vOTU vOTU-020715

vOTU: vOTU-020715

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-020715
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vOTU-020715
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Butyricicoccaceae → Butyricicoccus → Butyricicoccus pullicaecorum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0383216
Biosample ID	N/A
Genome length (bp)	24,036 bps
CheckV completeness	62.80% (Medium-quality)
CDS count	35
CDS density	96.27%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Butyricicoccaceae → Butyricicoccus → Butyricicoccus pullicaecorum	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Butyricicoccaceae → Butyricicoccus → Butyricicoccus pullicaecorum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0383216_1	K06223	167.2	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0383216_1	phrog_56	155.3	0	DNA methyltransferase	other
UniRef90	UHGV-0383216_1	UniRef90_A0A1Y4KZI8	346.0	0	DNA methylase	N/A
eggNOG-mapper	UHGV-0383216_1	1410653.JHVC01000013_gene3657	226.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0383216_1	MTase_II_00039	133.6	3e-39	Type II methyltransferase	RM
Pfam	UHGV-0383216_1	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0383216_1	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0383216_1	PF02086,TIGR00571,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-0383216_2	K07273	209.0	0	acm; lysozyme	N/A
PHROG	UHGV-0383216_2	phrog_291	177.3	0	endolysin	lysis
UniRef90	UHGV-0383216_2	UniRef90_A0A3C1H1P0	166.0	0	Glycoside hydrolase	N/A
eggNOG-mapper	UHGV-0383216_2	1203606.HMPREF1526_01360	501.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0383216_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0383216_2	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
UniRef90	UHGV-0383216_3	UniRef90_A0A1Y4S1L5	120.0	2.7e-32	Spo0A_C domain-containing protein	N/A
PHROG	UHGV-0383216_5	phrog_1863	67.1	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0383216_5	1203606.HMPREF1526_02027	107.0	7.4e-30	N/A	N/A
PHROG	UHGV-0383216_6	phrog_27545	157.3	0	N/A	unknown function
UniRef90	UHGV-0383216_6	UniRef90_D1PRE7	55.1	0.00000268	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-0383216_6	1203606.HMPREF1526_00344	372.0	0	N/A	N/A
KOfam	UHGV-0383216_7	K06882	51.5	0.0000000000000069	N/A	N/A
PHROG	UHGV-0383216_7	phrog_10993	329.1	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0383216_7	UniRef90_R8W1A3	788.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_7	1203606.HMPREF1526_01356	788.0	0	cell wall binding repeat	N/A
Pfam	UHGV-0383216_7	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0383216_7	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0383216_7	PF19789,PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_8	phrog_7037	132.6	4.3e-39	tail fiber protein	tail
UniRef90	UHGV-0383216_8	UniRef90_UPI00195EB260	60.8	0.000000233	phage tail protein	N/A
eggNOG-mapper	UHGV-0383216_8	1203606.HMPREF1526_01355	458.0	0	N/A	N/A
structural_annotation	UHGV-0383216_8	PF12571	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_9	phrog_521	94.0	1.5e-27	tail protein	tail
UniRef90	UHGV-0383216_9	UniRef90_A0A8J6J728	95.5	3.12e-21	YmfQ family protein	N/A
eggNOG-mapper	UHGV-0383216_9	1203606.HMPREF1526_00341	127.0	3.32e-34	N/A	N/A
Pfam	UHGV-0383216_9	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-0383216_9	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-0383216_9	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_10	phrog_6	217.5	0	baseplate protein	tail
UniRef90	UHGV-0383216_10	UniRef90_A0A1Y4LPA0	655.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_10	1121334.KB911073_gene1870	279.0	0	baseplate J-like protein	N/A
Pfam	UHGV-0383216_10	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0383216_10	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383216_10	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_11	phrog_120	68.6	7.4e-20	baseplate protein	tail
UniRef90	UHGV-0383216_11	UniRef90_UPI0006C7E644	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0383216_11	756499.Desde_4123	139.0	1.23999e-40	N/A	N/A
Pfam	UHGV-0383216_11	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-0383216_11	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-0383216_11	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
Pfam	UHGV-0383216_12	PF10844	N/A	N/A	N/A	DUF2577
PHROG	UHGV-0383216_13	phrog_400	228.7	0	tail protein	tail
UniRef90	UHGV-0383216_13	UniRef90_A0A7S7J193	235.0	0	Alpha/beta hydrolase	N/A
eggNOG-mapper	UHGV-0383216_13	1291050.JAGE01000001_gene2933	239.0	0	NLP P60 protein	N/A
COG	UHGV-0383216_13	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0383216_13	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0383216_14	K22409	44.9	0.0000000000012	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0383216_14	phrog_380	144.5	5.70328e-43	endolysin	lysis
UniRef90	UHGV-0383216_14	UniRef90_A0A1Y4LLY0	437.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_14	1121334.KB911073_gene1867	182.0	0	Lysin motif	N/A
Pfam	UHGV-0383216_14	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0383216_14	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-0383216_14	PF21821,PF05489,TIGR02126,TIGR02899,COG3499,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_15	phrog_33570	373.0	0	N/A	unknown function
UniRef90	UHGV-0383216_15	UniRef90_A0A1Y4L2R3	988.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_15	1291050.JAGE01000001_gene2931	395.0	0	tape measure	N/A
Pfam	UHGV-0383216_15	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0383216_15	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0383216_15	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0383216_15	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_16	phrog_389	52.3	4e-19	tail protein XkdN-like	tail
UniRef90	UHGV-0383216_16	UniRef90_UPI00067FC4CD	82.8	6.62e-18	XkdN	N/A
eggNOG-mapper	UHGV-0383216_16	568816.Acin_1967	52.8	0.000000479	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0383216_16	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-0383216_16	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_17	phrog_365	148.2	2.66247e-44	tail protein	tail
