vOTU vOTU-020319

vOTU: vOTU-020319

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-020319
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vOTU-020319
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G sp000434315
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0097188
Biosample ID	SAMEA3708495
Genome length (bp)	30,018 bps
CheckV completeness	75.52% (Medium-quality)
CDS count	48
CDS density	93.65%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G sp000434315	Total connections	55	Host agreement	96.36
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.52)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0097188_2	phrog_3584	142.9	2.20004e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0097188_2	610130.Closa_0713	194.0	0	N/A	N/A
UniRef90	UHGV-0097188_6	UniRef90_UPI001C0EE701	85.9	2.17e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0097188_6	1280698.AUJS01000007_gene1016	94.7	2.04e-22	N/A	N/A
PHROG	UHGV-0097188_7	phrog_4433	56.8	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0097188_7	411902.CLOBOL_05698	135.0	1.29e-37	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0097188_7	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0097188_7	PF12120,NF000318	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_8	phrog_8470	229.9	0	N/A	unknown function
UniRef90	UHGV-0097188_8	UniRef90_UPI001D0E6B3F	676.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0097188_8	411902.CLOBOL_05697	551.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0097188_8	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0097188_8	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_9	phrog_15077	108.1	1.6e-31	N/A	unknown function
UniRef90	UHGV-0097188_9	UniRef90_A0A3E3IZW1	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0097188_9	1280698.AUJS01000007_gene1019	197.0	0	N/A	N/A
structural_annotation	UHGV-0097188_9	PF11300,NF038070	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_10	K01160	43.0	0.000000000012	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0097188_10	phrog_140	111.5	6.9e-33	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097188_10	UniRef90_A0A373VSB3	233.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0097188_10	1292035.H476_1025	94.0	1.38e-22	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0097188_10	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0097188_10	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0097188_10	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_11	K01154	41.6	0.000000000014	hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]	N/A
PHROG	UHGV-0097188_11	phrog_2668	76.0	5e-22	N/A	unknown function
UniRef90	UHGV-0097188_11	UniRef90_W1Q2J1	109.0	1.07e-27	Methylase_S domain-containing protein	N/A
eggNOG-mapper	UHGV-0097188_11	592010.GCWU000182_001449	109.0	1.79e-28	Type I restriction modification DNA specificity domain	N/A
PADLOC	UHGV-0097188_11	Specificity_I_00134	43.0	0.000000000013	Type I specificity subunit	RM
Pfam	UHGV-0097188_11	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
structural_annotation	UHGV-0097188_11	PF01420,COG0732	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_12	K03427	210.5	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0097188_12	phrog_6380	395.8	0	DNA methyltransferase	other
UniRef90	UHGV-0097188_12	UniRef90_UPI0018A97EF7	405.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0097188_12	1201292.DR75_1654	389.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-0097188_12	MTase_I_00005	273.4	0	Type I methyltransferase	RM
Pfam	UHGV-0097188_12	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0097188_12	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0097188_12	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097188_17	UniRef90_A0A373LPL3	121.0	5.04e-35	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-0097188_17	1304866.K413DRAFT_0813	68.6	0.0000000000000089	N/A	N/A
structural_annotation	UHGV-0097188_17	PF10723,NF008671,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_18	phrog_15198	45.6	0.00000000000047	N/A	unknown function
UniRef90	UHGV-0097188_18	UniRef90_A0A373VSI6	330.0	0	N/A	N/A
Pfam	UHGV-0097188_18	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0097188_19	phrog_30559	59.8	5.7e-17	N/A	unknown function
PHROG	UHGV-0097188_21	phrog_986	76.7	2e-22	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097188_21	UniRef90_UPI001F065E7B	59.3	0.000000147	N/A	N/A
eggNOG-mapper	UHGV-0097188_21	1204534.J9QD24_9CAUD	56.6	0.0000000263	N/A	N/A
Pfam	UHGV-0097188_21	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0097188_21	PF12961,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_23	phrog_11237	43.2	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0097188_23	428125.CLOLEP_01348	50.1	0.00000257	N/A	N/A
KOfam	UHGV-0097188_24	K07451	47.4	0.0000000000004	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0097188_24	phrog_119	69.5	4.9e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097188_24	UniRef90_A0A415MTD9	103.0	3.53e-26	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0097188_24	574375.BAGA_00230	87.0	1.04e-20	HNH endonuclease	N/A
Pfam	UHGV-0097188_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0097188_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0097188_26	phrog_9	276.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0097188_26	UniRef90_A0A316SIU9	677.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0097188_26	1235798.C817_02581	470.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0097188_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0097188_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0097188_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_27	phrog_12	106.4	2.2e-31	portal protein	head and packaging
