vOTU vOTU-020360

vOTU: vOTU-020360

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-020360
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vOTU-020360
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0383918
Biosample ID	N/A
Genome length (bp)	35,153 bps
CheckV completeness	87.28% (Medium-quality)
CDS count	56
CDS density	92.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265	Total connections	118	Host agreement	77.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0383918_1	UniRef90_A0A3E2WI44	98.6	8.29e-26	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0383918_1	742740.HMPREF9474_03521	99.8	4.85e-27	N/A	N/A
PHROG	UHGV-0383918_2	phrog_1129	67.2	1.8e-19	holin	lysis
UniRef90	UHGV-0383918_2	UniRef90_A0A2N0KEV2	144.0	3.30706e-43	Enolase	N/A
eggNOG-mapper	UHGV-0383918_2	742740.HMPREF9474_03522	139.0	5.2899e-42	N/A	N/A
Pfam	UHGV-0383918_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0383918_2	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_3	K11062	98.7	5.1e-29	entD; probable enterotoxin D	N/A
PHROG	UHGV-0383918_3	phrog_3088	175.4	0	amidase	lysis
UniRef90	UHGV-0383918_3	UniRef90_A0A174XN03	493.0	0	Putative N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0383918_3	1151292.QEW_0991	206.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0383918_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0383918_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0383918_3	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_4	K07727	55.5	0.0000000000000016	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0383918_4	UniRef90_UPI0012D8A0BE	125.0	1.85e-36	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0383918_4	742735.HMPREF9467_01735	88.2	1.91e-22	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0383918_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0383918_4	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0383918_4	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_7	K14059	78.2	1.6e-22	int; integrase	N/A
PHROG	UHGV-0383918_7	phrog_1	95.4	7.8e-28	integrase	integration and excision
UniRef90	UHGV-0383918_7	UniRef90_A0A174XEY3	755.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-0383918_7	478749.BRYFOR_05407	532.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0383918_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0383918_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0383918_7	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_8	phrog_7854	67.8	1.5e-19	endolysin	lysis
UniRef90	UHGV-0383918_8	UniRef90_UPI0003F93139	107.0	2.7e-25	N/A	N/A
eggNOG-mapper	UHGV-0383918_8	1304866.K413DRAFT_4757	88.6	9.8e-19	cell wall binding	N/A
Pfam	UHGV-0383918_8	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
PHROG	UHGV-0383918_10	phrog_7823	96.1	3.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0383918_10	33035.JPJF01000158_gene3562	119.0	7.59e-34	N/A	N/A
PHROG	UHGV-0383918_11	phrog_87	83.1	2.4e-24	metallo-protease	other
UniRef90	UHGV-0383918_11	UniRef90_A0A3R6LPT6	216.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0383918_11	411460.RUMTOR_02055	176.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0383918_11	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0383918_11	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0383918_11	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_12	K22299	41.9	0.000000000019	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0383918_12	phrog_8	62.5	9.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0383918_12	UniRef90_A0A417C2R0	207.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0383918_12	411460.RUMTOR_02056	132.0	1.04e-37	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0383918_12	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0383918_12	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0383918_12	PF12844,MF_00584,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_13	phrog_18248	56.3	4.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0383918_13	UniRef90_A0A3E3HWE5	103.0	7.41e-28	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0383918_13	574376.BAMA_16250	66.6	0.000000000000344	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0383918_13	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0383918_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0383918_13	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_14	phrog_31760	60.8	1.4e-17	N/A	unknown function
PHROG	UHGV-0383918_25	phrog_674	161.3	0	N/A	unknown function
UniRef90	UHGV-0383918_25	UniRef90_A0A3E2U708	318.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383918_25	1298920.KI911353_gene4871	283.0	0	N/A	N/A
Pfam	UHGV-0383918_25	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0383918_25	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_26	phrog_155	121.9	2.1e-36	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383918_26	UniRef90_UPI001A9A5EAC	311.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0383918_26	1304866.K413DRAFT_1196	223.0	0	ERF superfamily	N/A
Pfam	UHGV-0383918_26	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0383918_26	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
KOfam	UHGV-0383918_27	K03111	129.4	4.3e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0383918_27	phrog_44	125.3	5e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383918_27	UniRef90_UPI0011DCC330	258.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0383918_27	1304866.K413DRAFT_1332	231.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0383918_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0383918_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0383918_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0383918_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0383918_27	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_28	phrog_3490	145.5	2.29813e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383918_28	UniRef90_D3ASX5	343.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0383918_28	1298920.KI911353_gene4868	269.0	0	N/A	N/A
Pfam	UHGV-0383918_28	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0383918_28	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_29	K02316	67.8	1.7e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0383918_29	phrog_11992	140.7	1.10002e-41	N/A	unknown function
UniRef90	UHGV-0383918_29	UniRef90_A0A1C5TEL2	221.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0383918_29	1298920.KI911353_gene4867	149.0	1.42932e-43	CHC2 zinc finger	N/A
PADLOC	UHGV-0383918_29	drt-UG29	51.5	0.000000000000009	DRT	DRT
Pfam	UHGV-0383918_29	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0383918_29	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0383918_29	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_30	phrog_8841	463.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383918_30	UniRef90_A0A374PA98	1177.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383918_30	742738.HMPREF9460_02495	424.0	0	N/A	N/A
