vOTU vOTU-020533

vOTU: vOTU-020533

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-020533
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00167 → vOTU-020533
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1496947
Biosample ID	SAMEA3182098
Genome length (bp)	43,652 bps
CheckV completeness	76.50% (Medium-quality)
CDS count	66
CDS density	86.14%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	4268	Host agreement	89.76
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 76.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1496947_1	K24213	50.4	0.000000000000025	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1496947_1	phrog_4433	89.4	4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1496947_1	886882.PPSC2_p0363	107.0	2.12e-24	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-1496947_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1496947_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-1496947_2	K19171	114.1	1.3e-33	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1496947_2	phrog_77	202.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496947_2	UniRef90_A0A8D9PGW5	1141.0	0	Chromosome partition protein	N/A
eggNOG-mapper	UHGV-1496947_2	1298920.KI911353_gene2731	292.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1496947_2	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1496947_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1496947_2	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1496947_4	K03111	55.7	7.4e-19	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1496947_4	phrog_26861	122.0	3.3e-36	N/A	unknown function
UniRef90	UHGV-1496947_4	UniRef90_A0A8D9PGK1	404.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1496947_4	515620.EUBELI_01590	243.0	0	N/A	N/A
Pfam	UHGV-1496947_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1496947_4	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1496947_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1496947_4	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_5	UniRef90_A0A8D9UIQ5	193.0	0	Sporulation initiation factor	N/A
Pfam	UHGV-1496947_5	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
structural_annotation	UHGV-1496947_5	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1496947_6	K01449	71.0	2.2e-20	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1496947_6	phrog_14642	42.4	0.0000000000081	endolysin	lysis
UniRef90	UHGV-1496947_6	UniRef90_A0A8D9PGU7	347.0	0	Cell Wall Hydrolase	N/A
eggNOG-mapper	UHGV-1496947_6	742733.HMPREF9469_00034	92.0	9.91e-21	Cell Wall Hydrolase	N/A
Pfam	UHGV-1496947_6	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-1496947_6	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-1496947_6	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_7	phrog_463	212.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-1496947_7	UniRef90_A0A8D9PGL6	451.0	0	P22_AR protein	N/A
eggNOG-mapper	UHGV-1496947_7	596329.HMPREF0631_1352	169.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-1496947_7	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1496947_7	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1496947_7	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1496947_7	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_10	UniRef90_A0A8D9UIR6	132.0	5.86e-39	DNA-binding transcriptional regulator	N/A
eggNOG-mapper	UHGV-1496947_10	1121335.Clst_0370	93.2	2.16e-24	N/A	N/A
structural_annotation	UHGV-1496947_10	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1496947_11	K22300	61.0	2.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1496947_11	phrog_8	77.7	2.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1496947_11	UniRef90_A0A8D9UIK2	233.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1496947_11	445974.CLORAM_02966	84.7	1.74e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1496947_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1496947_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1496947_11	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1496947_13	K07273	152.2	4.2039e-45	acm; lysozyme	N/A
PHROG	UHGV-1496947_13	phrog_291	141.8	6.00036e-42	endolysin	lysis
UniRef90	UHGV-1496947_13	UniRef90_A0A8D9UIP9	828.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1496947_13	411470.RUMGNA_00451	193.0	0	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-1496947_13	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1496947_13	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1496947_13	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_15	phrog_2566	51.1	0.000000000000019	N/A	unknown function
PHROG	UHGV-1496947_16	phrog_16267	126.9	0	N/A	unknown function
