3	5.8e-35	Cas12	CRISPR-CAS
Pfam	UHGV-0172045_17	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-0172045_17	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-0172045_17	NF040570.1	N/A	N/A	RNA-guided endonuclease TnpB family protein	N/A
COG	UHGV-0172045_17	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0172045_17	PF07282,PF01385,NF038281,COG0675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172045_20	476272.RUMHYD_01968	133.0	2.84e-37	N/A	N/A
structural_annotation	UHGV-0172045_20	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_21	phrog_443	51.3	0.000000000000031	holin	lysis
UniRef90	UHGV-0172045_21	UniRef90_A0A1I5VN65	93.6	1.05e-23	Phage r1t holin	N/A
eggNOG-mapper	UHGV-0172045_21	397287.C807_03698	88.2	2.67e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0172045_21	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0172045_21	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172045_22	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172045_23	476272.RUMHYD_01963	95.9	1.56e-22	N/A	N/A
AcrCatalog	UHGV-0172045_23	cluster_24841	73.2	2.55e-18	NA	N/A
structural_annotation	UHGV-0172045_24	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0172045_25	742733.HMPREF9469_01803	63.2	0.0000000023	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0172045_25	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0172045_26	phrog_1233	41.5	0.000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0172045_26	397290.C810_01336	72.4	0.00000000000000883	N/A	N/A
PHROG	UHGV-0172045_27	phrog_1233	73.1	5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0172045_27	1151292.QEW_4538	84.0	1.35e-19	N/A	N/A
eggNOG-mapper	UHGV-0172045_29	1408437.JNJN01000043_gene802	158.0	0	N/A	N/A
PHROG	UHGV-0172045_30	phrog_16490	224.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0172045_30	658655.HMPREF0988_00917	180.0	0	N/A	N/A
PHROG	UHGV-0172045_32	phrog_21718	67.9	3.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0172045_32	476272.RUMHYD_01952	111.0	8.94e-29	N/A	N/A
UniRef90	UHGV-0172045_33	UniRef90_A0A373NQ83	148.0	4.2039e-45	Sigma-70 family RNA polymerase sigma factor	N/A
Pfam	UHGV-0172045_33	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0172045_33	PF04545,MF_00674,NF001067,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_34	phrog_937	60.0	2.1e-17	hemolysin	other
eggNOG-mapper	UHGV-0172045_35	476272.RUMHYD_01948	107.0	5.07e-29	N/A	N/A
PHROG	UHGV-0172045_36	phrog_29	144.5	7.90332e-43	major head protein	head and packaging
UniRef90	UHGV-0172045_36	UniRef90_A0A352P898	392.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0172045_36	1232443.BAIA02000078_gene29	286.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0172045_36	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0172045_36	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_37	phrog_909	73.6	2.6e-21	major head protein	head and packaging
UniRef90	UHGV-0172045_37	UniRef90_K1TUL5	61.6	0.000000000707	N/A	N/A
eggNOG-mapper	UHGV-0172045_37	1497679.EP56_02915	68.9	0.000000000000117	N/A	N/A
structural_annotation	UHGV-0172045_37	PF02924	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172045_38	UniRef90_UPI000E41BB01	63.2	0.00000000756	N/A	N/A
eggNOG-mapper	UHGV-0172045_38	1298920.KI911353_gene2662	52.8	0.00000904	N/A	N/A
PHROG	UHGV-0172045_39	phrog_2468	46.9	0.00000000000015	head morphogenesis	head and packaging
UniRef90	UHGV-0172045_39	UniRef90_K1V7A5	293.0	0	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0172045_39	1052684.PPM_2647	59.3	0.0000000827	phage Mu protein	N/A
Pfam	UHGV-0172045_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0172045_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172045_39	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_40	phrog_64	179.2	0	portal protein	head and packaging
UniRef90	UHGV-0172045_40	UniRef90_A0A373NRD8	966.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0172045_40	1298920.KI911353_gene2663	572.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0172045_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0172045_40	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_41	phrog_36	71.0	2.3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172045_41	UniRef90_A0A373NRA4	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-0172045_41	97138.C820_00221	72.8	0.0000000000000212	sigma factor activity	N/A
Pfam	UHGV-0172045_41	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0172045_41	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0172045_41	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_42	phrog_38	162.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0172045_42	UniRef90_A0A318EQM2	510.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0172045_42	1123263.AUKY01000015_gene1608	339.0	0	chromosome segregation	N/A
COG	UHGV-0172045_42	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172045_42	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0172045_43	K14415	182.4	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-0172045_43	phrog_1075	240.9	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172045_43	UniRef90_UPI001898CD6A	363.0	0	RtcB family protein	N/A
eggNOG-mapper	UHGV-0172045_43	397290.C810_01387	310.0	0	tRNA-splicing ligase RtcB	N/A
Pfam	UHGV-0172045_43	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-0172045_43	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-0172045_43	PF01139,MF_03144,NF007153,COG1690	N/A	N/A	N/A	N/A
KOfam	UHGV-0172045_44	K07496	164.1	0	K07496; putative transposase	N/A
PHROG	UHGV-0172045_44	phrog_506	171.9	0	transposase	integration and excision
UniRef90	UHGV-0172045_44	UniRef90_A0A6L8TA70	758.0	0	IS200/IS605 family element transposase accessory protein TnpB	N/A
eggNOG-mapper	UHGV-0172045_44	411459.RUMOBE_01965	762.0	0	TIGRFAM transposase, IS605 OrfB family	N/A
PADLOC	UHGV-0172045_44	Cas14u	81.4	3.1e-23	CAS-V-F; effector__SPE	CRISPR-CAS
Pfam	UHGV-0172045_44	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-0172045_44	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-0172045_44	NF040570.1	N/A	N/A	RNA-guided endonuclease TnpB family protein	N/A
COG	UHGV-0172045_44	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0172045_44	PF01385,MF_00034,NF038281,COG0675	N/A	N/A	N/A	N/A
PHROG	UHGV-0172045_46	phrog_14301	189.4	0	RNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172045_46	UniRef90_UPI001ADCC41E	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0172045_46	1429046.RR21198_4862	173.0	0	N/A	N/A
Pfam	UHGV-0172045_46	PF17720	N/A	N/A	N/A	DUF5565
structural_annotation	UHGV-0172045_46	PF17720	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0172045	Yes	42,727	38	54	1
UHGV-0173294	No	25,905	38	33	1
UHGV-1707706	No	19,916	39	25	1
UHGV-0207348	No	17,758	39	22	1