UniRef90	UHGV-0097188_27	UniRef90_A0A316S734	317.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0097188_27	926561.KB900623_gene767	214.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0097188_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0097188_27	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0097188_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0097188_27	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_28	K01358	148.3	6.86636e-44	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0097188_28	phrog_94	240.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0097188_28	UniRef90_UPI00111E41DA	241.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0097188_28	1232452.BAIB02000007_gene1626	205.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0097188_28	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0097188_28	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0097188_28	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_29	phrog_10	100.8	1.8e-29	major head protein	head and packaging
UniRef90	UHGV-0097188_29	UniRef90_UPI001BA6BAB6	406.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0097188_29	1384484.AEQU_1180	316.0	0	Phage capsid family	N/A
Pfam	UHGV-0097188_29	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0097188_29	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0097188_29	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0097188_29	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_30	phrog_749	41.3	0.000000000022	N/A	unknown function
UniRef90	UHGV-0097188_30	UniRef90_A0A1I3QJG6	70.9	0.0000000000000783	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0097188_30	1121866.AUGK01000006_gene881	56.2	0.0000000108	N/A	N/A
PHROG	UHGV-0097188_31	phrog_5635	50.9	0.00000000000003	head-tail adaptor	connector
UniRef90	UHGV-0097188_31	UniRef90_UPI0011070497	103.0	1.46e-26	phage head closure protein	N/A
eggNOG-mapper	UHGV-0097188_31	1384484.AEQU_1178	73.2	0.00000000000000441	N/A	N/A
structural_annotation	UHGV-0097188_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097188_32	1121866.AUGK01000006_gene883	64.3	0.0000000000102	N/A	N/A
structural_annotation	UHGV-0097188_32	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_33	phrog_5509	80.0	2.7e-23	neck protein	connector
UniRef90	UHGV-0097188_33	UniRef90_W0FMR6	98.6	7.18e-24	Gp9 protein	N/A
eggNOG-mapper	UHGV-0097188_33	1027396.LMOSA_21450	52.8	0.00000081	N/A	N/A
structural_annotation	UHGV-0097188_33	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097188_34	UniRef90_A0A316S919	148.0	1.29004e-41	Phage tail protein	N/A
eggNOG-mapper	UHGV-0097188_34	1384484.AEQU_1175	125.0	7.83e-34	N/A	N/A
structural_annotation	UHGV-0097188_34	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_38	K20478	53.4	7.3e-16	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0097188_38	phrog_1533	144.2	3.78351e-44	tail length tape measure protein	tail
UniRef90	UHGV-0097188_38	UniRef90_A0A371ARP8	352.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0097188_38	931626.Awo_c30950	326.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0097188_38	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0097188_38	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0097188_38	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0097188_38	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097188_39	1069533.Sinf_0797	61.2	0.0000000191	phage tail	N/A
COG	UHGV-0097188_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0097188_40	phrog_3558	186.4	0	tail protein	tail
UniRef90	UHGV-0097188_40	UniRef90_A0A373Y1Z4	137.0	2.63e-32	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0097188_40	1123298.KB904077_gene470	73.2	0.0000000000198	Prophage endopeptidase tail	N/A
Pfam	UHGV-0097188_40	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0097188_40	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0097188_40	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_42	K10268	47.1	0.00000000000016	FBXL2_20; F-box and leucine-rich repeat protein 2/20	N/A
PHROG	UHGV-0097188_42	phrog_35892	46.7	1.3e-19	N/A	unknown function
Pfam	UHGV-0097188_42	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0097188_42	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
structural_annotation	UHGV-0097188_42	PF13306,PF10651,NF033188	N/A	N/A	N/A	N/A
PHROG	UHGV-0097188_44	phrog_4105	93.2	2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0097188_44	1121105.ATXL01000027_gene760	77.0	1.47e-16	N/A	N/A
PHROG	UHGV-0097188_45	phrog_443	58.9	1.5e-16	holin	lysis
UniRef90	UHGV-0097188_45	UniRef90_A0A1I0HNR6	83.6	8.44e-20	Holin, r1t family	N/A
eggNOG-mapper	UHGV-0097188_45	397288.C806_00114	81.3	1.16e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0097188_45	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0097188_45	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0097188_46	K01448	110.1	2.5e-32	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0097188_46	phrog_435	171.4	0	endolysin	lysis
UniRef90	UHGV-0097188_46	UniRef90_R5Z567	471.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0097188_46	411490.ANACAC_00597	189.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0097188_46	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0097188_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0097188_46	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097188_47	UniRef90_A0A3B8VZ83	50.8	0.000000144	Cell filamentation protein Fic (Fragment)	N/A
eggNOG-mapper	UHGV-0097188_47	411459.RUMOBE_02303	80.1	2.16e-17	COG COG2184 Protein involved in cell division	N/A
COG	UHGV-0097188_47	COG2184	N/A	N/A	Fido, protein-threonine AMPylation domain	N/A
UniRef90	UHGV-0097188_48	UniRef90_R5LBD3	132.0	1.93e-38	Fic family protein	N/A
eggNOG-mapper	UHGV-0097188_48	411459.RUMOBE_02303	134.0	1.29e-36	COG COG2184 Protein involved in cell division	N/A
COG	UHGV-0097188_48	COG2184	N/A	N/A	Fido, protein-threonine AMPylation domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0097188	Yes	30,018	35	76	1
UHGV-0221094	No	27,908	35	70	1
UHGV-2093740	No	15,194	34	39	1
UHGV-2078779	No	12,637	35	33	1