UniRef90	UHGV-1496947_16	UniRef90_A0A8D9PGP3	1741.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1496947_16	1294142.CINTURNW_1706	243.0	0	Phage minor structural protein	N/A
COG	UHGV-1496947_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1496947_16	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_17	phrog_1401	53.9	0.0000000000000029	N/A	unknown function
structural_annotation	UHGV-1496947_17	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_18	phrog_1194	59.4	5.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1496947_18	1232453.BAIF02000058_gene1638	60.1	0.000000000567	N/A	N/A
structural_annotation	UHGV-1496947_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_19	phrog_130	112.2	5.4e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1496947_19	UniRef90_A0A8D9PG17	384.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-1496947_19	658655.HMPREF0988_00912	248.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1496947_19	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1496947_19	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1496947_19	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1496947_19	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1496947_20	PF07875	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_21	UniRef90_UPI00174DD543	59.3	0.000000000221	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-1496947_21	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_22	UniRef90_A0A8D9UIV6	233.0	0	RNAse domain protein	N/A
UniRef90	UHGV-1496947_23	UniRef90_A0A8D9UIY0	375.0	0	N/A	N/A
eggNOG-mapper	UHGV-1496947_23	1121115.AXVN01000171_gene912	58.9	0.000000148	N/A	N/A
Pfam	UHGV-1496947_23	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-1496947_23	PF16729,TIGR04087,COG3353	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_24	phrog_28918	159.0	0	N/A	unknown function
UniRef90	UHGV-1496947_24	UniRef90_A0A2H4J4V9	88.2	0.0000000000000625	Putative Tmp	N/A
eggNOG-mapper	UHGV-1496947_24	1298920.KI911353_gene2649	312.0	0	tape measure	N/A
COG	UHGV-1496947_24	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1496947_26	phrog_36112	68.0	9.6e-20	N/A	unknown function
UniRef90	UHGV-1496947_26	UniRef90_A0A8D9PG71	303.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1496947_26	1298920.KI911353_gene2651	119.0	5.5e-32	N/A	N/A
structural_annotation	UHGV-1496947_26	PF16478	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_28	UniRef90_A0A8D9PGN2	302.0	0	Major tail protein	N/A
structural_annotation	UHGV-1496947_28	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1496947_29	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1496947_30	1298920.KI911353_gene2654	184.0	0	N/A	N/A
AcrCatalog	UHGV-1496947_30	cluster_24841	89.0	2.82e-24	NA	N/A
eggNOG-mapper	UHGV-1496947_31	1298920.KI911353_gene2656	60.8	0.00000000105	N/A	N/A
structural_annotation	UHGV-1496947_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_32	phrog_1129	75.3	5.2e-22	holin	lysis
UniRef90	UHGV-1496947_32	UniRef90_A0A8D9UII9	165.0	0	Holin	N/A
eggNOG-mapper	UHGV-1496947_32	411461.DORFOR_00721	105.0	1.14e-28	N/A	N/A
Pfam	UHGV-1496947_32	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1496947_32	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_33	phrog_1863	51.7	0.0000000000000058	N/A	unknown function
eggNOG-mapper	UHGV-1496947_33	1232452.BAIB02000007_gene1606	54.3	0.000000304	N/A	N/A
eggNOG-mapper	UHGV-1496947_34	397290.C810_01402	68.2	0.000000000000395	N/A	N/A
UniRef90	UHGV-1496947_35	UniRef90_A0A8D9UIY7	174.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1496947_35	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_36	phrog_544	277.0	0	major head protein	head and packaging
UniRef90	UHGV-1496947_36	UniRef90_A0A8D9PGL1	636.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1496947_36	608534.GCWU000341_02293	332.0	0	N/A	N/A
NCBIFam	UHGV-1496947_36	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1496947_36	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_38	phrog_64	135.8	2.2e-40	portal protein	head and packaging
UniRef90	UHGV-1496947_38	UniRef90_A0A8D9PG58	1045.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1496947_38	397290.C810_01397	459.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1496947_38	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1496947_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_39	phrog_36	62.6	7.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1496947_39	UniRef90_A0A352SH29	85.9	2.82e-19	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1496947_39	97138.C820_00772	68.6	0.000000000000818	sigma factor activity	N/A
