vOTU vOTU-020396

vOTU: vOTU-020396

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-020396
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00659 → vOTU-020396
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0046024
Biosample ID	N/A
Genome length (bp)	28,021 bps
CheckV completeness	70.46% (Medium-quality)
CDS count	34
CDS density	86.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B	Total connections	331	Host agreement	99.4

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0046024_2	K03704	115.3	6.2e-34	cspA; cold shock protein	N/A
PHROG	UHGV-0046024_2	phrog_729	79.7	3.4e-23	cold shock protein	other
UniRef90	UHGV-0046024_2	UniRef90_R2MC62	130.0	1.66e-38	Cold shock protein 2	N/A
eggNOG-mapper	UHGV-0046024_2	1104325.M7W_2025	133.0	2.37999e-40	Cold shock	N/A
PADLOC	UHGV-0046024_2	retron_type_V_csd_cluster85_1	58.1	2e-16	N/A	Retron
Pfam	UHGV-0046024_2	PF00313	N/A	N/A	'Cold-shock' DNA-binding domain	CSD
COG	UHGV-0046024_2	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-0046024_2	PF00313,NF007062,COG1278	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_3	phrog_30113	148.0	6.16571e-44	N/A	unknown function
UniRef90	UHGV-0046024_3	UniRef90_UPI00033050BC	373.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_3	1158604.I591_00418	466.0	0	N/A	N/A
Pfam	UHGV-0046024_3	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0046024_3	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A
KOfam	UHGV-0046024_4	K01447	91.4	1.3e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0046024_4	phrog_2338	301.3	0	endolysin	lysis
UniRef90	UHGV-0046024_4	UniRef90_A0A377MS14	661.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0046024_4	1104325.M7W_2034	669.0	0	Ami_2	N/A
Pfam	UHGV-0046024_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0046024_4	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0046024_4	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_5	phrog_881	100.2	8.2e-30	holin	lysis
UniRef90	UHGV-0046024_5	UniRef90_A0A0V7Y5Y4	150.0	0	Holin	N/A
eggNOG-mapper	UHGV-0046024_5	565664.EFXG_03970	150.0	0	Putative phage holin Dp-1	N/A
Pfam	UHGV-0046024_5	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0046024_5	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_6	phrog_1009	96.4	1.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0046024_6	565664.EFXG_03971	61.6	0.0000000000404	N/A	N/A
PHROG	UHGV-0046024_7	phrog_1382	50.7	0.000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0046024_7	1140002.I570_03995	63.9	0.000000000000147	N/A	N/A
NCBIFam	UHGV-0046024_7	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0046024_7	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_8	phrog_1382	43.2	0.0000000000043	N/A	unknown function
NCBIFam	UHGV-0046024_8	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0046024_8	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_9	phrog_1536	106.0	3.3e-31	N/A	unknown function
UniRef90	UHGV-0046024_9	UniRef90_S4DEY7	127.0	1.72e-35	HsdM_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0046024_9	1260356.D920_01753	127.0	2.89e-36	N/A	N/A
PHROG	UHGV-0046024_10	phrog_10054	405.7	0	N/A	unknown function
UniRef90	UHGV-0046024_10	UniRef90_UPI00071BFEDE	980.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0046024_10	1158604.I591_00541	323.0	0	InterPro IPR018913 Domain of	N/A
Pfam	UHGV-0046024_10	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0046024_11	phrog_11663	177.6	0	minor head protein	head and packaging
UniRef90	UHGV-0046024_11	UniRef90_C9BWV7	498.0	0	Predicted protein	N/A
eggNOG-mapper	UHGV-0046024_11	565664.EFXG_01758	499.0	0	N/A	N/A
KOfam	UHGV-0046024_12	K03651	49.6	0.000000000000059	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0046024_12	phrog_7158	469.9	0	N/A	unknown function
UniRef90	UHGV-0046024_12	UniRef90_C9BWV6	1191.0	0	Predicted protein	N/A
eggNOG-mapper	UHGV-0046024_12	565664.EFXG_01759	1176.0	0	N/A	N/A
Pfam	UHGV-0046024_12	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0046024_12	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
structural_annotation	UHGV-0046024_12	PF10651,PF14582,MF_00905,NF008359,COG1409	N/A	N/A	N/A	N/A
KOfam	UHGV-0046024_13	K19304	138.9	2.79993e-41	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0046024_13	phrog_1067	786.5	0	minor head protein	head and packaging
UniRef90	UHGV-0046024_13	UniRef90_UPI001020A53A	1856.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0046024_13	565664.EFXG_01178	1580.0	0	heme binding	N/A
Pfam	UHGV-0046024_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0046024_13	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0046024_13	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
NCBIFam	UHGV-0046024_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0046024_13	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0046024_13	PF14594,PF01551,PF18013,TIGR01665,NF040883,COG4926,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_14	phrog_5163	87.0	1.3e-25	minor tail protein	tail
UniRef90	UHGV-0046024_14	UniRef90_A0A0M2B121	455.0	0	Phage tail component protein	N/A
eggNOG-mapper	UHGV-0046024_14	565664.EFXG_01177	497.0	0	Phage tail protein	N/A
Pfam	UHGV-0046024_14	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0046024_14	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0046024_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0046024_14	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_15	phrog_1533	511.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0046024_15	UniRef90_A0A829A1W7	963.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0046024_15	565664.EFXG_01176	942.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0046024_15	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0046024_15	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0046024_15	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0046024_15	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_16	phrog_441	97.2	2e-28	tail assembly chaperone	tail
UniRef90	UHGV-0046024_16	UniRef90_A0A7U8IL94	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_16	565664.EFXG_01175	184.0	0	N/A	N/A