Pfam	UHGV-0383918_30	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0383918_30	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0383918_30	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383918_30	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383918_31	UniRef90_UPI0015E0AC01	62.0	0.00000000284	decarboxylase	N/A
eggNOG-mapper	UHGV-0383918_31	1304866.K413DRAFT_0822	91.3	5.9e-22	N/A	N/A
PHROG	UHGV-0383918_33	phrog_15077	276.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0383918_33	1298920.KI911353_gene4863	326.0	0	N/A	N/A
KOfam	UHGV-0383918_37	K06223	215.4	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0383918_37	phrog_56	167.4	0	DNA methyltransferase	other
UniRef90	UHGV-0383918_37	UniRef90_A0A174WGT9	569.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0383918_37	610130.Closa_0735	463.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0383918_37	MTase_II_00030	253.9	0	Type II methyltransferase	RM
Pfam	UHGV-0383918_37	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0383918_37	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0383918_37	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_38	K00558	195.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0383918_38	phrog_116	231.4	0	DNA methyltransferase	other
UniRef90	UHGV-0383918_38	UniRef90_E7GTS2	777.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0383918_38	742740.HMPREF9474_04317	777.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0383918_38	MTase_II_00020	95.6	3.7e-33	Type II methyltransferase	RM
Pfam	UHGV-0383918_38	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0383918_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0383918_38	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_39	phrog_25231	130.4	2.7e-39	N/A	unknown function
PHROG	UHGV-0383918_40	phrog_36	49.3	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0383918_40	UniRef90_UPI001D089637	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383918_40	1304866.K413DRAFT_3028	160.0	0	N/A	N/A
structural_annotation	UHGV-0383918_40	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_42	phrog_606	62.2	9.1e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0383918_42	UniRef90_UPI001D088AD3	211.0	0	DNA-packaging protein	N/A
Pfam	UHGV-0383918_42	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0383918_42	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0383918_43	K06909	95.3	7.4e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0383918_43	phrog_2	68.1	1.9e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0383918_43	UniRef90_A0A174NEI6	943.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0383918_43	1304866.K413DRAFT_0811	691.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0383918_43	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0383918_43	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_44	phrog_533	274.4	0	portal protein	head and packaging
UniRef90	UHGV-0383918_44	UniRef90_A0A174NM20	961.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0383918_44	1117108.PAALTS15_13582	556.0	0	N/A	N/A
structural_annotation	UHGV-0383918_44	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_45	phrog_581	279.5	0	minor head protein	head and packaging
UniRef90	UHGV-0383918_45	UniRef90_A0A174NEA4	718.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0383918_45	1298920.KI911353_gene4854	485.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0383918_45	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0383918_45	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383918_45	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_46	phrog_194	181.5	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0383918_46	UniRef90_A0A174NLQ6	331.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0383918_46	1273103.NM10_01074	139.0	1.3e-38	Phage minor structural protein GP20	N/A
Pfam	UHGV-0383918_46	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0383918_46	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_47	phrog_212	291.0	0	major head protein	head and packaging
UniRef90	UHGV-0383918_47	UniRef90_UPI001D004754	568.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0383918_47	1151292.QEW_2433	531.0	0	N/A	N/A
Pfam	UHGV-0383918_47	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0383918_47	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_48	phrog_15682	69.2	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0383918_48	1408823.AXUS01000024_gene2717	74.3	9.5e-17	N/A	N/A
PHROG	UHGV-0383918_49	phrog_541	88.6	5.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0383918_49	1298920.KI911353_gene4848	178.0	0	N/A	N/A
PHROG	UHGV-0383918_50	phrog_8710	144.0	3.40516e-43	N/A	unknown function
eggNOG-mapper	UHGV-0383918_50	1304866.K413DRAFT_0782	190.0	0	N/A	N/A
structural_annotation	UHGV-0383918_50	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_51	phrog_556	70.2	2.7e-20	minor head protein	head and packaging
UniRef90	UHGV-0383918_51	UniRef90_UPI001B0B5B54	143.0	6.82993e-42	minor capsid protein	N/A
eggNOG-mapper	UHGV-0383918_51	1298920.KI911353_gene4846	173.0	0	N/A	N/A
Pfam	UHGV-0383918_51	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-0383918_52	phrog_2595	98.2	6.2e-29	head-tail connector protein	connector
UniRef90	UHGV-0383918_52	UniRef90_UPI00045E84DA	202.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0383918_52	1298920.KI911353_gene4845	202.0	0	N/A	N/A
Pfam	UHGV-0383918_52	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0383918_52	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_53	phrog_820	112.9	2e-33	major tail protein	tail
eggNOG-mapper	UHGV-0383918_53	1298920.KI911353_gene4844	246.0	0	N/A	N/A
structural_annotation	UHGV-0383918_53	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_54	phrog_8300	102.8	1.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0383918_54	1298920.KI911353_gene4843	110.0	4.79e-30	N/A	N/A
structural_annotation	UHGV-0383918_54	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_55	phrog_8355	104.6	3.4e-31	N/A	unknown function
UniRef90	UHGV-0383918_55	UniRef90_A0A174NJB8	160.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0383918_55	1280692.AUJL01000027_gene2152	137.0	3.85e-40	N/A	N/A
Pfam	UHGV-0383918_55	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0383918_55	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0383918_56	phrog_1535	642.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0383918_56	UniRef90_A0A174NI32	1439.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0383918_56	1304866.K413DRAFT_0776	770.0	0	phage tail tape measure protein	N/A
COG	UHGV-0383918_56	COG5412	N/A	N/A	Phage-related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0383918	Yes	35,153	48	87	1
UHGV-0384056	No	27,319	49	67	1
UHGV-0289598	No	17,908	50	44	1
UHGV-1813006	No	14,926	50	38	1