vOTU vOTU-019762

vOTU: vOTU-019762

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019762
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-03428 → vOTU-019762
Host lineage
Host range breadth
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0816712
Biosample ID	SAMN07211083
Genome length (bp)	28,189 bps
CheckV completeness	83.64% (Medium-quality)
CDS count	39
CDS density	93.62%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 83.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0816712_1	phrog_361	71.8	9.7e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0816712_1	UniRef90_A0A1C6H6I9	147.0	2.28412e-43	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0816712_1	1145276.T479_19995	52.8	0.000000428	Phage terminase, small subunit	N/A
Pfam	UHGV-0816712_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0816712_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0816712_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_2	phrog_9	302.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0816712_2	UniRef90_A0A1Y4R6J8	1008.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0816712_2	1226322.HMPREF1545_00113	919.0	0	Phage Terminase	N/A
Pfam	UHGV-0816712_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0816712_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0816712_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0816712_2	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_3	phrog_12	168.4	0	portal protein	head and packaging
UniRef90	UHGV-0816712_3	UniRef90_U2SKC6	561.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0816712_3	1226322.HMPREF1545_00114	561.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0816712_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0816712_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0816712_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0816712_3	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0816712_4	K06904	151.0	9.80909e-45	N/A	N/A
PHROG	UHGV-0816712_4	phrog_80	181.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0816712_4	UniRef90_A0A1F2PDD9	254.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0816712_4	398512.JQKC01000009_gene450	229.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0816712_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0816712_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0816712_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0816712_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_5	phrog_10	207.7	0	major head protein	head and packaging
UniRef90	UHGV-0816712_5	UniRef90_A0A1C6H720	699.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0816712_5	1226322.HMPREF1545_00116	679.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0816712_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0816712_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0816712_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0816712_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0816712_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_6	phrog_2550	66.7	2.2e-19	N/A	unknown function
UniRef90	UHGV-0816712_6	UniRef90_UPI0008717716	83.6	4.56e-19	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0816712_6	1226322.HMPREF1545_00117	92.4	2.52e-23	N/A	N/A
structural_annotation	UHGV-0816712_6	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_7	phrog_19734	61.5	1.6e-17	N/A	unknown function
UniRef90	UHGV-0816712_7	UniRef90_A0A316NL63	97.8	5.57e-24	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0816712_7	999413.HMPREF1094_02006	57.8	0.00000000514	N/A	N/A
structural_annotation	UHGV-0816712_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0816712_8	1235798.C817_04588	92.8	4.39e-23	N/A	N/A
structural_annotation	UHGV-0816712_8	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0816712_9	UniRef90_A0A1C6FG30	138.0	1.29e-38	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0816712_9	908340.HMPREF9406_2573	134.0	4.17e-38	N/A	N/A
structural_annotation	UHGV-0816712_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_10	phrog_88	109.4	2.1e-32	major tail protein	tail
UniRef90	UHGV-0816712_10	UniRef90_UPI0018771F27	294.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0816712_10	33035.JPJF01000039_gene278	117.0	2.38e-30	N/A	N/A
NCBIFam	UHGV-0816712_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0816712_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0816712_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_13	phrog_23464	365.5	0	N/A	unknown function
UniRef90	UHGV-0816712_13	UniRef90_A0A316M686	87.4	0.0000000000000512	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0816712_13	665950.HMPREF1025_02660	342.0	0	phage tail tape measure protein	N/A
COG	UHGV-0816712_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0816712_13	PF20155,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0816712_14	1235797.C816_02660	103.0	5.65e-27	N/A	N/A
structural_annotation	UHGV-0816712_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_15	phrog_13879	536.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0816712_15	1235797.C816_02659	651.0	0	N/A	N/A
structural_annotation	UHGV-0816712_15	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
COG	UHGV-0816712_16	COG4722	N/A	N/A	Phage-related protein YomH	N/A
KOfam	UHGV-0816712_17	K01361	66.6	1.7e-19	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0816712_17	phrog_11157	237.8	0	N/A	unknown function
UniRef90	UHGV-0816712_17	UniRef90_UPI001C10C6DC	388.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0816712_17	476272.RUMHYD_02867	278.0	0	N/A	N/A
Pfam	UHGV-0816712_17	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0816712_17	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0816712_17	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0816712_17	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_18	phrog_18725	104.2	9.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0816712_18	1226322.HMPREF1545_00062	140.0	1.71e-39	N/A	N/A
structural_annotation	UHGV-0816712_18	PF13754,COG2372	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0816712_19	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_20	phrog_4912	88.3	1e-25	tail fiber assembly	tail
UniRef90	UHGV-0816712_20	UniRef90_A0A437MC91	86.3	4.66e-19	Phage tail protein	N/A