UniRef90	UHGV-0383216_17	UniRef90_A0A1Y4LLU7	279.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0383216_17	1297617.JPJD01000034_gene681	169.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0383216_17	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-0383216_17	PF09393,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_18	phrog_1480	417.6	0	tail sheath	tail
UniRef90	UHGV-0383216_18	UniRef90_A0A8J6JFP4	370.0	0	Phage tail sheath subtilisin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_18	1297617.JPJD01000034_gene682	363.0	0	Phage tail sheath protein subtilisin-like domain	N/A
Pfam	UHGV-0383216_18	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0383216_18	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-0383216_18	PF10758,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_19	phrog_525	40.2	0.000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0383216_19	1121334.KB911073_gene1863	52.4	0.00000231	N/A	N/A
Pfam	UHGV-0383216_19	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-0383216_19	PF20765,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0383216_20	1291050.JAGE01000001_gene2925	80.1	9.08e-17	N/A	N/A
structural_annotation	UHGV-0383216_20	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_21	phrog_29848	99.7	1.3e-29	N/A	unknown function
UniRef90	UHGV-0383216_21	UniRef90_UPI0018989B1A	139.0	5.78e-38	head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0383216_21	1121334.KB911073_gene1861	139.0	6.09e-39	N/A	N/A
structural_annotation	UHGV-0383216_21	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_22	phrog_40	57.0	2.6e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-0383216_22	UniRef90_A0A844A7Y2	63.2	0.0000000000483	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0383216_22	266779.Meso_1889	58.2	0.000000000818	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0383216_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0383216_22	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0383216_22	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_23	phrog_10	172.0	0	major head protein	head and packaging
UniRef90	UHGV-0383216_23	UniRef90_A0A1Y4L322	753.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0383216_23	315749.Bcer98_2593	221.0	0	capsid protein	N/A
Pfam	UHGV-0383216_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0383216_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0383216_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0383216_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0383216_24	K01358	95.5	7.7e-28	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0383216_24	phrog_94	142.2	5.70048e-42	head maturation protease	head and packaging
UniRef90	UHGV-0383216_24	UniRef90_A0A1Y4L2P7	446.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0383216_24	1423780.LOT_2185	98.2	4.54e-22	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0383216_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0383216_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0383216_24	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_25	phrog_12	314.5	0	portal protein	head and packaging
UniRef90	UHGV-0383216_25	UniRef90_A0A1Y4L2Q1	797.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0383216_25	1120971.AUCA01000066_gene593	243.0	0	Phage portal protein	N/A
Pfam	UHGV-0383216_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0383216_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0383216_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0383216_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0383216_27	phrog_2699	168.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0383216_27	UniRef90_T0UAP1	134.0	3.84e-32	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0383216_27	693746.OBV_20000	390.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0383216_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0383216_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
PHROG	UHGV-0383216_28	phrog_9	138.3	5.99994e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0383216_28	UniRef90_A0A7C6KLY5	215.0	0	Terminase large subunit (Fragment)	N/A
eggNOG-mapper	UHGV-0383216_28	693746.OBV_20000	435.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0383216_28	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
COG	UHGV-0383216_28	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
PHROG	UHGV-0383216_31	phrog_83	68.8	8.9e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0383216_31	UniRef90_UPI0013EF20CD	122.0	1.83e-32	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0383216_31	1501230.ET33_21205	68.9	0.00000000000203	Phage terminase, small subunit	N/A
Pfam	UHGV-0383216_31	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0383216_31	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0383216_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0383216_32	K07451	45.6	0.0000000000013	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0383216_32	phrog_144	94.9	7.3e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383216_32	UniRef90_A0A1Y4LP82	256.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0383216_32	742738.HMPREF9460_00869	165.0	0	HNH endonuclease	N/A
Pfam	UHGV-0383216_32	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0383216_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0383216_32	PF01844,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383216_34	UniRef90_UPI000708FEF7	52.4	0.000000205	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0383216_34	1235835.C814_02704	50.8	0.000000149	Cysteine-rich KTR	N/A
Pfam	UHGV-0383216_34	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-0383216_35	phrog_3584	174.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0383216_35	1203606.HMPREF1526_00985	492.0	0	N/A	N/A
structural_annotation	UHGV-0383216_35	PF01446,NF041486	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0383216	Yes	24,036	59	63	1
UHGV-0463728	No	22,889	60	61	1
UHGV-0427099	No	18,949	61	50	1
UHGV-0392348	No	14,040	59	36	1