vOTU vOTU-019851

vOTU: vOTU-019851

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-019851
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00205 → vOTU-019851
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2032993
Biosample ID	SAMEA2737795
Genome length (bp)	27,896 bps
CheckV completeness	66.22% (Medium-quality)
CDS count	44
CDS density	89.54%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	263	Host agreement	96.58
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	31	Host agreement	90.32

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2032993_1	phrog_4433	119.9	2.3e-35	N/A	unknown function
UniRef90	UHGV-2032993_1	UniRef90_A0A6M5C839	98.2	5.21e-23	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-2032993_1	33035.JPJF01000122_gene2458	98.6	9.3e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2032993_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-2032993_2	phrog_373	153.5	1.4013e-45	anti-repressor	transcription regulation
UniRef90	UHGV-2032993_2	UniRef90_UPI001CBC74BC	303.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2032993_2	748224.HMPREF9436_01449	159.0	5.60519e-45	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-2032993_2	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-2032993_2	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2032993_2	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-2032993_2	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-2032993_5	UniRef90_A0A1C7FQD9	62.0	0.0000000000277	Transcriptional regulator	N/A
Pfam	UHGV-2032993_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2032993_5	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2032993_6	K07741	135.5	8.5e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-2032993_6	phrog_63	110.8	1.5e-32	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2032993_6	UniRef90_A0A6N7TLD1	260.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-2032993_6	1051631.F8HGQ0_9CAUD	211.0	0	DNA binding	N/A
Pfam	UHGV-2032993_6	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-2032993_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-2032993_6	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_7	phrog_8	40.5	0.000000000059	transcriptional regulator	transcription regulation
UniRef90	UHGV-2032993_7	UniRef90_UPI001C009F10	116.0	6.77e-33	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2032993_7	699218.HMPREF0889_0208	48.9	0.00000202	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2032993_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2032993_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2032993_7	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2032993_8	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_11	phrog_4980	108.8	1e-32	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2032993_11	UniRef90_UPI000F643789	77.8	0.0000000000000132	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-2032993_11	428127.EUBDOL_01530	69.3	0.0000000000206	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-2032993_11	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-2032993_11	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-2032993_11	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-2032993_11	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-2032993_14	UniRef90_UPI0018CC79B4	323.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2032993_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2032993_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2032993_14	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2032993_15	K14059	117.4	2.2e-34	int; integrase	N/A
PHROG	UHGV-2032993_15	phrog_1	102.5	5.2e-30	integrase	integration and excision
UniRef90	UHGV-2032993_15	UniRef90_E2ZNV1	735.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-2032993_15	748224.HMPREF9436_03382	735.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2032993_15	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2032993_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2032993_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2032993_15	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2032993_17	476272.RUMHYD_01772	56.6	0.0000000487	N/A	N/A
structural_annotation	UHGV-2032993_17	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_18	phrog_20016	203.5	0	N/A	unknown function
UniRef90	UHGV-2032993_18	UniRef90_A0A285PT46	210.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2032993_18	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-2032993_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_19	phrog_16490	148.2	4.34403e-44	N/A	unknown function
eggNOG-mapper	UHGV-2032993_19	1408437.JNJN01000043_gene803	139.0	1.86e-37	N/A	N/A
PHROG	UHGV-2032993_21	phrog_374	221.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2032993_21	UniRef90_A0A7W0C2S3	206.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-2032993_21	397290.C810_05173	211.0	0	N/A	N/A
PHROG	UHGV-2032993_22	phrog_21718	102.8	2.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-2032993_22	476272.RUMHYD_01768	67.8	0.00000000000219	N/A	N/A
PHROG	UHGV-2032993_23	phrog_3754	97.6	9.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-2032993_23	1235790.C805_00054	109.0	2.61e-29	N/A	N/A
structural_annotation	UHGV-2032993_24	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_25	phrog_15303	77.2	1.7e-22	N/A	unknown function
KOfam	UHGV-2032993_27	K07273	171.8	0	acm; lysozyme	N/A
PHROG	UHGV-2032993_27	phrog_291	132.2	4.8e-39	endolysin	lysis
UniRef90	UHGV-2032993_27	UniRef90_UPI001D0EE7D8	303.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-2032993_27	748224.HMPREF9436_00154	282.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2032993_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2032993_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2032993_27	PF01183,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-2032993_28	K10804	55.1	6.9e-16	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-2032993_28	phrog_5240	82.2	4.4e-24	tail fiber protein	tail
eggNOG-mapper	UHGV-2032993_28	1410650.JHWL01000010_gene2723	68.9	0.00000000114	N/A	N/A
Pfam	UHGV-2032993_28	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
structural_annotation	UHGV-2032993_28	PF13472,NF007819,COG2755	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2032993_29	1304866.K413DRAFT_1235	60.1	0.000000013	PFAM Phage tail protein	N/A
COG	UHGV-2032993_29	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2032993_29	PF11681,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_31	phrog_3558	281.7	0	tail protein	tail
UniRef90	UHGV-2032993_31	UniRef90_A0A844DGT5	1335.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2032993_31	658088.HMPREF0987_01107	119.0	1.17e-25	Prophage endopeptidase tail	N/A
Pfam	UHGV-2032993_31	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-2032993_31	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2032993_31	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_32	phrog_28775	84.7	1.5e-27	tail length tape measure protein	tail
UniRef90	UHGV-2032993_32	UniRef90_A0A844DDD5	1066.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-2032993_32	1492737.FEM08_12070	144.0	4.31e-33	tape measure	N/A
Pfam	UHGV-2032993_32	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2032993_32	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2032993_32	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2032993_32	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_35	phrog_885	60.4	2.4e-17	major tail protein	tail
eggNOG-mapper	UHGV-2032993_35	457396.CSBG_01054	59.3	0.000000054	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-2032993_35	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-2032993_35	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2032993_36	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_37	phrog_17977	53.6	0.000000000000003	N/A	unknown function
UniRef90	UHGV-2032993_37	UniRef90_A0A844DHJ8	188.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-2032993_37	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_39	phrog_544	146.1	2.29813e-43	major head protein	head and packaging
UniRef90	UHGV-2032993_39	UniRef90_R0BKA1	426.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2032993_39	476272.RUMHYD_01776	316.0	0	N/A	N/A
structural_annotation	UHGV-2032993_39	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2032993_40	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_42	phrog_5	53.1	0.0000000000000079	tail completion or Neck1 protein	connector
UniRef90	UHGV-2032993_42	UniRef90_A0A6N7TNP6	293.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2032993_42	1123309.AQYB01000018_gene814	95.5	3.52e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2032993_42	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2032993_42	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2032993_44	phrog_8680	204.3	0	N/A	unknown function
UniRef90	UHGV-2032993_44	UniRef90_A0A844D688	447.0	0	N/A	N/A
eggNOG-mapper	UHGV-2032993_44	1423790.BN53_04265	176.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-2032993_44	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-2032993_44	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2032993_44	PF14386	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2032993	Yes	27,896	52	66	1
UHGV-1722007	No	20,140	52	48	1
UHGV-0183574	No	18,246	52	43	1
UHGV-0079820	No	14,055	51	33	1