Pfam	UHGV-1496947_39	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1496947_39	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1496947_39	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_40	phrog_38	143.4	1.49939e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1496947_40	UniRef90_A0A8D9UIV2	1058.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1496947_40	397290.C810_01390	682.0	0	chromosome segregation	N/A
Pfam	UHGV-1496947_40	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1496947_40	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1496947_40	PF17289,PF03237,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_41	phrog_2316	59.6	6.4e-17	N/A	unknown function
UniRef90	UHGV-1496947_41	UniRef90_A0A3E4YBW5	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-1496947_41	1280676.AUJO01000024_gene3262	67.8	0.000000000000141	N/A	N/A
Pfam	UHGV-1496947_41	PF16475	N/A	N/A	N/A	DUF5052
structural_annotation	UHGV-1496947_41	PF16475,MF_00436,NF033216,COG1923	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_44	UniRef90_A0A8D9PG29	76.3	2.6e-16	Acetyl-coA carboxylase zinc finger domain protein	N/A
UniRef90	UHGV-1496947_47	UniRef90_A0A8D9PGW1	133.0	1.33e-39	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1496947_47	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_48	phrog_22444	82.5	3.9e-24	N/A	unknown function
UniRef90	UHGV-1496947_48	UniRef90_UPI001CC2634F	148.0	4.36e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1496947_48	1121422.AUMW01000042_gene1260	157.0	1.42932e-42	DnaD domain protein	N/A
COG	UHGV-1496947_48	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1496947_48	PF07106,NF040642,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_50	phrog_236	100.5	3.1e-29	nucleotide kinase	other
UniRef90	UHGV-1496947_50	UniRef90_A0A8D9PGN7	259.0	0	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1496947_50	1123263.AUKY01000015_gene1590	86.3	1.27e-20	N/A	N/A
Pfam	UHGV-1496947_50	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1496947_50	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_51	phrog_229	107.9	4.2e-32	MazG-like pyrophosphatase	other
UniRef90	UHGV-1496947_51	UniRef90_R6C0D1	249.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1496947_51	428125.CLOLEP_01391	102.0	3.37e-26	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1496947_51	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1496947_51	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1496947_51	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
UniRef90	UHGV-1496947_52	UniRef90_A0A8D9UIS5	408.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1496947_52	658655.HMPREF0988_00895	88.2	2.57e-19	N/A	N/A
eggNOG-mapper	UHGV-1496947_55	658655.HMPREF0988_00903	48.5	0.00000105	N/A	N/A
PHROG	UHGV-1496947_58	phrog_99	59.7	7.8e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1496947_58	UniRef90_A0A8D9UIN0	458.0	0	Ethylene-responsive transcription factor	N/A
eggNOG-mapper	UHGV-1496947_58	927704.SELR_12480	69.7	0.0000000000516	N/A	N/A
structural_annotation	UHGV-1496947_58	PF18337,PF00847	N/A	N/A	N/A	N/A
KOfam	UHGV-1496947_59	K19090	138.5	5.10003e-41	cas5t; CRISPR-associated protein Cas5t	N/A
UniRef90	UHGV-1496947_59	UniRef90_UPI0015707911	149.0	6.68994e-41	CRISPR-associated protein Cas5	N/A
eggNOG-mapper	UHGV-1496947_59	1128398.Curi_c06220	103.0	3.73e-24	CRISPR-associated protein (Cas_Cas5)	N/A
PADLOC	UHGV-1496947_59	cas_Cas5t	84.6	2.2e-24	CRISPR-associated protein Cas5, subtype I-B/TNEAP	CRISPR-CAS
COG	UHGV-1496947_59	COG1688	N/A	N/A	CRISPR/Cas system-associated protein Cas5, RAMP superfamily	N/A
structural_annotation	UHGV-1496947_59	PF09704,TIGR01895,COG1688	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_61	phrog_1233	60.4	3.3e-17	N/A	unknown function
UniRef90	UHGV-1496947_61	UniRef90_A0A345BPX6	86.7	6.02e-20	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1496947_61	658655.HMPREF0988_00914	95.1	5.2e-24	N/A	N/A
eggNOG-mapper	UHGV-1496947_62	658655.HMPREF0988_00915	109.0	6.61e-27	N/A	N/A
PHROG	UHGV-1496947_63	phrog_20016	226.3	0	N/A	unknown function
UniRef90	UHGV-1496947_63	UniRef90_A0A285PT46	160.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1496947_63	397290.C810_05214	232.0	0	N/A	N/A
structural_annotation	UHGV-1496947_63	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1496947_64	phrog_16490	187.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1496947_64	397290.C810_01328	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-1496947_65	658655.HMPREF0988_00918	82.4	7.48e-20	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1496947	Yes	43,652	37	77	1
UHGV-1411884	No	43,444	37	76	1
UHGV-0302969	No	41,353	37	73	1
UHGV-1502126	No	35,326	37	62	1