PHROG	UHGV-0046024_17	phrog_183	87.2	2e-25	tail chaperone protein	tail
UniRef90	UHGV-0046024_17	UniRef90_UPI001A8DA6DF	152.0	1.4013e-45	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0046024_17	565664.EFXG_01174	220.0	0	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0046024_17	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0046024_17	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_18	phrog_238	209.0	0	major tail protein	tail
UniRef90	UHGV-0046024_18	UniRef90_A0A0M2B0N7	320.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0046024_18	565664.EFXG_01173	318.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0046024_18	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0046024_18	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0046024_18	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_19	phrog_176	119.9	1.3e-35	tail terminator	connector
UniRef90	UHGV-0046024_19	UniRef90_UPI000A339243	222.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0046024_19	565664.EFXG_01172	258.0	0	N/A	N/A
structural_annotation	UHGV-0046024_19	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_20	phrog_5	90.6	2.2e-26	tail completion or Neck1 protein	connector
UniRef90	UHGV-0046024_20	UniRef90_A0A132P7U7	212.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0046024_20	565664.EFXG_01171	126.0	4.87e-36	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0046024_20	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0046024_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0046024_20	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_21	phrog_348	110.0	1.3e-32	minor head protein	head and packaging
UniRef90	UHGV-0046024_21	UniRef90_A0A0V8CX26	140.0	3.50002e-41	N/A	N/A
eggNOG-mapper	UHGV-0046024_21	565664.EFXG_01170	210.0	0	N/A	N/A
structural_annotation	UHGV-0046024_21	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_22	phrog_132	88.1	7.6e-26	head-tail adaptor	connector
UniRef90	UHGV-0046024_22	UniRef90_UPI001921F8BF	171.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0046024_22	565664.EFXG_01169	222.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0046024_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0046024_22	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_23	phrog_29	227.1	0	major head protein	head and packaging
UniRef90	UHGV-0046024_23	UniRef90_A0A7U8FUB5	630.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_23	565664.EFXG_01167	630.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0046024_23	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0046024_23	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_24	phrog_909	111.9	3e-33	major head protein	head and packaging
UniRef90	UHGV-0046024_24	UniRef90_A0A7U8FVR7	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_24	565664.EFXG_01166	228.0	0	N/A	N/A
PHROG	UHGV-0046024_25	phrog_172	116.3	3.3e-34	head scaffolding protein	head and packaging
UniRef90	UHGV-0046024_25	UniRef90_A0A7Z0M130	286.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_25	565664.EFXG_01165	291.0	0	N/A	N/A
Pfam	UHGV-0046024_25	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0046024_25	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046024_26	PF02100	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_28	phrog_115	312.6	0	minor head protein	head and packaging
UniRef90	UHGV-0046024_28	UniRef90_A0A7T9W8C3	560.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0046024_28	565664.EFXG_01162	561.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0046024_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0046024_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0046024_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046024_28	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_29	phrog_8208	57.3	3.4e-16	N/A	unknown function
PHROG	UHGV-0046024_30	phrog_64	403.6	0	portal protein	head and packaging
UniRef90	UHGV-0046024_30	UniRef90_A0A7U8IK40	1039.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0046024_30	565664.EFXG_01159	1039.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0046024_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0046024_30	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0046024_30	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0046024_31	K06909	381.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0046024_31	phrog_3717	211.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0046024_31	UniRef90_A0A022N9V5	819.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0046024_31	565664.EFXG_01158	878.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0046024_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0046024_31	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0046024_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0046024_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0046024_31	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0046024_31	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0046024_32	K07474	73.0	8.9e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0046024_32	phrog_51	89.3	5.2e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0046024_32	UniRef90_J6Z1D2	288.0	0	Putative terminase small subunit	N/A
eggNOG-mapper	UHGV-0046024_32	565664.EFXG_01157	290.0	0	Terminase small subunit	N/A
Pfam	UHGV-0046024_32	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0046024_32	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0046024_32	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0046024_33	phrog_5859	96.9	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0046024_33	1201292.DR75_1513	54.3	0.0000000185	N/A	N/A
PHROG	UHGV-0046024_34	phrog_918	104.6	4.3e-31	N/A	unknown function
UniRef90	UHGV-0046024_34	UniRef90_UPI0013D7DEC2	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046024_34	1260356.D920_00086	115.0	1.57e-32	N/A	N/A
Pfam	UHGV-0046024_34	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0046024_34	PF19791	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0046024	Yes	28,021	38	70	1
UHGV-1466310	No	20,263	39	51	1
UHGV-0247554	No	15,210	39	39	1
UHGV-1733149	No	14,037	39	36	1
UHGV-1741814	No	14,037	39	36	1