eggNOG-mapper	UHGV-0816712_20	1121406.JAEX01000012_gene656	85.9	2.84e-19	Phage tail assembly chaperone protein	N/A
Pfam	UHGV-0816712_20	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-0816712_20	PF16778	N/A	N/A	N/A	N/A
KOfam	UHGV-0816712_22	K01448	163.9	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0816712_22	phrog_18955	190.7	0	N/A	unknown function
UniRef90	UHGV-0816712_22	UniRef90_A0A1C6JAB9	387.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0816712_22	1226322.HMPREF1545_00782	281.0	0	N/A	N/A
Pfam	UHGV-0816712_22	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0816712_22	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0816712_22	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0816712_22	PF01520,PF09992,MF_00417,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_23	phrog_1129	65.4	6.5e-19	holin	lysis
UniRef90	UHGV-0816712_23	UniRef90_A0A416MDZ9	130.0	8.83e-38	Enolase	N/A
eggNOG-mapper	UHGV-0816712_23	742740.HMPREF9474_03522	118.0	1.02e-33	N/A	N/A
Pfam	UHGV-0816712_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0816712_23	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0816712_25	K14059	309.8	0	int; integrase	N/A
PHROG	UHGV-0816712_25	phrog_1	224.1	0	integrase	integration and excision
UniRef90	UHGV-0816712_25	UniRef90_A0A212JT46	582.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0816712_25	877414.ATWA01000018_gene2094	559.0	0	Phage integrase family	N/A
Pfam	UHGV-0816712_25	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0816712_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0816712_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0816712_25	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_26	phrog_806	46.1	0.0000000000009	N/A	unknown function
UniRef90	UHGV-0816712_26	UniRef90_A0A1C6HT90	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-0816712_26	1280686.AUKE01000001_gene2110	91.3	2.21e-20	N/A	N/A
Pfam	UHGV-0816712_26	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-0816712_26	PF16729,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-0816712_27	K01356	137.9	1.10001e-40	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0816712_27	phrog_4	121.2	1.1e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0816712_27	UniRef90_UPI001EDD2FD6	284.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0816712_27	1262914.BN533_00809	192.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0816712_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0816712_27	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0816712_27	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0816712_27	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0816712_28	UniRef90_R6I666	75.9	1.4e-16	Putative cro repressor	N/A
eggNOG-mapper	UHGV-0816712_28	1262914.BN533_00808	75.9	2.35e-17	N/A	N/A
Pfam	UHGV-0816712_28	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0816712_28	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0816712_28	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_30	phrog_750	73.7	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0816712_30	742723.HMPREF9477_00931	83.6	1.92e-19	N/A	N/A
structural_annotation	UHGV-0816712_30	PF13835,NF040858	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_31	phrog_7338	42.8	0.0000000000077	N/A	unknown function
UniRef90	UHGV-0816712_31	UniRef90_UPI0017460947	68.6	0.000000000000429	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0816712_31	999423.HMPREF9161_01307	51.6	0.000000128	Helix-turn-helix domain	N/A
Pfam	UHGV-0816712_31	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0816712_31	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
PHROG	UHGV-0816712_33	phrog_4973	68.1	1.2e-19	N/A	unknown function
UniRef90	UHGV-0816712_33	UniRef90_A0A6J5M6R8	49.7	0.00001	Helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0816712_33	935261.JAGL01000009_gene1175	54.3	0.0000000162	Helix-turn-helix domain	N/A
Pfam	UHGV-0816712_33	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0816712_34	PF09943	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_35	phrog_659	199.1	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0816712_35	UniRef90_UPI001E5A6693	287.0	0	N/A	N/A
eggNOG-mapper	UHGV-0816712_35	1507.HMPREF0262_00431	218.0	0	N/A	N/A
Pfam	UHGV-0816712_35	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0816712_35	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_36	phrog_72	70.3	2.5e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0816712_36	UniRef90_UPI001F3F3E5C	167.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0816712_36	1507.HMPREF0262_00432	125.0	3.43e-34	N/A	N/A
structural_annotation	UHGV-0816712_36	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_37	phrog_7370	63.6	3.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0816712_37	UniRef90_A0A3D0LZU3	135.0	3.33e-39	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0816712_37	1123058.KB894266_gene1536	57.0	0.0000000499	HNH endonuclease	N/A
Pfam	UHGV-0816712_37	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-0816712_37	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0816712_38	K03111	141.1	1.19993e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0816712_38	phrog_44	149.0	2.52234e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0816712_38	UniRef90_A0A847VY31	182.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0816712_38	1519439.JPJG01000082_gene432	177.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0816712_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0816712_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0816712_38	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0816712_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0816712_38	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0816712_39	phrog_15768	64.3	2.3e-18	N/A	unknown function
UniRef90	UHGV-0816712_39	UniRef90_A0A1C6J8D5	108.0	3.13e-25	N/A	N/A
eggNOG-mapper	UHGV-0816712_39	1121344.JHZO01000003_gene982	61.2	0.0000000167	N/A	N/A
Pfam	UHGV-0816712_39	PF19808	N/A	N/A	N/A	DUF6291
NCBIFam	UHGV-0816712_39	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0816712_39	PF19808	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0816712	Yes	28,189	51	84	1
UHGV-0204875	No	23,790	51	69	1
UHGV-0177741	No	21,672	52	63	1
UHGV-1357913	No	17,216	50	51	1